RNA–Protein interactions for RNA: ENST00000482401.6

CAPN8-209, Transcript of calpain 8, humanhuman

TSL 2

Gene CAPN8, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-209ENST00000482401 EIF4A2Q14240 407 aaKnown RBP19.04■□□□□ 0.64
CAPN8-209ENST00000482401 ATG3Q9NT62 314 aa19.04■□□□□ 0.64
CAPN8-209ENST00000482401 TNNT2P45379 298 aaPredicted RBP19.03■□□□□ 0.64
CAPN8-209ENST00000482401 ITPK1Q13572 414 aa19.03■□□□□ 0.64
CAPN8-209ENST00000482401 TRAPPC3LQ5T215 181 aa19.03■□□□□ 0.64
CAPN8-209ENST00000482401 RTCBQ9Y3I0 505 aaKnown RBP19.03■□□□□ 0.64
CAPN8-209ENST00000482401 PLEKHO1Q53GL0 409 aaPredicted RBP19.02■□□□□ 0.64
CAPN8-209ENST00000482401 SMIM5Q71RC9 77 aa19.02■□□□□ 0.64
CAPN8-209ENST00000482401 DCAF5Q96JK2 942 aa19.02■□□□□ 0.64
CAPN8-209ENST00000482401 ADRA2BP18089 450 aa19.01■□□□□ 0.63
CAPN8-209ENST00000482401 RC3H1Q5TC82 1133 aaKnown RBP19.01■□□□□ 0.63
CAPN8-209ENST00000482401 NLGN1Q8N2Q7 840 aa19.01■□□□□ 0.63
CAPN8-209ENST00000482401 MMP10P09238 476 aa19■□□□□ 0.63
CAPN8-209ENST00000482401 AMOTQ4VCS5 1084 aa19■□□□□ 0.63
CAPN8-209ENST00000482401 ADCY9O60503 1353 aa19■□□□□ 0.63
CAPN8-209ENST00000482401 TGFB2P61812 414 aa18.99■□□□□ 0.63
CAPN8-209ENST00000482401 RBM42Q9BTD8 480 aaKnown RBP18.99■□□□□ 0.63
CAPN8-209ENST00000482401 EIF4G2P78344 907 aaKnown RBP eCLIP18.98■□□□□ 0.63
CAPN8-209ENST00000482401 ZNF526Q8TF50 670 aaPredicted RBP18.98■□□□□ 0.63
CAPN8-209ENST00000482401 RFC4P35249 363 aa18.97■□□□□ 0.63
CAPN8-209ENST00000482401 CABP4P57796 275 aa18.97■□□□□ 0.63
CAPN8-209ENST00000482401 PANK3Q9H999 370 aa18.97■□□□□ 0.63
CAPN8-209ENST00000482401 C1orf141Q5JVX7 400 aa18.96■□□□□ 0.63
CAPN8-209ENST00000482401 ZNF530Q6P9A1 599 aaPredicted RBP18.96■□□□□ 0.63
CAPN8-209ENST00000482401 CCDC87Q9NVE4 849 aa18.96■□□□□ 0.63
CAPN8-209ENST00000482401 WWC3Q9ULE0 1092 aa18.96■□□□□ 0.63
CAPN8-209ENST00000482401 CNTNAP4Q9C0A0 1308 aa18.96■□□□□ 0.63
CAPN8-209ENST00000482401 ZNF831Q5JPB2 1677 aa18.95■□□□□ 0.62
CAPN8-209ENST00000482401 KDRP35968 1356 aa18.95■□□□□ 0.62
CAPN8-209ENST00000482401 RPS6KA4O75676 772 aa18.95■□□□□ 0.62
CAPN8-209ENST00000482401 HSPA6P17066 643 aa18.95■□□□□ 0.62
CAPN8-209ENST00000482401 MTHFSP49914 203 aa18.95■□□□□ 0.62
CAPN8-209ENST00000482401 MORC1Q86VD1 984 aa18.94■□□□□ 0.62
CAPN8-209ENST00000482401 ARHGEF1Q92888 912 aaKnown RBP18.94■□□□□ 0.62
CAPN8-209ENST00000482401 PARP3Q9Y6F1 533 aa18.94■□□□□ 0.62
CAPN8-209ENST00000482401 SLC4A9Q96Q91 983 aa18.93■□□□□ 0.62
CAPN8-209ENST00000482401 BCS1LQ9Y276 419 aa18.92■□□□□ 0.62
CAPN8-209ENST00000482401 PXDNLA1KZ92 1463 aa18.91■□□□□ 0.62
CAPN8-209ENST00000482401 A0A0G2JLW4 131 aa18.91■□□□□ 0.62
CAPN8-209ENST00000482401 HSPA5P11021 654 aaKnown RBP18.91■□□□□ 0.62
CAPN8-209ENST00000482401 GYS1P13807 737 aa18.91■□□□□ 0.62
CAPN8-209ENST00000482401 CICQ96RK0 1608 aaPredicted RBP18.9■□□□□ 0.62
CAPN8-209ENST00000482401 KNSTRNQ9Y448 316 aa18.9■□□□□ 0.62
CAPN8-209ENST00000482401 KIF13BQ9NQT8 1826 aa18.9■□□□□ 0.62
CAPN8-209ENST00000482401 PTCD1O75127 700 aaKnown RBP18.89■□□□□ 0.61
CAPN8-209ENST00000482401 IFFO2Q5TF58 517 aa18.89■□□□□ 0.61
CAPN8-209ENST00000482401 ARHGAP27Q6ZUM4 889 aa18.89■□□□□ 0.61
CAPN8-209ENST00000482401 NFATC2IPQ8NCF5 419 aa18.89■□□□□ 0.61
CAPN8-209ENST00000482401 KDM6AO15550 1401 aaPredicted RBP18.89■□□□□ 0.61
CAPN8-209ENST00000482401 C10orf71Q711Q0 1435 aa18.89■□□□□ 0.61
CAPN8-209ENST00000482401 KIF3CO14782 793 aa18.88■□□□□ 0.61
CAPN8-209ENST00000482401 FCHSD2O94868 740 aa18.88■□□□□ 0.61
CAPN8-209ENST00000482401 SULT6B1Q6IMI4 303 aa18.88■□□□□ 0.61
CAPN8-209ENST00000482401 DPEP1P16444 411 aa18.87■□□□□ 0.61
CAPN8-209ENST00000482401 COL5A3P25940 1745 aaPredicted RBP18.87■□□□□ 0.61
CAPN8-209ENST00000482401 CRKLP46109 303 aaKnown RBP18.87■□□□□ 0.61
CAPN8-209ENST00000482401 AEBP1Q8IUX7 1158 aa18.86■□□□□ 0.61
CAPN8-209ENST00000482401 C4AP0C0L4 1744 aa18.86■□□□□ 0.61
CAPN8-209ENST00000482401 AKAP4Q5JQC9 854 aa18.85■□□□□ 0.61
CAPN8-209ENST00000482401 PIM2Q9P1W9 311 aa18.85■□□□□ 0.61
CAPN8-209ENST00000482401 N4BP2Q86UW6 1770 aaPredicted RBP18.85■□□□□ 0.61
CAPN8-209ENST00000482401 TOMM70O94826 608 aa18.84■□□□□ 0.61
CAPN8-209ENST00000482401 IL13P35225 146 aa18.84■□□□□ 0.61
CAPN8-209ENST00000482401 APLP1P51693 650 aa18.84■□□□□ 0.61
CAPN8-209ENST00000482401 USP42Q9H9J4 1324 aaKnown RBP18.83■□□□□ 0.61
CAPN8-209ENST00000482401 KIAA1551Q9HCM1 1747 aa18.83■□□□□ 0.6
CAPN8-209ENST00000482401 ZPR1O75312 459 aa18.82■□□□□ 0.6
CAPN8-209ENST00000482401 FKBP8Q14318 412 aa18.82■□□□□ 0.6
CAPN8-209ENST00000482401 DALRD3Q5D0E6 543 aaKnown RBP18.82■□□□□ 0.6
CAPN8-209ENST00000482401 MYH14Q7Z406 1995 aaKnown RBP18.81■□□□□ 0.6
CAPN8-209ENST00000482401 KCNA3P22001 575 aa18.81■□□□□ 0.6
CAPN8-209ENST00000482401 SRP68Q9UHB9 627 aaKnown RBP18.81■□□□□ 0.6
CAPN8-209ENST00000482401 CCER1Q8TC90 406 aaPredicted RBP18.8■□□□□ 0.6
CAPN8-209ENST00000482401 SLC52A2Q9HAB3 445 aa18.8■□□□□ 0.6
CAPN8-209ENST00000482401 C9orf131Q5VYM1 1079 aa18.79■□□□□ 0.6
CAPN8-209ENST00000482401 INTS5Q6P9B9 1019 aaKnown RBP18.79■□□□□ 0.6
CAPN8-209ENST00000482401 C16orf71Q8IYS4 520 aaPredicted RBP18.79■□□□□ 0.6
CAPN8-209ENST00000482401 TM4SF1P30408 202 aa18.78■□□□□ 0.6
CAPN8-209ENST00000482401 KDM2BQ8NHM5 1336 aa18.77■□□□□ 0.6
CAPN8-209ENST00000482401 DDR1Q08345 913 aa18.77■□□□□ 0.6
CAPN8-209ENST00000482401 AMER1Q5JTC6 1135 aaPredicted RBP18.77■□□□□ 0.6
CAPN8-209ENST00000482401 DNAJC10Q8IXB1 793 aa18.77■□□□□ 0.6
CAPN8-209ENST00000482401 SCN11AQ9UI33 1791 aa18.77■□□□□ 0.6
CAPN8-209ENST00000482401 BRCA1P38398 1863 aaKnown RBP18.77■□□□□ 0.6
CAPN8-209ENST00000482401 ARFGEF1Q9Y6D6 1849 aa18.77■□□□□ 0.59
CAPN8-209ENST00000482401 POLRMTO00411 1230 aaKnown RBP18.76■□□□□ 0.59
CAPN8-209ENST00000482401 RNMTO43148 476 aaKnown RBP18.76■□□□□ 0.59
CAPN8-209ENST00000482401 USPL1Q5W0Q7 1092 aa18.76■□□□□ 0.59
CAPN8-209ENST00000482401 VSIG10Q8N0Z9 540 aa18.76■□□□□ 0.59
CAPN8-209ENST00000482401 RBM46Q8TBY0 533 aaKnown RBP18.76■□□□□ 0.59
CAPN8-209ENST00000482401 LGR6Q9HBX8 967 aa18.76■□□□□ 0.59
CAPN8-209ENST00000482401 SOS1Q07889 1333 aaPredicted RBP18.75■□□□□ 0.59
CAPN8-209ENST00000482401 TJP1Q07157 1748 aa18.75■□□□□ 0.59
CAPN8-209ENST00000482401 CYP19A1P11511 503 aaPredicted RBP18.75■□□□□ 0.59
CAPN8-209ENST00000482401 NMRK2Q9NPI5 230 aa18.75■□□□□ 0.59
CAPN8-209ENST00000482401 RNF181Q9P0P0 153 aa18.74■□□□□ 0.59
CAPN8-209ENST00000482401 NARFQ9UHQ1 456 aa18.74■□□□□ 0.59
CAPN8-209ENST00000482401 DIAPH1O60610 1272 aaKnown RBP18.73■□□□□ 0.59
CAPN8-209ENST00000482401 HMOX1P09601 288 aa18.73■□□□□ 0.59
CAPN8-209ENST00000482401 CHRNA5P30532 468 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms