RNA–Protein interactions for RNA: ENST00000482318.5

RUNX1-216, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-216ENST00000482318 SLC4A2P04920 1241 aa28.02■■■□□ 2.08
RUNX1-216ENST00000482318 PHKG2P15735 406 aa28.02■■■□□ 2.08
RUNX1-216ENST00000482318 CARD10Q9BWT7 1032 aa28.02■■■□□ 2.08
RUNX1-216ENST00000482318 TOM1O60784 492 aa28.01■■■□□ 2.07
RUNX1-216ENST00000482318 RWDD1Q9H446 243 aaPredicted RBP28.01■■■□□ 2.07
RUNX1-216ENST00000482318 PCDHB15Q9Y5E8 787 aa28.01■■■□□ 2.07
RUNX1-216ENST00000482318 HSP90AB1P08238 724 aaKnown RBP28.01■■■□□ 2.07
RUNX1-216ENST00000482318 ZBTB40Q9NUA8 1239 aa28.01■■■□□ 2.07
RUNX1-216ENST00000482318 COL16A1Q07092 1604 aaPredicted RBP28■■■□□ 2.07
RUNX1-216ENST00000482318 EVA1CP58658 441 aa28■■■□□ 2.07
RUNX1-216ENST00000482318 EIF4A1P60842 406 aaKnown RBP28■■■□□ 2.07
RUNX1-216ENST00000482318 IGHDP01880 384 aa27.99■■■□□ 2.07
RUNX1-216ENST00000482318 RGS12O14924 1447 aa27.97■■■□□ 2.07
RUNX1-216ENST00000482318 DCAF5Q96JK2 942 aa27.97■■■□□ 2.07
RUNX1-216ENST00000482318 KDM6AO15550 1401 aaPredicted RBP27.97■■■□□ 2.07
RUNX1-216ENST00000482318 MRC1P22897 1456 aa27.96■■■□□ 2.07
RUNX1-216ENST00000482318 INTS3Q68E01 1043 aaKnown RBP27.95■■■□□ 2.07
RUNX1-216ENST00000482318 STRN4Q9NRL3 753 aa27.95■■■□□ 2.07
RUNX1-216ENST00000482318 ZBTB7BO15156 539 aaPredicted RBP27.95■■■□□ 2.06
RUNX1-216ENST00000482318 HDGFL1Q5TGJ6 251 aa27.95■■■□□ 2.06
RUNX1-216ENST00000482318 PCDH11XQ9BZA7 1347 aa27.94■■■□□ 2.06
RUNX1-216ENST00000482318 PCDH11YQ9BZA8 1340 aa27.94■■■□□ 2.06
RUNX1-216ENST00000482318 IL2RBP14784 551 aa27.94■■■□□ 2.06
RUNX1-216ENST00000482318 SLC52A2Q9HAB3 445 aa27.94■■■□□ 2.06
RUNX1-216ENST00000482318 CYP27B1O15528 508 aa27.93■■■□□ 2.06
RUNX1-216ENST00000482318 HDAC1Q13547 482 aaPredicted RBP27.93■■■□□ 2.06
RUNX1-216ENST00000482318 LARP1Q6PKG0 1096 aaKnown RBP27.92■■■□□ 2.06
RUNX1-216ENST00000482318 ZCRB1Q8TBF4 217 aaKnown RBP27.92■■■□□ 2.06
RUNX1-216ENST00000482318 BTG4Q9NY30 223 aa27.91■■■□□ 2.06
RUNX1-216ENST00000482318 FLIIQ13045 1269 aa27.89■■■□□ 2.06
RUNX1-216ENST00000482318 HEG1Q9ULI3 1381 aa27.89■■■□□ 2.06
RUNX1-216ENST00000482318 KCNQ3O43525 872 aa27.89■■■□□ 2.05
RUNX1-216ENST00000482318 N4BP2Q86UW6 1770 aaPredicted RBP27.88■■■□□ 2.05
RUNX1-216ENST00000482318 G2E3Q7L622 706 aa27.88■■■□□ 2.05
RUNX1-216ENST00000482318 RBM19Q9Y4C8 960 aaKnown RBP27.88■■■□□ 2.05
RUNX1-216ENST00000482318 SHANK3Q9BYB0 1731 aa27.88■■■□□ 2.05
RUNX1-216ENST00000482318 CCT4P50991 539 aaKnown RBP27.87■■■□□ 2.05
RUNX1-216ENST00000482318 NECTIN2Q92692 538 aa27.87■■■□□ 2.05
RUNX1-216ENST00000482318 PLCH1Q4KWH8 1693 aa27.86■■■□□ 2.05
RUNX1-216ENST00000482318 PIP4K2BP78356 416 aa27.86■■■□□ 2.05
RUNX1-216ENST00000482318 FKBP5Q13451 457 aaPredicted RBP27.86■■■□□ 2.05
RUNX1-216ENST00000482318 PXDNLA1KZ92 1463 aa27.86■■■□□ 2.05
RUNX1-216ENST00000482318 ZNF790Q6PG37 636 aa27.85■■■□□ 2.05
RUNX1-216ENST00000482318 NFATC2IPQ8NCF5 419 aa27.85■■■□□ 2.05
RUNX1-216ENST00000482318 GIGYF1O75420 1035 aaPredicted RBP27.84■■■□□ 2.05
RUNX1-216ENST00000482318 EIF2S2P20042 333 aaKnown RBP27.84■■■□□ 2.05
RUNX1-216ENST00000482318 CABP4P57796 275 aa27.83■■■□□ 2.05
RUNX1-216ENST00000482318 UBAP1LF5GYI3 381 aa27.82■■■□□ 2.04
RUNX1-216ENST00000482318 NKX1-1Q15270 411 aaPredicted RBP27.82■■■□□ 2.04
RUNX1-216ENST00000482318 DBF4Q9UBU7 674 aaPredicted RBP27.82■■■□□ 2.04
RUNX1-216ENST00000482318 TTC5Q8N0Z6 440 aa27.81■■■□□ 2.04
RUNX1-216ENST00000482318 ERVV-2B6SEH9 535 aa27.8■■■□□ 2.04
RUNX1-216ENST00000482318 SLC4A10Q6U841 1118 aa27.8■■■□□ 2.04
RUNX1-216ENST00000482318 SKAP1Q86WV1 359 aa27.8■■■□□ 2.04
RUNX1-216ENST00000482318 CHPF2Q9P2E5 772 aa27.8■■■□□ 2.04
RUNX1-216ENST00000482318 WNK3Q9BYP7 1800 aa27.8■■■□□ 2.04
RUNX1-216ENST00000482318 RGS3P49796 1198 aa27.79■■■□□ 2.04
RUNX1-216ENST00000482318 SMC5Q8IY18 1101 aa27.79■■■□□ 2.04
RUNX1-216ENST00000482318 NRAPQ86VF7 1730 aa27.78■■■□□ 2.04
RUNX1-216ENST00000482318 C5P01031 1676 aa27.78■■■□□ 2.04
RUNX1-216ENST00000482318 F6X3S4 739 aa27.78■■■□□ 2.04
RUNX1-216ENST00000482318 USP35Q9P2H5 1018 aa27.78■■■□□ 2.04
RUNX1-216ENST00000482318 PDZRN3Q9UPQ7 1066 aa27.78■■■□□ 2.04
RUNX1-216ENST00000482318 NWD2Q9ULI1 1742 aa27.77■■■□□ 2.04
RUNX1-216ENST00000482318 DISP2A7MBM2 1401 aa27.77■■■□□ 2.04
RUNX1-216ENST00000482318 SLC39A6Q13433 755 aa27.77■■■□□ 2.04
RUNX1-216ENST00000482318 C1orf115Q9H7X2 142 aa27.76■■■□□ 2.03
RUNX1-216ENST00000482318 PHAXQ9H814 394 aaKnown RBP27.75■■■□□ 2.03
RUNX1-216ENST00000482318 DDX54Q8TDD1 881 aaKnown RBP27.75■■■□□ 2.03
RUNX1-216ENST00000482318 GCC1Q96CN9 775 aa27.75■■■□□ 2.03
RUNX1-216ENST00000482318 FMNL2Q96PY5 1086 aa27.75■■■□□ 2.03
RUNX1-216ENST00000482318 ADAMTS2O95450 1211 aa27.74■■■□□ 2.03
RUNX1-216ENST00000482318 PDE4AP27815 886 aa27.74■■■□□ 2.03
RUNX1-216ENST00000482318 AEBP2Q6ZN18 517 aaPredicted RBP27.74■■■□□ 2.03
RUNX1-216ENST00000482318 HYPKQ9NX55 129 aa27.74■■■□□ 2.03
RUNX1-216ENST00000482318 LAMB4A4D0S4 1761 aa27.74■■■□□ 2.03
RUNX1-216ENST00000482318 PAPPAQ13219 1627 aa27.73■■■□□ 2.03
RUNX1-216ENST00000482318 RPAP2Q8IXW5 612 aaPredicted RBP27.73■■■□□ 2.03
RUNX1-216ENST00000482318 UBR2Q8IWV8 1755 aa27.73■■■□□ 2.03
RUNX1-216ENST00000482318 SNRPA1P09661 255 aaKnown RBP27.72■■■□□ 2.03
RUNX1-216ENST00000482318 ZNF496Q96IT1 587 aaPredicted RBP27.72■■■□□ 2.03
RUNX1-216ENST00000482318 MEIS3Q99687 375 aa27.72■■■□□ 2.03
RUNX1-216ENST00000482318 BACH2Q9BYV9 841 aa27.72■■■□□ 2.03
RUNX1-216ENST00000482318 GNAI3P08754 354 aa27.71■■■□□ 2.03
RUNX1-216ENST00000482318 CDCA7Q9BWT1 371 aaPredicted RBP27.71■■■□□ 2.03
RUNX1-216ENST00000482318 DDX21Q9NR30 783 aaKnown RBP eCLIP27.71■■■□□ 2.03
RUNX1-216ENST00000482318 ATP10DQ9P241 1426 aa27.71■■■□□ 2.03
RUNX1-216ENST00000482318 TOGARAM1Q9Y4F4 1720 aa27.7■■■□□ 2.02
RUNX1-216ENST00000482318 ANKRD44Q8N8A2 993 aa27.7■■■□□ 2.02
RUNX1-216ENST00000482318 THRAP3Q9Y2W1 955 aaKnown RBP27.7■■■□□ 2.02
RUNX1-216ENST00000482318 PRAMEF22A3QJZ6 481 aa27.69■■■□□ 2.02
RUNX1-216ENST00000482318 JCADQ9P266 1359 aa27.68■■■□□ 2.02
RUNX1-216ENST00000482318 NUTM2BA6NNL0 878 aaPredicted RBP27.68■■■□□ 2.02
RUNX1-216ENST00000482318 NUTM2EB1AL46 878 aaPredicted RBP27.68■■■□□ 2.02
RUNX1-216ENST00000482318 NUTM2AQ8IVF1 878 aaPredicted RBP27.68■■■□□ 2.02
RUNX1-216ENST00000482318 SIRT2Q8IXJ6 389 aa27.68■■■□□ 2.02
RUNX1-216ENST00000482318 DNAAF4Q8WXU2 420 aa27.68■■■□□ 2.02
RUNX1-216ENST00000482318 LRP6O75581 1613 aa27.67■■■□□ 2.02
RUNX1-216ENST00000482318 FAM161AQ3B820 660 aa27.67■■■□□ 2.02
RUNX1-216ENST00000482318 GLI3P10071 1580 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms