RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 RBM42Q9BTD8 480 aaKnown RBP26.77■■□□□ 1.88
MSH5-215ENST00000482280 AKAP4Q5JQC9 854 aa26.76■■□□□ 1.87
MSH5-215ENST00000482280 PHF14O94880 888 aa26.75■■□□□ 1.87
MSH5-215ENST00000482280 KDM6AO15550 1401 aaPredicted RBP26.73■■□□□ 1.87
MSH5-215ENST00000482280 C4BP0C0L5 1744 aa26.73■■□□□ 1.87
MSH5-215ENST00000482280 LINC00116Q8NCU8 138 aa26.72■■□□□ 1.87
MSH5-215ENST00000482280 NUDCQ9Y266 331 aa26.72■■□□□ 1.87
MSH5-215ENST00000482280 TUBGCP6Q96RT7 1819 aa26.72■■□□□ 1.87
MSH5-215ENST00000482280 GNPATO15228 680 aa26.71■■□□□ 1.87
MSH5-215ENST00000482280 SSFA2P28290 1259 aa26.71■■□□□ 1.87
MSH5-215ENST00000482280 MSL1Q68DK7 614 aa26.71■■□□□ 1.87
MSH5-215ENST00000482280 NFATC2IPQ8NCF5 419 aa26.71■■□□□ 1.87
MSH5-215ENST00000482280 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.7■■□□□ 1.86
MSH5-215ENST00000482280 MAP3K5Q99683 1374 aa26.7■■□□□ 1.86
MSH5-215ENST00000482280 TAF1LQ8IZX4 1826 aa26.69■■□□□ 1.86
MSH5-215ENST00000482280 ITPK1Q13572 414 aa26.69■■□□□ 1.86
MSH5-215ENST00000482280 PTCD1O75127 700 aaKnown RBP26.67■■□□□ 1.86
MSH5-215ENST00000482280 RTCBQ9Y3I0 505 aaKnown RBP26.67■■□□□ 1.86
MSH5-215ENST00000482280 MTHFSDQ2M296 383 aaKnown RBP26.66■■□□□ 1.86
MSH5-215ENST00000482280 YY1P25490 414 aa26.65■■□□□ 1.86
MSH5-215ENST00000482280 GAS2L2Q8NHY3 880 aa26.65■■□□□ 1.86
MSH5-215ENST00000482280 SLC52A2Q9HAB3 445 aa26.65■■□□□ 1.86
MSH5-215ENST00000482280 PPP2R1AP30153 589 aa26.64■■□□□ 1.86
MSH5-215ENST00000482280 COL3A1P02461 1466 aaPredicted RBP26.63■■□□□ 1.85
MSH5-215ENST00000482280 RNMTO43148 476 aaKnown RBP26.63■■□□□ 1.85
MSH5-215ENST00000482280 GPR162Q16538 588 aa26.63■■□□□ 1.85
MSH5-215ENST00000482280 TRAPPC3LQ5T215 181 aa26.63■■□□□ 1.85
MSH5-215ENST00000482280 PELP1Q8IZL8 1130 aaKnown RBP26.62■■□□□ 1.85
MSH5-215ENST00000482280 RC3H1Q5TC82 1133 aaKnown RBP26.61■■□□□ 1.85
MSH5-215ENST00000482280 LGR6Q9HBX8 967 aa26.61■■□□□ 1.85
MSH5-215ENST00000482280 U2AF1L5P0DN76 240 aaPredicted RBP26.6■■□□□ 1.85
MSH5-215ENST00000482280 ADRA2BP18089 450 aa26.6■■□□□ 1.85
MSH5-215ENST00000482280 U2AF1Q01081 240 aaKnown RBP eCLIP26.6■■□□□ 1.854e-10■■■□□ 19.2
MSH5-215ENST00000482280 CNTNAP4Q9C0A0 1308 aa26.6■■□□□ 1.85
MSH5-215ENST00000482280 SMIM5Q71RC9 77 aa26.59■■□□□ 1.85
MSH5-215ENST00000482280 GNAT3A8MTJ3 354 aa26.58■■□□□ 1.85
MSH5-215ENST00000482280 RFC4P35249 363 aa26.58■■□□□ 1.85
MSH5-215ENST00000482280 TEFQ10587 303 aa26.58■■□□□ 1.85
MSH5-215ENST00000482280 AMIGO3Q86WK7 504 aa26.58■■□□□ 1.85
MSH5-215ENST00000482280 SLC4A9Q96Q91 983 aa26.58■■□□□ 1.85
MSH5-215ENST00000482280 COL24A1Q17RW2 1714 aa26.58■■□□□ 1.85
MSH5-215ENST00000482280 SCN11AQ9UI33 1791 aa26.58■■□□□ 1.85
MSH5-215ENST00000482280 UBR3Q6ZT12 1888 aa26.57■■□□□ 1.84
MSH5-215ENST00000482280 ZNF831Q5JPB2 1677 aa26.57■■□□□ 1.84
MSH5-215ENST00000482280 NEFMP07197 916 aa26.57■■□□□ 1.84
MSH5-215ENST00000482280 PRKAR2BP31323 418 aa26.57■■□□□ 1.84
MSH5-215ENST00000482280 TTC5Q8N0Z6 440 aa26.57■■□□□ 1.84
MSH5-215ENST00000482280 RPS6KA4O75676 772 aa26.56■■□□□ 1.84
MSH5-215ENST00000482280 CD2APQ9Y5K6 639 aa26.56■■□□□ 1.84
MSH5-215ENST00000482280 CRKLP46109 303 aaKnown RBP26.54■■□□□ 1.84
MSH5-215ENST00000482280 NLGN2Q8NFZ4 835 aa26.54■■□□□ 1.84
MSH5-215ENST00000482280 SLC39A6Q13433 755 aa26.53■■□□□ 1.84
MSH5-215ENST00000482280 NLGN1Q8N2Q7 840 aa26.53■■□□□ 1.84
MSH5-215ENST00000482280 RSPH6AQ9H0K4 717 aa26.53■■□□□ 1.84
MSH5-215ENST00000482280 MRC1P22897 1456 aa26.53■■□□□ 1.84
MSH5-215ENST00000482280 RTF1Q92541 710 aaKnown RBP26.52■■□□□ 1.84
MSH5-215ENST00000482280 ARHGEF1Q92888 912 aaKnown RBP26.52■■□□□ 1.84
MSH5-215ENST00000482280 FCHSD2O94868 740 aa26.51■■□□□ 1.83
MSH5-215ENST00000482280 MMP10P09238 476 aa26.49■■□□□ 1.83
MSH5-215ENST00000482280 DNAJC10Q8IXB1 793 aa26.49■■□□□ 1.83
MSH5-215ENST00000482280 COL5A3P25940 1745 aaPredicted RBP26.48■■□□□ 1.83
MSH5-215ENST00000482280 CCDC87Q9NVE4 849 aa26.48■■□□□ 1.83
MSH5-215ENST00000482280 GRIN3BO60391 1043 aa26.47■■□□□ 1.83
MSH5-215ENST00000482280 VSIG10Q8N0Z9 540 aa26.47■■□□□ 1.83
MSH5-215ENST00000482280 PHACTR3Q96KR7 559 aa26.47■■□□□ 1.83
MSH5-215ENST00000482280 IL17REQ8NFR9 667 aa26.46■■□□□ 1.83
MSH5-215ENST00000482280 PARP3Q9Y6F1 533 aa26.46■■□□□ 1.83
MSH5-215ENST00000482280 STARD3NLO95772 234 aa26.45■■□□□ 1.82
MSH5-215ENST00000482280 PNNQ9H307 717 aaKnown RBP26.45■■□□□ 1.82
MSH5-215ENST00000482280 ZPR1O75312 459 aa26.44■■□□□ 1.82
MSH5-215ENST00000482280 DDX10Q13206 875 aaKnown RBP26.44■■□□□ 1.82
MSH5-215ENST00000482280 RALBP1Q15311 655 aa26.44■■□□□ 1.82
MSH5-215ENST00000482280 ADAMTS7Q9UKP4 1686 aa26.44■■□□□ 1.82
MSH5-215ENST00000482280 GYS1P13807 737 aa26.43■■□□□ 1.82
MSH5-215ENST00000482280 ZNF790Q6PG37 636 aa26.43■■□□□ 1.82
MSH5-215ENST00000482280 TEX13AQ9BXU3 409 aaPredicted RBP26.43■■□□□ 1.82
MSH5-215ENST00000482280 BTBD11A6QL63 1104 aa26.42■■□□□ 1.82
MSH5-215ENST00000482280 CYP19A1P11511 503 aaPredicted RBP26.42■■□□□ 1.82
MSH5-215ENST00000482280 INTS5Q6P9B9 1019 aaKnown RBP26.42■■□□□ 1.82
MSH5-215ENST00000482280 NPM2Q86SE8 214 aaKnown RBP26.42■■□□□ 1.82
MSH5-215ENST00000482280 TJP1Q07157 1748 aa26.42■■□□□ 1.82
MSH5-215ENST00000482280 CICQ96RK0 1608 aaPredicted RBP26.41■■□□□ 1.82
MSH5-215ENST00000482280 FMNL2Q96PY5 1086 aa26.41■■□□□ 1.82
MSH5-215ENST00000482280 VIRMAQ69YN4 1812 aaKnown RBP26.41■■□□□ 1.82
MSH5-215ENST00000482280 USP42Q9H9J4 1324 aaKnown RBP26.4■■□□□ 1.82
MSH5-215ENST00000482280 KCPQ6ZWJ8 1503 aa26.4■■□□□ 1.82
MSH5-215ENST00000482280 MAPK8IP3Q9UPT6 1336 aa26.39■■□□□ 1.81
MSH5-215ENST00000482280 CEMIPQ8WUJ3 1361 aa26.38■■□□□ 1.81
MSH5-215ENST00000482280 HTATSF1O43719 755 aaKnown RBP26.38■■□□□ 1.81
MSH5-215ENST00000482280 ZNF496Q96IT1 587 aaPredicted RBP26.38■■□□□ 1.81
MSH5-215ENST00000482280 SRP68Q9UHB9 627 aaKnown RBP26.38■■□□□ 1.81
MSH5-215ENST00000482280 SOS1Q07889 1333 aaPredicted RBP26.38■■□□□ 1.81
MSH5-215ENST00000482280 CANXP27824 592 aaKnown RBP26.37■■□□□ 1.81
MSH5-215ENST00000482280 HEG1Q9ULI3 1381 aa26.36■■□□□ 1.81
MSH5-215ENST00000482280 YBX3P16989 372 aaKnown RBP eCLIP26.36■■□□□ 1.81
MSH5-215ENST00000482280 MCM10Q7L590 875 aa26.36■■□□□ 1.81
MSH5-215ENST00000482280 ZBTB1Q9Y2K1 713 aa26.36■■□□□ 1.81
MSH5-215ENST00000482280 COL15A1P39059 1388 aa26.35■■□□□ 1.81
MSH5-215ENST00000482280 MYH14Q7Z406 1995 aaKnown RBP26.35■■□□□ 1.81
MSH5-215ENST00000482280 TGFB2P61812 414 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms