RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 COL5A3P25940 1745 aaPredicted RBP18.27■□□□□ 0.52
CTDSP1-208ENST00000482272 C1orf141Q5JVX7 400 aa18.27■□□□□ 0.52
CTDSP1-208ENST00000482272 SULT6B1Q6IMI4 303 aa18.27■□□□□ 0.52
CTDSP1-208ENST00000482272 ZNF530Q6P9A1 599 aaPredicted RBP18.27■□□□□ 0.52
CTDSP1-208ENST00000482272 VIRMAQ69YN4 1812 aaKnown RBP18.27■□□□□ 0.52
CTDSP1-208ENST00000482272 COL3A1P02461 1466 aaPredicted RBP18.26■□□□□ 0.51
CTDSP1-208ENST00000482272 MTHFSP49914 203 aa18.26■□□□□ 0.51
CTDSP1-208ENST00000482272 ITPK1Q13572 414 aa18.26■□□□□ 0.51
CTDSP1-208ENST00000482272 CC2D1BQ5T0F9 858 aaKnown RBP18.26■□□□□ 0.51
CTDSP1-208ENST00000482272 MSL1Q68DK7 614 aa18.26■□□□□ 0.51
CTDSP1-208ENST00000482272 LINC00116Q8NCU8 138 aa18.26■□□□□ 0.51
CTDSP1-208ENST00000482272 SCN11AQ9UI33 1791 aa18.26■□□□□ 0.51
CTDSP1-208ENST00000482272 ZNF831Q5JPB2 1677 aa18.25■□□□□ 0.51
CTDSP1-208ENST00000482272 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.25■□□□□ 0.51
CTDSP1-208ENST00000482272 PHF14O94880 888 aa18.25■□□□□ 0.51
CTDSP1-208ENST00000482272 SSFA2P28290 1259 aa18.25■□□□□ 0.51
CTDSP1-208ENST00000482272 CABP4P57796 275 aa18.25■□□□□ 0.51
CTDSP1-208ENST00000482272 SLC4A9Q96Q91 983 aa18.25■□□□□ 0.51
CTDSP1-208ENST00000482272 PELP1Q8IZL8 1130 aaKnown RBP18.24■□□□□ 0.51
CTDSP1-208ENST00000482272 RBM42Q9BTD8 480 aaKnown RBP18.24■□□□□ 0.51
CTDSP1-208ENST00000482272 NLGN2Q8NFZ4 835 aa18.23■□□□□ 0.51
CTDSP1-208ENST00000482272 CD2APQ9Y5K6 639 aa18.22■□□□□ 0.51
CTDSP1-208ENST00000482272 TJP1Q07157 1748 aa18.22■□□□□ 0.51
CTDSP1-208ENST00000482272 ADAMTS7Q9UKP4 1686 aa18.22■□□□□ 0.51
CTDSP1-208ENST00000482272 GNPATO15228 680 aa18.21■□□□□ 0.51
CTDSP1-208ENST00000482272 CNGB1Q14028 1251 aaPredicted RBP18.21■□□□□ 0.51
CTDSP1-208ENST00000482272 GOLGB1Q14789 3259 aaKnown RBP18.2■□□□□ 0.5
CTDSP1-208ENST00000482272 TRAPPC3LQ5T215 181 aa18.2■□□□□ 0.5
CTDSP1-208ENST00000482272 NFATC2IPQ8NCF5 419 aa18.2■□□□□ 0.5
CTDSP1-208ENST00000482272 CHD4Q14839 1912 aa18.19■□□□□ 0.5
CTDSP1-208ENST00000482272 NPC1L1Q9UHC9 1359 aa18.19■□□□□ 0.5
CTDSP1-208ENST00000482272 MYH14Q7Z406 1995 aaKnown RBP18.19■□□□□ 0.5
CTDSP1-208ENST00000482272 GRIN3BO60391 1043 aa18.19■□□□□ 0.5
CTDSP1-208ENST00000482272 DIAPH1O60610 1272 aaKnown RBP18.19■□□□□ 0.5
CTDSP1-208ENST00000482272 HMOX1P09601 288 aa18.19■□□□□ 0.5
CTDSP1-208ENST00000482272 C4AP0C0L4 1744 aa18.19■□□□□ 0.5
CTDSP1-208ENST00000482272 AKAP4Q5JQC9 854 aa18.19■□□□□ 0.5
CTDSP1-208ENST00000482272 RTCBQ9Y3I0 505 aaKnown RBP18.19■□□□□ 0.5
CTDSP1-208ENST00000482272 CICQ96RK0 1608 aaPredicted RBP18.19■□□□□ 0.5
CTDSP1-208ENST00000482272 RC3H1Q5TC82 1133 aaKnown RBP18.18■□□□□ 0.5
CTDSP1-208ENST00000482272 ZNF784Q8NCA9 323 aaPredicted RBP18.18■□□□□ 0.5
CTDSP1-208ENST00000482272 MRC1P22897 1456 aa18.17■□□□□ 0.5
CTDSP1-208ENST00000482272 PTCD1O75127 700 aaKnown RBP18.15■□□□□ 0.5
CTDSP1-208ENST00000482272 ADRA2BP18089 450 aa18.15■□□□□ 0.5
CTDSP1-208ENST00000482272 LGR6Q9HBX8 967 aa18.15■□□□□ 0.5
CTDSP1-208ENST00000482272 RPS6KA4O75676 772 aa18.14■□□□□ 0.49
CTDSP1-208ENST00000482272 NLGN1Q8N2Q7 840 aa18.14■□□□□ 0.49
CTDSP1-208ENST00000482272 CNTNAP4Q9C0A0 1308 aa18.14■□□□□ 0.49
CTDSP1-208ENST00000482272 KIAA1551Q9HCM1 1747 aa18.14■□□□□ 0.49
CTDSP1-208ENST00000482272 YBX3P16989 372 aaKnown RBP eCLIP18.13■□□□□ 0.491e-6■□□□□ 10.2
CTDSP1-208ENST00000482272 RFC4P35249 363 aa18.13■□□□□ 0.49
CTDSP1-208ENST00000482272 MTHFSDQ2M296 383 aaKnown RBP18.13■□□□□ 0.49
CTDSP1-208ENST00000482272 ARHGEF1Q92888 912 aaKnown RBP18.13■□□□□ 0.49
CTDSP1-208ENST00000482272 KCPQ6ZWJ8 1503 aa18.13■□□□□ 0.49
CTDSP1-208ENST00000482272 SLC52A2Q9HAB3 445 aa18.12■□□□□ 0.49
CTDSP1-208ENST00000482272 SIPA1L3O60292 1781 aaPredicted RBP18.12■□□□□ 0.49
CTDSP1-208ENST00000482272 UBR2Q8IWV8 1755 aa18.12■□□□□ 0.49
CTDSP1-208ENST00000482272 RNMTO43148 476 aaKnown RBP18.11■□□□□ 0.49
CTDSP1-208ENST00000482272 U2SURPO15042 1029 aaKnown RBP18.1■□□□□ 0.49
CTDSP1-208ENST00000482272 MMP10P09238 476 aa18.1■□□□□ 0.49
CTDSP1-208ENST00000482272 KIF13BQ9NQT8 1826 aa18.09■□□□□ 0.49
CTDSP1-208ENST00000482272 CRKLP46109 303 aaKnown RBP18.09■□□□□ 0.49
CTDSP1-208ENST00000482272 CFAP53Q96M91 514 aa18.08■□□□□ 0.48
CTDSP1-208ENST00000482272 GYS1P13807 737 aa18.07■□□□□ 0.48
CTDSP1-208ENST00000482272 SLC39A6Q13433 755 aa18.07■□□□□ 0.48
CTDSP1-208ENST00000482272 PARP3Q9Y6F1 533 aa18.07■□□□□ 0.48
CTDSP1-208ENST00000482272 N4BP2Q86UW6 1770 aaPredicted RBP18.07■□□□□ 0.48
CTDSP1-208ENST00000482272 TGFB2P61812 414 aa18.06■□□□□ 0.48
CTDSP1-208ENST00000482272 CCDC87Q9NVE4 849 aa18.06■□□□□ 0.48
CTDSP1-208ENST00000482272 DNAJC10Q8IXB1 793 aa18.05■□□□□ 0.48
CTDSP1-208ENST00000482272 GAS2L2Q8NHY3 880 aa18.05■□□□□ 0.48
CTDSP1-208ENST00000482272 NUDCQ9Y266 331 aa18.05■□□□□ 0.48
CTDSP1-208ENST00000482272 PPP2R1AP30153 589 aa18.04■□□□□ 0.48
CTDSP1-208ENST00000482272 INTS5Q6P9B9 1019 aaKnown RBP18.04■□□□□ 0.48
CTDSP1-208ENST00000482272 PHACTR3Q96KR7 559 aa18.04■□□□□ 0.48
CTDSP1-208ENST00000482272 GNAT3A8MTJ3 354 aa18.03■□□□□ 0.48
CTDSP1-208ENST00000482272 TTC5Q8N0Z6 440 aa18.03■□□□□ 0.48
CTDSP1-208ENST00000482272 VSIG10Q8N0Z9 540 aa18.03■□□□□ 0.48
CTDSP1-208ENST00000482272 RSPH6AQ9H0K4 717 aa18.03■□□□□ 0.48
CTDSP1-208ENST00000482272 SRP68Q9UHB9 627 aaKnown RBP18.03■□□□□ 0.48
CTDSP1-208ENST00000482272 WWC3Q9ULE0 1092 aa18.03■□□□□ 0.48
CTDSP1-208ENST00000482272 ZPR1O75312 459 aa18.02■□□□□ 0.48
CTDSP1-208ENST00000482272 TEFQ10587 303 aa18.02■□□□□ 0.48
CTDSP1-208ENST00000482272 IL17REQ8NFR9 667 aa18.02■□□□□ 0.48
CTDSP1-208ENST00000482272 PXDNLA1KZ92 1463 aa18.01■□□□□ 0.47
CTDSP1-208ENST00000482272 USP42Q9H9J4 1324 aaKnown RBP18.01■□□□□ 0.47
CTDSP1-208ENST00000482272 BRCA1P38398 1863 aaKnown RBP18.01■□□□□ 0.47
CTDSP1-208ENST00000482272 C10orf71Q711Q0 1435 aa18.01■□□□□ 0.47
CTDSP1-208ENST00000482272 CYP19A1P11511 503 aaPredicted RBP18.01■□□□□ 0.47
CTDSP1-208ENST00000482272 GIGYF1O75420 1035 aaPredicted RBP18■□□□□ 0.47
CTDSP1-208ENST00000482272 C1QTNF8P60827 252 aa18■□□□□ 0.47
CTDSP1-208ENST00000482272 A0A0G2JLW4 131 aa17.99■□□□□ 0.47
CTDSP1-208ENST00000482272 PRKAR2BP31323 418 aa17.99■□□□□ 0.47
CTDSP1-208ENST00000482272 FKBP8Q14318 412 aa17.99■□□□□ 0.47
CTDSP1-208ENST00000482272 STARD3NLO95772 234 aa17.98■□□□□ 0.47
CTDSP1-208ENST00000482272 USPL1Q5W0Q7 1092 aa17.98■□□□□ 0.47
CTDSP1-208ENST00000482272 TEX13AQ9BXU3 409 aaPredicted RBP17.98■□□□□ 0.47
CTDSP1-208ENST00000482272 CEMIPQ8WUJ3 1361 aa17.98■□□□□ 0.47
CTDSP1-208ENST00000482272 SOS1Q07889 1333 aaPredicted RBP17.98■□□□□ 0.47
CTDSP1-208ENST00000482272 U2AF1L5P0DN76 240 aaPredicted RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms