RNA–Protein interactions for RNA: ENST00000481978.5

NIFK-206, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 2

Gene NIFK, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-206ENST00000481978 DEPDC4Q8N2C3 294 aa9.4□□□□□ -0.9
NIFK-206ENST00000481978 GMCL1Q96IK5 515 aa9.4□□□□□ -0.9
NIFK-206ENST00000481978 SLC4A9Q96Q91 983 aa9.4□□□□□ -0.9
NIFK-206ENST00000481978 GNASQ5JWF2 1037 aa9.39□□□□□ -0.91
NIFK-206ENST00000481978 SV2AQ7L0J3 742 aa9.39□□□□□ -0.91
NIFK-206ENST00000481978 PPARGC1BQ86YN6 1023 aaKnown RBP9.39□□□□□ -0.91
NIFK-206ENST00000481978 GPR161Q8N6U8 529 aaKnown RBP9.39□□□□□ -0.91
NIFK-206ENST00000481978 CALR3Q96L12 384 aaKnown RBP9.39□□□□□ -0.91
NIFK-206ENST00000481978 SMTNP53814 917 aa9.38□□□□□ -0.91
NIFK-206ENST00000481978 TMEM214Q6NUQ4 689 aaKnown RBP9.38□□□□□ -0.91
NIFK-206ENST00000481978 VWA5B2Q8N398 1253 aa9.38□□□□□ -0.91
NIFK-206ENST00000481978 RHBDD1Q8TEB9 315 aa9.38□□□□□ -0.91
NIFK-206ENST00000481978 TIMMDC1Q9NPL8 285 aa9.38□□□□□ -0.91
NIFK-206ENST00000481978 CUEDC1Q9NWM3 386 aaPredicted RBP9.38□□□□□ -0.91
NIFK-206ENST00000481978 TRIM22Q8IYM9 498 aa9.37□□□□□ -0.91
NIFK-206ENST00000481978 CDC14CA4D256 554 aa9.36□□□□□ -0.91
NIFK-206ENST00000481978 H7C1W4 665 aa9.36□□□□□ -0.91
NIFK-206ENST00000481978 ATP1A2P50993 1020 aa9.36□□□□□ -0.91
NIFK-206ENST00000481978 MTFR1Q15390 333 aa9.36□□□□□ -0.91
NIFK-206ENST00000481978 C4orf17Q53FE4 359 aa9.36□□□□□ -0.91
NIFK-206ENST00000481978 TFIP11Q9UBB9 837 aaKnown RBP9.36□□□□□ -0.91
NIFK-206ENST00000481978 A0A1B0GTH6 734 aa9.35□□□□□ -0.91
NIFK-206ENST00000481978 PALM3A6NDB9 673 aaPredicted RBP9.35□□□□□ -0.91
NIFK-206ENST00000481978 BACH1O14867 736 aa9.35□□□□□ -0.91
NIFK-206ENST00000481978 F11P03951 625 aa9.35□□□□□ -0.91
NIFK-206ENST00000481978 PPP1R12CQ9BZL4 782 aa9.35□□□□□ -0.91
NIFK-206ENST00000481978 SERTAD1Q9UHV2 236 aa9.35□□□□□ -0.91
NIFK-206ENST00000481978 MAFBQ9Y5Q3 323 aaPredicted RBP9.35□□□□□ -0.91
NIFK-206ENST00000481978 GTF3C3Q9Y5Q9 886 aa9.35□□□□□ -0.91
NIFK-206ENST00000481978 A6NJY4 79 aa9.34□□□□□ -0.91
NIFK-206ENST00000481978 CDK2AP1O14519 115 aa9.34□□□□□ -0.91
NIFK-206ENST00000481978 KRT76Q01546 638 aa9.34□□□□□ -0.91
NIFK-206ENST00000481978 PSME1Q06323 249 aa9.34□□□□□ -0.91
NIFK-206ENST00000481978 ZNF837Q96EG3 531 aaPredicted RBP9.34□□□□□ -0.91
NIFK-206ENST00000481978 GAS2L1Q99501 681 aaPredicted RBP9.34□□□□□ -0.91
NIFK-206ENST00000481978 ZNF358Q9NW07 568 aa9.34□□□□□ -0.91
NIFK-206ENST00000481978 MKRN1Q9UHC7 482 aaKnown RBP9.34□□□□□ -0.91
NIFK-206ENST00000481978 ZBTB7BO15156 539 aaPredicted RBP9.33□□□□□ -0.92
NIFK-206ENST00000481978 LORP23490 312 aaPredicted RBP9.33□□□□□ -0.92
NIFK-206ENST00000481978 PHKA2P46019 1235 aa9.33□□□□□ -0.92
NIFK-206ENST00000481978 CLDN10P78369 228 aa9.33□□□□□ -0.92
NIFK-206ENST00000481978 RIPOR1Q6ZS17 1223 aa9.33□□□□□ -0.92
NIFK-206ENST00000481978 LARGE2Q8N3Y3 721 aa9.33□□□□□ -0.92
NIFK-206ENST00000481978 IQSEC3Q9UPP2 1182 aaPredicted RBP9.33□□□□□ -0.92
NIFK-206ENST00000481978 DBN1Q16643 649 aa9.32□□□□□ -0.92
NIFK-206ENST00000481978 ZNF295-AS1Q8N0V1 137 aa9.32□□□□□ -0.92
NIFK-206ENST00000481978 ZSCAN1Q8NBB4 408 aa9.32□□□□□ -0.92
NIFK-206ENST00000481978 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.32□□□□□ -0.92
NIFK-206ENST00000481978 COL25A1Q9BXS0 654 aaPredicted RBP9.32□□□□□ -0.92
NIFK-206ENST00000481978 NIFKQ9BYG3 293 aaKnown RBP9.32□□□□□ -0.92
NIFK-206ENST00000481978 DNAAF2Q9NVR5 837 aaKnown RBP9.32□□□□□ -0.92
NIFK-206ENST00000481978 STK17AQ9UEE5 414 aa9.32□□□□□ -0.92
NIFK-206ENST00000481978 ZNF777Q9ULD5 760 aaPredicted RBP9.32□□□□□ -0.92
NIFK-206ENST00000481978 KIAA1024Q9UPX6 916 aa9.32□□□□□ -0.92
NIFK-206ENST00000481978 SIX5Q8N196 739 aa9.31□□□□□ -0.92
NIFK-206ENST00000481978 OGFOD1Q8N543 542 aa9.31□□□□□ -0.92
NIFK-206ENST00000481978 TPCN2Q8NHX9 752 aa9.31□□□□□ -0.92
NIFK-206ENST00000481978 ZMYND15Q9H091 742 aa9.31□□□□□ -0.92
NIFK-206ENST00000481978 M0R2N6 131 aa9.3□□□□□ -0.92
NIFK-206ENST00000481978 EPHA4P54764 986 aa9.3□□□□□ -0.92
NIFK-206ENST00000481978 LBRQ14739 615 aaKnown RBP9.3□□□□□ -0.92
NIFK-206ENST00000481978 RNFT1Q5M7Z0 435 aa9.3□□□□□ -0.92
NIFK-206ENST00000481978 CCDC102BQ68D86 513 aa9.3□□□□□ -0.92
NIFK-206ENST00000481978 FOXR1Q6PIV2 292 aa9.3□□□□□ -0.92
NIFK-206ENST00000481978 CNTNAP3BQ96NU0 1288 aa9.3□□□□□ -0.92
NIFK-206ENST00000481978 CNTNAP3Q9BZ76 1288 aa9.3□□□□□ -0.92
NIFK-206ENST00000481978 SCHIP1Q9P0W5 487 aaPredicted RBP9.3□□□□□ -0.92
NIFK-206ENST00000481978 MSX1P28360 303 aa9.29□□□□□ -0.92
NIFK-206ENST00000481978 PLA2G4AP47712 749 aa9.29□□□□□ -0.92
NIFK-206ENST00000481978 FOXK2Q01167 660 aa9.29□□□□□ -0.92
NIFK-206ENST00000481978 C1orf216Q8TAB5 229 aa9.29□□□□□ -0.92
NIFK-206ENST00000481978 NUCKS1Q9H1E3 243 aaKnown RBP9.29□□□□□ -0.92
NIFK-206ENST00000481978 KANK4Q5T7N3 995 aaPredicted RBP9.28□□□□□ -0.92
NIFK-206ENST00000481978 GPAMQ9HCL2 828 aa9.28□□□□□ -0.92
NIFK-206ENST00000481978 USP3Q9Y6I4 520 aa9.28□□□□□ -0.92
NIFK-206ENST00000481978 DKK1O94907 266 aa9.27□□□□□ -0.93
NIFK-206ENST00000481978 RASA1P20936 1047 aa9.27□□□□□ -0.93
NIFK-206ENST00000481978 GAS6Q14393 721 aa9.27□□□□□ -0.93
NIFK-206ENST00000481978 GTPBP3Q969Y2 492 aaKnown RBP9.27□□□□□ -0.93
NIFK-206ENST00000481978 CRISPLD1Q9H336 500 aa9.27□□□□□ -0.93
NIFK-206ENST00000481978 THBS1P07996 1170 aa9.26□□□□□ -0.93
NIFK-206ENST00000481978 SLURP2P0DP57 97 aa9.26□□□□□ -0.93
NIFK-206ENST00000481978 CSB-PGBD3P0DP91 1061 aa9.26□□□□□ -0.93
NIFK-206ENST00000481978 LMOD1P29536 600 aaPredicted RBP9.26□□□□□ -0.93
NIFK-206ENST00000481978 CFAP70Q5T0N1 1121 aa9.26□□□□□ -0.93
NIFK-206ENST00000481978 PGBD3Q8N328 593 aa9.26□□□□□ -0.93
NIFK-206ENST00000481978 TRERF1Q96PN7 1200 aa9.26□□□□□ -0.93
NIFK-206ENST00000481978 ZDHHC3Q9NYG2 299 aa9.26□□□□□ -0.93
NIFK-206ENST00000481978 CABP1Q9NZU7 370 aa9.26□□□□□ -0.93
NIFK-206ENST00000481978 FAM181BA6NEQ2 426 aa9.25□□□□□ -0.93
NIFK-206ENST00000481978 ATP4AP20648 1035 aa9.25□□□□□ -0.93
NIFK-206ENST00000481978 SRSF11Q05519 484 aaKnown RBP9.25□□□□□ -0.93
NIFK-206ENST00000481978 TEAD4Q15561 434 aa9.25□□□□□ -0.93
NIFK-206ENST00000481978 NBPF1Q3BBV0 1214 aa9.25□□□□□ -0.93
NIFK-206ENST00000481978 LARP1Q6PKG0 1096 aaKnown RBP9.25□□□□□ -0.93
NIFK-206ENST00000481978 TNS4Q8IZW8 715 aa9.25□□□□□ -0.93
NIFK-206ENST00000481978 ZNF594Q96JF6 807 aaPredicted RBP9.25□□□□□ -0.93
NIFK-206ENST00000481978 RUBCNLQ9H714 662 aa9.25□□□□□ -0.93
NIFK-206ENST00000481978 RBM19Q9Y4C8 960 aaKnown RBP9.25□□□□□ -0.93
NIFK-206ENST00000481978 PTK7Q13308 1070 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms