RNA–Protein interactions for RNA: ENST00000481875.1

GARNL3-217, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-217ENST00000481875 TMOD3Q9NYL9 352 aa15.88■□□□□ 0.13
GARNL3-217ENST00000481875 ERVV-2B6SEH9 535 aa15.87■□□□□ 0.13
GARNL3-217ENST00000481875 C1QTNF8P60827 252 aa15.87■□□□□ 0.13
GARNL3-217ENST00000481875 AMIGO3Q86WK7 504 aa15.87■□□□□ 0.13
GARNL3-217ENST00000481875 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.86■□□□□ 0.13
GARNL3-217ENST00000481875 KLHL34Q8N239 644 aa15.86■□□□□ 0.13
GARNL3-217ENST00000481875 ASAP1Q9ULH1 1129 aa15.86■□□□□ 0.13
GARNL3-217ENST00000481875 CEP350Q5VT06 3117 aa15.85■□□□□ 0.13
GARNL3-217ENST00000481875 HSP90AB1P08238 724 aaKnown RBP15.85■□□□□ 0.13
GARNL3-217ENST00000481875 MSL1Q68DK7 614 aa15.85■□□□□ 0.13
GARNL3-217ENST00000481875 LINC00116Q8NCU8 138 aa15.85■□□□□ 0.13
GARNL3-217ENST00000481875 DCAF5Q96JK2 942 aa15.85■□□□□ 0.13
GARNL3-217ENST00000481875 PANK3Q9H999 370 aa15.85■□□□□ 0.13
GARNL3-217ENST00000481875 ATG3Q9NT62 314 aa15.85■□□□□ 0.13
GARNL3-217ENST00000481875 ITPK1Q13572 414 aa15.84■□□□□ 0.13
GARNL3-217ENST00000481875 AMOTQ4VCS5 1084 aa15.84■□□□□ 0.13
GARNL3-217ENST00000481875 KIF13BQ9NQT8 1826 aa15.84■□□□□ 0.13
GARNL3-217ENST00000481875 KDRP35968 1356 aa15.84■□□□□ 0.13
GARNL3-217ENST00000481875 HSPA5P11021 654 aaKnown RBP15.83■□□□□ 0.12
GARNL3-217ENST00000481875 ATP6V1AP38606 617 aa15.83■□□□□ 0.12
GARNL3-217ENST00000481875 RC3H1Q5TC82 1133 aaKnown RBP15.83■□□□□ 0.12
GARNL3-217ENST00000481875 PLEKHO1Q53GL0 409 aaPredicted RBP15.82■□□□□ 0.12
GARNL3-217ENST00000481875 COL5A3P25940 1745 aaPredicted RBP15.82■□□□□ 0.12
GARNL3-217ENST00000481875 PELP1Q8IZL8 1130 aaKnown RBP15.81■□□□□ 0.12
GARNL3-217ENST00000481875 MYH14Q7Z406 1995 aaKnown RBP15.8■□□□□ 0.12
GARNL3-217ENST00000481875 CICQ96RK0 1608 aaPredicted RBP15.79■□□□□ 0.12
GARNL3-217ENST00000481875 ADCY9O60503 1353 aa15.79■□□□□ 0.12
GARNL3-217ENST00000481875 GNPATO15228 680 aa15.79■□□□□ 0.12
GARNL3-217ENST00000481875 GIGYF1O75420 1035 aaPredicted RBP15.79■□□□□ 0.12
GARNL3-217ENST00000481875 TNNT2P45379 298 aaPredicted RBP15.79■□□□□ 0.12
GARNL3-217ENST00000481875 SLC4A9Q96Q91 983 aa15.79■□□□□ 0.12
GARNL3-217ENST00000481875 KDM6AO15550 1401 aaPredicted RBP15.78■□□□□ 0.12
GARNL3-217ENST00000481875 CNTNAP4Q9C0A0 1308 aa15.78■□□□□ 0.12
GARNL3-217ENST00000481875 PHF14O94880 888 aa15.78■□□□□ 0.12
GARNL3-217ENST00000481875 NLGN1Q8N2Q7 840 aa15.78■□□□□ 0.12
GARNL3-217ENST00000481875 SCN11AQ9UI33 1791 aa15.77■□□□□ 0.12
GARNL3-217ENST00000481875 TRAPPC3LQ5T215 181 aa15.77■□□□□ 0.12
GARNL3-217ENST00000481875 MORC1Q86VD1 984 aa15.77■□□□□ 0.12
GARNL3-217ENST00000481875 RTCBQ9Y3I0 505 aaKnown RBP15.77■□□□□ 0.12
GARNL3-217ENST00000481875 RPS6KA4O75676 772 aa15.76■□□□□ 0.11
GARNL3-217ENST00000481875 IL13P35225 146 aa15.76■□□□□ 0.11
GARNL3-217ENST00000481875 TGFB2P61812 414 aa15.76■□□□□ 0.11
GARNL3-217ENST00000481875 SMIM5Q71RC9 77 aa15.76■□□□□ 0.11
GARNL3-217ENST00000481875 POLR3GLQ9BT43 218 aa15.76■□□□□ 0.11
GARNL3-217ENST00000481875 KNSTRNQ9Y448 316 aa15.76■□□□□ 0.11
GARNL3-217ENST00000481875 KIAA1551Q9HCM1 1747 aa15.76■□□□□ 0.11
GARNL3-217ENST00000481875 MTHFSP49914 203 aa15.75■□□□□ 0.11
GARNL3-217ENST00000481875 AMER1Q5JTC6 1135 aaPredicted RBP15.75■□□□□ 0.11
GARNL3-217ENST00000481875 ZNF530Q6P9A1 599 aaPredicted RBP15.75■□□□□ 0.11
GARNL3-217ENST00000481875 ATP10DQ9P241 1426 aa15.75■□□□□ 0.11
GARNL3-217ENST00000481875 BRCA1P38398 1863 aaKnown RBP15.74■□□□□ 0.11
GARNL3-217ENST00000481875 SENP3-EIF4A1A0A087X0R7 540 aa15.74■□□□□ 0.11
GARNL3-217ENST00000481875 MMP10P09238 476 aa15.74■□□□□ 0.11
GARNL3-217ENST00000481875 CABP4P57796 275 aa15.74■□□□□ 0.11
GARNL3-217ENST00000481875 ARHGEF1Q92888 912 aaKnown RBP15.74■□□□□ 0.11
GARNL3-217ENST00000481875 C1orf141Q5JVX7 400 aa15.73■□□□□ 0.11
GARNL3-217ENST00000481875 AEBP1Q8IUX7 1158 aa15.73■□□□□ 0.11
GARNL3-217ENST00000481875 C4AP0C0L4 1744 aa15.73■□□□□ 0.11
GARNL3-217ENST00000481875 C10orf71Q711Q0 1435 aa15.72■□□□□ 0.11
GARNL3-217ENST00000481875 PER1O15534 1290 aaPredicted RBP15.72■□□□□ 0.11
GARNL3-217ENST00000481875 GYS1P13807 737 aa15.72■□□□□ 0.11
GARNL3-217ENST00000481875 SULT6B1Q6IMI4 303 aa15.72■□□□□ 0.11
GARNL3-217ENST00000481875 NFATC2IPQ8NCF5 419 aa15.72■□□□□ 0.11
GARNL3-217ENST00000481875 RBM42Q9BTD8 480 aaKnown RBP15.72■□□□□ 0.11
GARNL3-217ENST00000481875 PXDNLA1KZ92 1463 aa15.71■□□□□ 0.11
GARNL3-217ENST00000481875 VIRMAQ69YN4 1812 aaKnown RBP15.71■□□□□ 0.11
GARNL3-217ENST00000481875 ADAMTS7Q9UKP4 1686 aa15.7■□□□□ 0.1
GARNL3-217ENST00000481875 N4BP2Q86UW6 1770 aaPredicted RBP15.7■□□□□ 0.1
GARNL3-217ENST00000481875 RFC4P35249 363 aa15.7■□□□□ 0.1
GARNL3-217ENST00000481875 AKAP4Q5JQC9 854 aa15.7■□□□□ 0.1
GARNL3-217ENST00000481875 GPBP1L1Q9HC44 474 aaPredicted RBP15.7■□□□□ 0.1
GARNL3-217ENST00000481875 TJP1Q07157 1748 aa15.7■□□□□ 0.1
GARNL3-217ENST00000481875 ARFGEF1Q9Y6D6 1849 aa15.7■□□□□ 0.1
GARNL3-217ENST00000481875 MRC1P22897 1456 aa15.69■□□□□ 0.1
GARNL3-217ENST00000481875 KIF7Q2M1P5 1343 aa15.68■□□□□ 0.1
GARNL3-217ENST00000481875 NPC1L1Q9UHC9 1359 aa15.68■□□□□ 0.1
GARNL3-217ENST00000481875 CRKLP46109 303 aaKnown RBP15.68■□□□□ 0.1
GARNL3-217ENST00000481875 CCDC87Q9NVE4 849 aa15.68■□□□□ 0.1
GARNL3-217ENST00000481875 PTCD1O75127 700 aaKnown RBP15.67■□□□□ 0.1
GARNL3-217ENST00000481875 SLC52A2Q9HAB3 445 aa15.67■□□□□ 0.1
GARNL3-217ENST00000481875 USP42Q9H9J4 1324 aaKnown RBP15.67■□□□□ 0.1
GARNL3-217ENST00000481875 KCNA3P22001 575 aa15.66■□□□□ 0.1
GARNL3-217ENST00000481875 INTS5Q6P9B9 1019 aaKnown RBP15.66■□□□□ 0.1
GARNL3-217ENST00000481875 PARP3Q9Y6F1 533 aa15.66■□□□□ 0.1
GARNL3-217ENST00000481875 A0A0G2JLW4 131 aa15.65■□□□□ 0.1
GARNL3-217ENST00000481875 TM4SF1P30408 202 aa15.65■□□□□ 0.1
GARNL3-217ENST00000481875 VSIG10Q8N0Z9 540 aa15.65■□□□□ 0.1
GARNL3-217ENST00000481875 UBR2Q8IWV8 1755 aa15.64■□□□□ 0.09
GARNL3-217ENST00000481875 KIF3CO14782 793 aa15.63■□□□□ 0.09
GARNL3-217ENST00000481875 RNMTO43148 476 aaKnown RBP15.63■□□□□ 0.09
GARNL3-217ENST00000481875 DPEP1P16444 411 aa15.63■□□□□ 0.09
GARNL3-217ENST00000481875 LGR6Q9HBX8 967 aa15.63■□□□□ 0.09
GARNL3-217ENST00000481875 DIAPH1O60610 1272 aaKnown RBP15.62■□□□□ 0.09
GARNL3-217ENST00000481875 CYP19A1P11511 503 aaPredicted RBP15.62■□□□□ 0.09
GARNL3-217ENST00000481875 HSPA6P17066 643 aa15.62■□□□□ 0.09
GARNL3-217ENST00000481875 FKBP8Q14318 412 aa15.62■□□□□ 0.09
GARNL3-217ENST00000481875 SAMD1Q6SPF0 538 aaPredicted RBP15.62■□□□□ 0.09
GARNL3-217ENST00000481875 PIM2Q9P1W9 311 aa15.62■□□□□ 0.09
GARNL3-217ENST00000481875 BCS1LQ9Y276 419 aa15.62■□□□□ 0.09
GARNL3-217ENST00000481875 NRXN2Q9P2S2 1712 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms