RNA–Protein interactions for RNA: ENST00000481484.1

VPS13D-208, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 360 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-208ENST00000481484 NBPF8Q3BBV2 869 aa5.9□□□□□ -1.46
VPS13D-208ENST00000481484 ABTB2Q8N961 1025 aa5.9□□□□□ -1.46
VPS13D-208ENST00000481484 ANO8Q9HCE9 1232 aaPredicted RBP5.9□□□□□ -1.46
VPS13D-208ENST00000481484 TNS2Q63HR2 1409 aa5.9□□□□□ -1.47
VPS13D-208ENST00000481484 QSER1Q2KHR3 1735 aa5.89□□□□□ -1.47
VPS13D-208ENST00000481484 NBPF1Q3BBV0 1214 aa5.89□□□□□ -1.47
VPS13D-208ENST00000481484 FAM196AQ6ZSG2 479 aa5.89□□□□□ -1.47
VPS13D-208ENST00000481484 TCP11L2Q8N4U5 519 aa5.89□□□□□ -1.47
VPS13D-208ENST00000481484 KCNH5Q8NCM2 988 aa5.89□□□□□ -1.47
VPS13D-208ENST00000481484 L3MBTL2Q969R5 705 aa5.89□□□□□ -1.47
VPS13D-208ENST00000481484 CFAP44Q96MT7 982 aa5.89□□□□□ -1.47
VPS13D-208ENST00000481484 CDCA7Q9BWT1 371 aaPredicted RBP5.89□□□□□ -1.47
VPS13D-208ENST00000481484 CCDC7Q96M83 1385 aa5.89□□□□□ -1.47
VPS13D-208ENST00000481484 MYOM1P52179 1685 aa5.88□□□□□ -1.47
VPS13D-208ENST00000481484 ANKRD26Q9UPS8 1709 aa5.88□□□□□ -1.47
VPS13D-208ENST00000481484 MMRN1Q13201 1228 aa5.88□□□□□ -1.47
VPS13D-208ENST00000481484 CAMK2BQ13554 666 aa5.88□□□□□ -1.47
VPS13D-208ENST00000481484 POTEEQ6S8J3 1075 aa5.88□□□□□ -1.47
VPS13D-208ENST00000481484 PUS7Q96PZ0 661 aaKnown RBP5.88□□□□□ -1.47
VPS13D-208ENST00000481484 EMILIN3Q9NT22 766 aa5.88□□□□□ -1.47
VPS13D-208ENST00000481484 WDR17Q8IZU2 1322 aa5.88□□□□□ -1.47
VPS13D-208ENST00000481484 USP31Q70CQ4 1352 aa5.88□□□□□ -1.47
VPS13D-208ENST00000481484 KTN1Q86UP2 1357 aaKnown RBP5.88□□□□□ -1.47
VPS13D-208ENST00000481484 CASZ1Q86V15 1759 aa5.88□□□□□ -1.47
VPS13D-208ENST00000481484 GCP02774 474 aa5.87□□□□□ -1.47
VPS13D-208ENST00000481484 PBX2P40425 430 aa5.87□□□□□ -1.47
VPS13D-208ENST00000481484 RTL1A6NKG5 1358 aa5.87□□□□□ -1.47
VPS13D-208ENST00000481484 CD163L1Q9NR16 1453 aa5.87□□□□□ -1.47
VPS13D-208ENST00000481484 KAT6BQ8WYB5 2073 aa5.87□□□□□ -1.47
VPS13D-208ENST00000481484 BTAF1O14981 1849 aa5.86□□□□□ -1.47
VPS13D-208ENST00000481484 TTC21BQ7Z4L5 1316 aa5.86□□□□□ -1.47
VPS13D-208ENST00000481484 CLSPNQ9HAW4 1339 aa5.86□□□□□ -1.47
VPS13D-208ENST00000481484 EVA1CP58658 441 aa5.86□□□□□ -1.47
VPS13D-208ENST00000481484 ZC3H6P61129 1189 aaKnown RBP5.86□□□□□ -1.47
VPS13D-208ENST00000481484 PDE3BQ13370 1112 aa5.86□□□□□ -1.47
VPS13D-208ENST00000481484 CHRNA2Q15822 529 aa5.86□□□□□ -1.47
VPS13D-208ENST00000481484 STRN4Q9NRL3 753 aa5.86□□□□□ -1.47
VPS13D-208ENST00000481484 DOT1LQ8TEK3 1739 aa5.85□□□□□ -1.47
VPS13D-208ENST00000481484 SHANK3Q9BYB0 1731 aa5.85□□□□□ -1.47
VPS13D-208ENST00000481484 PAPPAQ13219 1627 aa5.85□□□□□ -1.47
VPS13D-208ENST00000481484 A0A1W2PP64 1363 aa5.85□□□□□ -1.47
VPS13D-208ENST00000481484 EVI5O60447 810 aa5.85□□□□□ -1.47
VPS13D-208ENST00000481484 MAP3K9P80192 1104 aa5.85□□□□□ -1.47
VPS13D-208ENST00000481484 HDGFL2Q7Z4V5 671 aaPredicted RBP5.85□□□□□ -1.47
VPS13D-208ENST00000481484 DEFB132Q7Z7B7 95 aa5.85□□□□□ -1.47
VPS13D-208ENST00000481484 CARD11Q9BXL7 1154 aa5.85□□□□□ -1.47
VPS13D-208ENST00000481484 TERF2IPQ9NYB0 399 aa5.85□□□□□ -1.47
VPS13D-208ENST00000481484 CABP1Q9NZU7 370 aa5.85□□□□□ -1.47
VPS13D-208ENST00000481484 SMG6Q86US8 1419 aaKnown RBP5.84□□□□□ -1.47
VPS13D-208ENST00000481484 ANKRD36BQ8N2N9 1353 aa5.84□□□□□ -1.47
VPS13D-208ENST00000481484 ARHGAP33O14559 1287 aa5.84□□□□□ -1.47
VPS13D-208ENST00000481484 LSM11P83369 360 aaKnown RBP eCLIP5.84□□□□□ -1.47
VPS13D-208ENST00000481484 PPP4R3BQ5MIZ7 849 aa5.84□□□□□ -1.47
VPS13D-208ENST00000481484 NUTM2GQ5VZR2 741 aa5.84□□□□□ -1.47
VPS13D-208ENST00000481484 LARP1Q6PKG0 1096 aaKnown RBP5.84□□□□□ -1.47
VPS13D-208ENST00000481484 ARHGEF25Q86VW2 580 aa5.84□□□□□ -1.47
VPS13D-208ENST00000481484 PKD1L3Q7Z443 1732 aa5.84□□□□□ -1.47
VPS13D-208ENST00000481484 KIF24Q5T7B8 1368 aa5.83□□□□□ -1.48
VPS13D-208ENST00000481484 USP47Q96K76 1375 aa5.83□□□□□ -1.48
VPS13D-208ENST00000481484 PLEKHG2Q9H7P9 1386 aa5.83□□□□□ -1.48
VPS13D-208ENST00000481484 LY75O60449 1722 aa5.83□□□□□ -1.48
VPS13D-208ENST00000481484 FOSBP53539 338 aa5.83□□□□□ -1.48
VPS13D-208ENST00000481484 DDB1Q16531 1140 aa5.83□□□□□ -1.48
VPS13D-208ENST00000481484 CDCA8Q53HL2 280 aa5.83□□□□□ -1.48
VPS13D-208ENST00000481484 NBPF14Q5TI25 921 aa5.83□□□□□ -1.48
VPS13D-208ENST00000481484 TOM1L2Q6ZVM7 507 aa5.83□□□□□ -1.48
VPS13D-208ENST00000481484 CARD10Q9BWT7 1032 aa5.83□□□□□ -1.48
VPS13D-208ENST00000481484 USP35Q9P2H5 1018 aa5.83□□□□□ -1.48
VPS13D-208ENST00000481484 AXIN2Q9Y2T1 843 aa5.83□□□□□ -1.48
VPS13D-208ENST00000481484 COL24A1Q17RW2 1714 aa5.82□□□□□ -1.48
VPS13D-208ENST00000481484 CHD4Q14839 1912 aa5.82□□□□□ -1.48
VPS13D-208ENST00000481484 TRIM37O94972 964 aa5.82□□□□□ -1.48
VPS13D-208ENST00000481484 CSB-PGBD3P0DP91 1061 aa5.82□□□□□ -1.48
VPS13D-208ENST00000481484 NEUROD1Q13562 356 aa5.82□□□□□ -1.48
VPS13D-208ENST00000481484 ANKRD13DQ6ZTN6 518 aa5.82□□□□□ -1.48
VPS13D-208ENST00000481484 CAMKK2Q96RR4 588 aa5.82□□□□□ -1.48
VPS13D-208ENST00000481484 SIN3AQ96ST3 1273 aa5.82□□□□□ -1.48
VPS13D-208ENST00000481484 TIMELESSQ9UNS1 1208 aa5.82□□□□□ -1.48
VPS13D-208ENST00000481484 TUBGCP6Q96RT7 1819 aa5.82□□□□□ -1.48
VPS13D-208ENST00000481484 RGPD2P0DJD1 1756 aa5.82□□□□□ -1.48
VPS13D-208ENST00000481484 APBA3O96018 575 aa5.81□□□□□ -1.48
VPS13D-208ENST00000481484 PTGER2P43116 358 aa5.81□□□□□ -1.48
VPS13D-208ENST00000481484 EN1Q05925 392 aaPredicted RBP5.81□□□□□ -1.48
VPS13D-208ENST00000481484 TRIM26Q12899 539 aaPredicted RBP5.81□□□□□ -1.48
VPS13D-208ENST00000481484 ZNF454Q8N9F8 522 aa5.81□□□□□ -1.48
VPS13D-208ENST00000481484 BCL2L12Q9HB09 334 aa5.81□□□□□ -1.48
VPS13D-208ENST00000481484 C5P01031 1676 aa5.8□□□□□ -1.48
VPS13D-208ENST00000481484 ZBTB7CA1YPR0 619 aa5.8□□□□□ -1.48
VPS13D-208ENST00000481484 PLSCR1O15162 318 aa5.8□□□□□ -1.48
VPS13D-208ENST00000481484 HMGB2P26583 209 aaKnown RBP5.8□□□□□ -1.48
VPS13D-208ENST00000481484 PSEN2P49810 448 aa5.8□□□□□ -1.48
VPS13D-208ENST00000481484 TMF1P82094 1093 aa5.8□□□□□ -1.48
VPS13D-208ENST00000481484 TMC1Q8TDI8 760 aa5.8□□□□□ -1.48
VPS13D-208ENST00000481484 TESK2Q96S53 571 aa5.8□□□□□ -1.48
VPS13D-208ENST00000481484 ARIH1Q9Y4X5 557 aaPredicted RBP5.8□□□□□ -1.48
VPS13D-208ENST00000481484 TAF1LQ8IZX4 1826 aa5.8□□□□□ -1.48
VPS13D-208ENST00000481484 FLT4P35916 1363 aa5.8□□□□□ -1.48
VPS13D-208ENST00000481484 CGNL1Q0VF96 1302 aa5.79□□□□□ -1.48
VPS13D-208ENST00000481484 MAP2P11137 1827 aaKnown RBP5.79□□□□□ -1.48
VPS13D-208ENST00000481484 TK2O00142 265 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms