RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 PPP2R5DQ14738 602 aa13.49□□□□□ -0.25
TRIM27-205ENST00000481474 CCDC89Q8N998 374 aa13.49□□□□□ -0.25
TRIM27-205ENST00000481474 CCDC63Q8NA47 563 aa13.49□□□□□ -0.25
TRIM27-205ENST00000481474 TCHPQ9BT92 498 aa13.49□□□□□ -0.25
TRIM27-205ENST00000481474 GPR162Q16538 588 aa13.49□□□□□ -0.25
TRIM27-205ENST00000481474 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.49□□□□□ -0.25
TRIM27-205ENST00000481474 TMEM110-MUSTN1A8MSY1 372 aa13.49□□□□□ -0.25
TRIM27-205ENST00000481474 LRRCC1Q9C099 1032 aa13.49□□□□□ -0.25
TRIM27-205ENST00000481474 NACA2Q9H009 215 aa13.49□□□□□ -0.25
TRIM27-205ENST00000481474 SKIV2LQ15477 1246 aaKnown RBP13.48□□□□□ -0.25
TRIM27-205ENST00000481474 LPXNO60711 386 aa13.48□□□□□ -0.25
TRIM27-205ENST00000481474 RASA3Q14644 834 aa13.48□□□□□ -0.25
TRIM27-205ENST00000481474 FAM170AA1A519 330 aa13.48□□□□□ -0.25
TRIM27-205ENST00000481474 ZNF530Q6P9A1 599 aaPredicted RBP13.48□□□□□ -0.25
TRIM27-205ENST00000481474 FAM43AQ8N2R8 423 aa13.48□□□□□ -0.25
TRIM27-205ENST00000481474 CAVIN1Q6NZI2 390 aaKnown RBP13.47□□□□□ -0.25
TRIM27-205ENST00000481474 GIGYF2Q6Y7W6 1299 aaKnown RBP13.47□□□□□ -0.25
TRIM27-205ENST00000481474 UBAP1LF5GYI3 381 aa13.47□□□□□ -0.25
TRIM27-205ENST00000481474 ALS2CR12Q96Q35 445 aa13.47□□□□□ -0.25
TRIM27-205ENST00000481474 STK24Q9Y6E0 443 aa13.47□□□□□ -0.25
TRIM27-205ENST00000481474 ABL1P00519 1130 aa13.47□□□□□ -0.25
TRIM27-205ENST00000481474 TPD52P55327 224 aaPredicted RBP13.47□□□□□ -0.25
TRIM27-205ENST00000481474 CCDC160A6NGH7 325 aa13.47□□□□□ -0.25
TRIM27-205ENST00000481474 LMOD1P29536 600 aaPredicted RBP13.47□□□□□ -0.25
TRIM27-205ENST00000481474 TDRD12Q587J7 1177 aaKnown RBP13.47□□□□□ -0.25
TRIM27-205ENST00000481474 CCDC30Q5VVM6 783 aa13.47□□□□□ -0.25
TRIM27-205ENST00000481474 AACSQ86V21 672 aa13.47□□□□□ -0.25
TRIM27-205ENST00000481474 MIS18AQ9NYP9 233 aa13.47□□□□□ -0.25
TRIM27-205ENST00000481474 FNDC3AQ9Y2H6 1198 aaKnown RBP13.47□□□□□ -0.25
TRIM27-205ENST00000481474 RAB11FIP4Q86YS3 637 aa13.47□□□□□ -0.25
TRIM27-205ENST00000481474 PRPF31Q8WWY3 499 aaKnown RBP13.47□□□□□ -0.25
TRIM27-205ENST00000481474 PPP1R9BQ96SB3 815 aa13.47□□□□□ -0.25
TRIM27-205ENST00000481474 ZNF396Q96N95 335 aaPredicted RBP13.46□□□□□ -0.25
TRIM27-205ENST00000481474 BTBD11A6QL63 1104 aa13.46□□□□□ -0.25
TRIM27-205ENST00000481474 RIMBP2O15034 1052 aa13.46□□□□□ -0.25
TRIM27-205ENST00000481474 NEK4P51957 841 aa13.46□□□□□ -0.25
TRIM27-205ENST00000481474 PKD2L1Q9P0L9 805 aa13.46□□□□□ -0.25
TRIM27-205ENST00000481474 SPG7Q9UQ90 795 aa13.46□□□□□ -0.25
TRIM27-205ENST00000481474 C4orf50Q6ZRC1 276 aa13.46□□□□□ -0.25
TRIM27-205ENST00000481474 HARSP12081 509 aaKnown RBP13.46□□□□□ -0.26
TRIM27-205ENST00000481474 PPFIA1Q13136 1202 aa13.46□□□□□ -0.26
TRIM27-205ENST00000481474 SEPT6Q14141 434 aa13.46□□□□□ -0.26
TRIM27-205ENST00000481474 GEN1Q17RS7 908 aa13.46□□□□□ -0.26
TRIM27-205ENST00000481474 PANK1Q8TE04 598 aa13.45□□□□□ -0.26
TRIM27-205ENST00000481474 TMOD3Q9NYL9 352 aa13.45□□□□□ -0.26
TRIM27-205ENST00000481474 HDGFL1Q5TGJ6 251 aa13.45□□□□□ -0.26
TRIM27-205ENST00000481474 CWC27Q6UX04 472 aaKnown RBP13.45□□□□□ -0.26
TRIM27-205ENST00000481474 SMG6Q86US8 1419 aaKnown RBP13.45□□□□□ -0.26
TRIM27-205ENST00000481474 MXRA7P84157 204 aa13.45□□□□□ -0.26
TRIM27-205ENST00000481474 USHBP1Q8N6Y0 703 aa13.45□□□□□ -0.26
TRIM27-205ENST00000481474 EXOC6Q8TAG9 804 aa13.45□□□□□ -0.26
TRIM27-205ENST00000481474 ZNF652Q9Y2D9 606 aa13.45□□□□□ -0.26
TRIM27-205ENST00000481474 CNGA1P29973 690 aa13.45□□□□□ -0.26
TRIM27-205ENST00000481474 RNF34Q969K3 372 aa13.45□□□□□ -0.26
TRIM27-205ENST00000481474 CUL4BQ13620 913 aa13.45□□□□□ -0.26
TRIM27-205ENST00000481474 JAG2Q9Y219 1238 aa13.45□□□□□ -0.26
TRIM27-205ENST00000481474 PRPF40AO75400 957 aaKnown RBP13.44□□□□□ -0.26
TRIM27-205ENST00000481474 POLD1P28340 1107 aa13.44□□□□□ -0.26
TRIM27-205ENST00000481474 CABP5Q9NP86 173 aa13.44□□□□□ -0.26
TRIM27-205ENST00000481474 ISM2Q6H9L7 571 aa13.44□□□□□ -0.26
TRIM27-205ENST00000481474 API5Q9BZZ5 524 aaKnown RBP13.44□□□□□ -0.26
TRIM27-205ENST00000481474 ERCC5P28715 1186 aaPredicted RBP13.44□□□□□ -0.26
TRIM27-205ENST00000481474 SNX16P57768 344 aa13.44□□□□□ -0.26
TRIM27-205ENST00000481474 SMC1BQ8NDV3 1235 aa13.44□□□□□ -0.26
TRIM27-205ENST00000481474 MPHOSPH6Q99547 160 aaKnown RBP13.44□□□□□ -0.26
TRIM27-205ENST00000481474 STARD3NLO95772 234 aa13.44□□□□□ -0.26
TRIM27-205ENST00000481474 OSCARQ8IYS5 282 aa13.44□□□□□ -0.26
TRIM27-205ENST00000481474 FNBP4Q8N3X1 1017 aaPredicted RBP13.44□□□□□ -0.26
TRIM27-205ENST00000481474 SFMBT1Q9UHJ3 866 aa13.44□□□□□ -0.26
TRIM27-205ENST00000481474 ANKRD18BA2A2Z9 1011 aa13.43□□□□□ -0.26
TRIM27-205ENST00000481474 IQSEC3Q9UPP2 1182 aaPredicted RBP13.43□□□□□ -0.26
TRIM27-205ENST00000481474 TSTA3Q13630 321 aaPredicted RBP13.43□□□□□ -0.26
TRIM27-205ENST00000481474 ZNF397Q8NF99 534 aaPredicted RBP13.43□□□□□ -0.26
TRIM27-205ENST00000481474 JARID2Q92833 1246 aaPredicted RBP13.43□□□□□ -0.26
TRIM27-205ENST00000481474 CAMK4Q16566 473 aa13.43□□□□□ -0.26
TRIM27-205ENST00000481474 CENPQQ7L2Z9 268 aaPredicted RBP13.43□□□□□ -0.26
TRIM27-205ENST00000481474 TSHZ2Q9NRE2 1034 aa13.43□□□□□ -0.26
TRIM27-205ENST00000481474 XRCC6P12956 609 aaKnown RBP eCLIP13.43□□□□□ -0.262e-6■■■□□ 18.8
TRIM27-205ENST00000481474 SPECC1Q5M775 1068 aa13.42□□□□□ -0.26
TRIM27-205ENST00000481474 LUZP1Q86V48 1076 aa13.42□□□□□ -0.26
TRIM27-205ENST00000481474 TSG101Q99816 390 aa13.42□□□□□ -0.26
TRIM27-205ENST00000481474 CARMIL2Q6F5E8 1435 aa13.42□□□□□ -0.26
TRIM27-205ENST00000481474 BCAR3O75815 825 aa13.42□□□□□ -0.26
TRIM27-205ENST00000481474 CCDC65Q8IXS2 484 aa13.42□□□□□ -0.26
TRIM27-205ENST00000481474 PANK2Q9BZ23 570 aa13.42□□□□□ -0.26
TRIM27-205ENST00000481474 FCHSD2O94868 740 aa13.42□□□□□ -0.26
TRIM27-205ENST00000481474 CEP126Q9P2H0 1117 aa13.42□□□□□ -0.26
TRIM27-205ENST00000481474 SLC4A2P04920 1241 aa13.42□□□□□ -0.26
TRIM27-205ENST00000481474 ZBTB33Q86T24 672 aa13.42□□□□□ -0.26
TRIM27-205ENST00000481474 IFNLR1Q8IU57 520 aaPredicted RBP13.42□□□□□ -0.26
TRIM27-205ENST00000481474 DDX19BQ9UMR2 479 aa13.42□□□□□ -0.26
TRIM27-205ENST00000481474 TTLL3Q9Y4R7 772 aa13.42□□□□□ -0.26
TRIM27-205ENST00000481474 IDEP14735 1019 aa13.42□□□□□ -0.26
TRIM27-205ENST00000481474 SKOR2Q2VWA4 1001 aaPredicted RBP13.42□□□□□ -0.26
TRIM27-205ENST00000481474 FOXD4Q12950 439 aaPredicted RBP13.41□□□□□ -0.26
TRIM27-205ENST00000481474 IL1RAPL2Q9NP60 686 aa13.41□□□□□ -0.26
TRIM27-205ENST00000481474 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.41□□□□□ -0.26
TRIM27-205ENST00000481474 FERMT1Q9BQL6 677 aa13.41□□□□□ -0.26
TRIM27-205ENST00000481474 TNMDQ9H2S6 317 aa13.41□□□□□ -0.26
TRIM27-205ENST00000481474 PRKCSHP14314 528 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms