RNA–Protein interactions for RNA: ENST00000481152.2

CHCHD3-205, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 2

Gene CHCHD3, Length 1,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-205ENST00000481152 ZSCAN1Q8NBB4 408 aa8.54□□□□□ -1.04
CHCHD3-205ENST00000481152 UCN2Q96RP3 112 aa8.54□□□□□ -1.04
CHCHD3-205ENST00000481152 TIMMDC1Q9NPL8 285 aa8.54□□□□□ -1.04
CHCHD3-205ENST00000481152 GTF2E1P29083 439 aaPredicted RBP8.53□□□□□ -1.04
CHCHD3-205ENST00000481152 GNASQ5JWF2 1037 aa8.53□□□□□ -1.04
CHCHD3-205ENST00000481152 TMEM214Q6NUQ4 689 aaKnown RBP8.53□□□□□ -1.04
CHCHD3-205ENST00000481152 RIPOR1Q6ZS17 1223 aa8.53□□□□□ -1.04
CHCHD3-205ENST00000481152 DEPDC4Q8N2C3 294 aa8.53□□□□□ -1.04
CHCHD3-205ENST00000481152 COL25A1Q9BXS0 654 aaPredicted RBP8.53□□□□□ -1.04
CHCHD3-205ENST00000481152 NOD1Q9Y239 953 aa8.53□□□□□ -1.04
CHCHD3-205ENST00000481152 PCDHGA11Q9Y5H2 935 aa8.53□□□□□ -1.04
CHCHD3-205ENST00000481152 A6NJR5 290 aa8.52□□□□□ -1.05
CHCHD3-205ENST00000481152 RNFT1Q5M7Z0 435 aa8.52□□□□□ -1.05
CHCHD3-205ENST00000481152 TRIM22Q8IYM9 498 aa8.52□□□□□ -1.05
CHCHD3-205ENST00000481152 ZNF837Q96EG3 531 aaPredicted RBP8.52□□□□□ -1.05
CHCHD3-205ENST00000481152 CNTNAP3BQ96NU0 1288 aa8.52□□□□□ -1.05
CHCHD3-205ENST00000481152 GAS2L1Q99501 681 aaPredicted RBP8.52□□□□□ -1.05
CHCHD3-205ENST00000481152 CNTNAP3Q9BZ76 1288 aa8.52□□□□□ -1.05
CHCHD3-205ENST00000481152 PODXL2Q9NZ53 605 aa8.52□□□□□ -1.05
CHCHD3-205ENST00000481152 PHKA2P46019 1235 aa8.51□□□□□ -1.05
CHCHD3-205ENST00000481152 GTF2IP78347 998 aa8.51□□□□□ -1.05
CHCHD3-205ENST00000481152 TBC1D9Q6ZT07 1266 aa8.51□□□□□ -1.05
CHCHD3-205ENST00000481152 GLMNQ92990 594 aa8.51□□□□□ -1.05
CHCHD3-205ENST00000481152 USP17L3A6NCW0 530 aa8.5□□□□□ -1.05
CHCHD3-205ENST00000481152 USP17L4A6NCW7 530 aa8.5□□□□□ -1.05
CHCHD3-205ENST00000481152 TMEM229AB2RXF0 380 aa8.5□□□□□ -1.05
CHCHD3-205ENST00000481152 DBN1Q16643 649 aa8.5□□□□□ -1.05
CHCHD3-205ENST00000481152 C4orf17Q53FE4 359 aa8.5□□□□□ -1.05
CHCHD3-205ENST00000481152 USP17L2Q6R6M4 530 aa8.5□□□□□ -1.05
CHCHD3-205ENST00000481152 USP17L1Q7RTZ2 530 aa8.5□□□□□ -1.05
CHCHD3-205ENST00000481152 PPARGC1BQ86YN6 1023 aaKnown RBP8.5□□□□□ -1.05
CHCHD3-205ENST00000481152 PLEKHM2Q8IWE5 1019 aa8.5□□□□□ -1.05
CHCHD3-205ENST00000481152 RHBDD1Q8TEB9 315 aa8.5□□□□□ -1.05
CHCHD3-205ENST00000481152 GMCL1Q96IK5 515 aa8.5□□□□□ -1.05
CHCHD3-205ENST00000481152 ATP9BO43861 1147 aa8.49□□□□□ -1.05
CHCHD3-205ENST00000481152 F11P03951 625 aa8.49□□□□□ -1.05
CHCHD3-205ENST00000481152 SERTAD1Q9UHV2 236 aa8.49□□□□□ -1.05
CHCHD3-205ENST00000481152 A0A1B0GTH6 734 aa8.48□□□□□ -1.05
CHCHD3-205ENST00000481152 H7C1W4 665 aa8.48□□□□□ -1.05
CHCHD3-205ENST00000481152 SMTNP53814 917 aa8.48□□□□□ -1.05
CHCHD3-205ENST00000481152 PSME1Q06323 249 aa8.48□□□□□ -1.05
CHCHD3-205ENST00000481152 SLC4A9Q96Q91 983 aa8.48□□□□□ -1.05
CHCHD3-205ENST00000481152 FAM181BA6NEQ2 426 aa8.48□□□□□ -1.05
CHCHD3-205ENST00000481152 GPAMQ9HCL2 828 aa8.48□□□□□ -1.05
CHCHD3-205ENST00000481152 GAS6Q14393 721 aa8.47□□□□□ -1.05
CHCHD3-205ENST00000481152 FOXR1Q6PIV2 292 aa8.47□□□□□ -1.05
CHCHD3-205ENST00000481152 TRIM50Q86XT4 487 aa8.47□□□□□ -1.05
CHCHD3-205ENST00000481152 GTPBP3Q969Y2 492 aaKnown RBP8.47□□□□□ -1.05
CHCHD3-205ENST00000481152 NUCKS1Q9H1E3 243 aaKnown RBP8.47□□□□□ -1.05
CHCHD3-205ENST00000481152 A6NJY4 79 aa8.46□□□□□ -1.06
CHCHD3-205ENST00000481152 GPR25O00155 361 aa8.46□□□□□ -1.06
CHCHD3-205ENST00000481152 PLA2G4AP47712 749 aa8.46□□□□□ -1.06
CHCHD3-205ENST00000481152 MTFR1Q15390 333 aa8.46□□□□□ -1.06
CHCHD3-205ENST00000481152 CALR3Q96L12 384 aaKnown RBP8.46□□□□□ -1.06
CHCHD3-205ENST00000481152 ZNF358Q9NW07 568 aa8.46□□□□□ -1.06
CHCHD3-205ENST00000481152 BACH1O14867 736 aa8.45□□□□□ -1.06
CHCHD3-205ENST00000481152 MSX1P28360 303 aa8.45□□□□□ -1.06
CHCHD3-205ENST00000481152 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.45□□□□□ -1.06
CHCHD3-205ENST00000481152 NIFKQ9BYG3 293 aaKnown RBP8.45□□□□□ -1.06
CHCHD3-205ENST00000481152 IQSEC3Q9UPP2 1182 aaPredicted RBP8.45□□□□□ -1.06
CHCHD3-205ENST00000481152 CDK2AP1O14519 115 aa8.44□□□□□ -1.06
CHCHD3-205ENST00000481152 THBS1P07996 1170 aa8.44□□□□□ -1.06
CHCHD3-205ENST00000481152 ATP1A2P50993 1020 aa8.44□□□□□ -1.06
CHCHD3-205ENST00000481152 CLDN10P78369 228 aa8.44□□□□□ -1.06
CHCHD3-205ENST00000481152 ZNF295-AS1Q8N0V1 137 aa8.44□□□□□ -1.06
CHCHD3-205ENST00000481152 TFIP11Q9UBB9 837 aaKnown RBP8.44□□□□□ -1.06
CHCHD3-205ENST00000481152 KIAA1024Q9UPX6 916 aa8.44□□□□□ -1.06
CHCHD3-205ENST00000481152 USP3Q9Y6I4 520 aa8.44□□□□□ -1.06
CHCHD3-205ENST00000481152 ZBTB7BO15156 539 aaPredicted RBP8.43□□□□□ -1.06
CHCHD3-205ENST00000481152 SLURP2P0DP57 97 aa8.43□□□□□ -1.06
CHCHD3-205ENST00000481152 TPCN2Q8NHX9 752 aa8.43□□□□□ -1.06
CHCHD3-205ENST00000481152 TRERF1Q96PN7 1200 aa8.43□□□□□ -1.06
CHCHD3-205ENST00000481152 RUBCNLQ9H714 662 aa8.43□□□□□ -1.06
CHCHD3-205ENST00000481152 MKRN1Q9UHC7 482 aaKnown RBP8.43□□□□□ -1.06
CHCHD3-205ENST00000481152 MAFBQ9Y5Q3 323 aaPredicted RBP8.43□□□□□ -1.06
CHCHD3-205ENST00000481152 PALM3A6NDB9 673 aaPredicted RBP8.42□□□□□ -1.06
CHCHD3-205ENST00000481152 CSB-PGBD3P0DP91 1061 aa8.42□□□□□ -1.06
CHCHD3-205ENST00000481152 PGBD3Q8N328 593 aa8.42□□□□□ -1.06
CHCHD3-205ENST00000481152 OGFOD1Q8N543 542 aa8.42□□□□□ -1.06
CHCHD3-205ENST00000481152 MBIPQ9NS73 344 aa8.42□□□□□ -1.06
CHCHD3-205ENST00000481152 DNAAF2Q9NVR5 837 aaKnown RBP8.42□□□□□ -1.06
CHCHD3-205ENST00000481152 ADAMTS2O95450 1211 aa8.41□□□□□ -1.06
CHCHD3-205ENST00000481152 SRSF11Q05519 484 aaKnown RBP8.41□□□□□ -1.06
CHCHD3-205ENST00000481152 LBRQ14739 615 aaKnown RBP8.41□□□□□ -1.06
CHCHD3-205ENST00000481152 CCDC102BQ68D86 513 aa8.41□□□□□ -1.06
CHCHD3-205ENST00000481152 PPP1R12CQ9BZL4 782 aa8.41□□□□□ -1.06
CHCHD3-205ENST00000481152 SCHIP1Q9P0W5 487 aaPredicted RBP8.41□□□□□ -1.06
CHCHD3-205ENST00000481152 ATP4AP20648 1035 aa8.4□□□□□ -1.06
CHCHD3-205ENST00000481152 EPHA4P54764 986 aa8.4□□□□□ -1.06
CHCHD3-205ENST00000481152 UBAP2LQ14157 1087 aaKnown RBP8.4□□□□□ -1.06
CHCHD3-205ENST00000481152 EFHC2Q5JST6 749 aa8.4□□□□□ -1.06
CHCHD3-205ENST00000481152 ZNF385CQ66K41 422 aaPredicted RBP8.4□□□□□ -1.06
CHCHD3-205ENST00000481152 LARGE2Q8N3Y3 721 aa8.4□□□□□ -1.06
CHCHD3-205ENST00000481152 C1orf216Q8TAB5 229 aa8.4□□□□□ -1.06
CHCHD3-205ENST00000481152 AIDAQ96BJ3 306 aa8.4□□□□□ -1.06
CHCHD3-205ENST00000481152 CRISPLD1Q9H336 500 aa8.4□□□□□ -1.06
CHCHD3-205ENST00000481152 CABP1Q9NZU7 370 aa8.4□□□□□ -1.06
CHCHD3-205ENST00000481152 FOXK2Q01167 660 aa8.39□□□□□ -1.07
CHCHD3-205ENST00000481152 NBPF1Q3BBV0 1214 aa8.39□□□□□ -1.07
CHCHD3-205ENST00000481152 TNS4Q8IZW8 715 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms