RNA–Protein interactions for RNA: ENST00000481098.1

GTF3C3-211, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-211ENST00000481098 TPCN2Q8NHX9 752 aa11.43□□□□□ -0.58
GTF3C3-211ENST00000481098 SPATA31C2B4DYI2 1134 aa11.42□□□□□ -0.58
GTF3C3-211ENST00000481098 M0R2N6 131 aa11.42□□□□□ -0.58
GTF3C3-211ENST00000481098 MTFR1Q15390 333 aa11.42□□□□□ -0.58
GTF3C3-211ENST00000481098 LARP1Q6PKG0 1096 aaKnown RBP11.42□□□□□ -0.58
GTF3C3-211ENST00000481098 ZNF358Q9NW07 568 aa11.42□□□□□ -0.58
GTF3C3-211ENST00000481098 USP17L15C9J2P7 530 aa11.41□□□□□ -0.58
GTF3C3-211ENST00000481098 USP17L10C9JJH3 530 aa11.41□□□□□ -0.58
GTF3C3-211ENST00000481098 USP17L13C9JLJ4 530 aa11.41□□□□□ -0.58
GTF3C3-211ENST00000481098 USP17L12C9JPN9 530 aa11.41□□□□□ -0.58
GTF3C3-211ENST00000481098 USP17L11C9JVI0 530 aa11.41□□□□□ -0.58
GTF3C3-211ENST00000481098 USP17L21D6R901 530 aa11.41□□□□□ -0.58
GTF3C3-211ENST00000481098 USP17L18D6R9N7 530 aa11.41□□□□□ -0.58
GTF3C3-211ENST00000481098 USP17L22D6RA61 530 aa11.41□□□□□ -0.58
GTF3C3-211ENST00000481098 USP17L17D6RBQ6 530 aa11.41□□□□□ -0.58
GTF3C3-211ENST00000481098 USP17L19D6RCP7 530 aa11.41□□□□□ -0.58
GTF3C3-211ENST00000481098 USP17L20D6RJB6 530 aa11.41□□□□□ -0.58
GTF3C3-211ENST00000481098 BACH1O14867 736 aa11.41□□□□□ -0.58
GTF3C3-211ENST00000481098 USP17L24Q0WX57 530 aa11.41□□□□□ -0.58
GTF3C3-211ENST00000481098 WDR44Q5JSH3 913 aa11.41□□□□□ -0.58
GTF3C3-211ENST00000481098 FIGNL2A6NMB9 653 aa11.4□□□□□ -0.58
GTF3C3-211ENST00000481098 SUPT5HO00267 1087 aaKnown RBP11.4□□□□□ -0.58
GTF3C3-211ENST00000481098 RFX1P22670 979 aa11.4□□□□□ -0.58
GTF3C3-211ENST00000481098 SMTNP53814 917 aa11.4□□□□□ -0.58
GTF3C3-211ENST00000481098 TLR1Q15399 786 aa11.4□□□□□ -0.58
GTF3C3-211ENST00000481098 SLC27A3Q5K4L6 730 aa11.4□□□□□ -0.58
GTF3C3-211ENST00000481098 PBXIP1Q96AQ6 731 aa11.4□□□□□ -0.58
GTF3C3-211ENST00000481098 ZNF594Q96JF6 807 aaPredicted RBP11.4□□□□□ -0.58
GTF3C3-211ENST00000481098 EPHA4P54764 986 aa11.39□□□□□ -0.59
GTF3C3-211ENST00000481098 PPARGC1BQ86YN6 1023 aaKnown RBP11.39□□□□□ -0.59
GTF3C3-211ENST00000481098 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.39□□□□□ -0.59
GTF3C3-211ENST00000481098 ZSCAN10Q96SZ4 725 aaPredicted RBP11.39□□□□□ -0.59
GTF3C3-211ENST00000481098 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.38□□□□□ -0.59
GTF3C3-211ENST00000481098 ELOAQ14241 798 aaKnown RBP11.38□□□□□ -0.59
GTF3C3-211ENST00000481098 NPAS3Q8IXF0 933 aa11.38□□□□□ -0.59
GTF3C3-211ENST00000481098 ARXQ96QS3 562 aa11.38□□□□□ -0.59
GTF3C3-211ENST00000481098 IQSEC3Q9UPP2 1182 aaPredicted RBP11.38□□□□□ -0.59
GTF3C3-211ENST00000481098 A6NJY4 79 aa11.37□□□□□ -0.59
GTF3C3-211ENST00000481098 PTSQ03393 145 aa11.37□□□□□ -0.59
GTF3C3-211ENST00000481098 PRICKLE2Q7Z3G6 844 aa11.37□□□□□ -0.59
GTF3C3-211ENST00000481098 ANKMY2Q8IV38 441 aa11.37□□□□□ -0.59
GTF3C3-211ENST00000481098 ZNF295-AS1Q8N0V1 137 aa11.37□□□□□ -0.59
GTF3C3-211ENST00000481098 SERTAD1Q9UHV2 236 aa11.37□□□□□ -0.59
GTF3C3-211ENST00000481098 SENP3-EIF4A1A0A087X0R7 540 aa11.36□□□□□ -0.59
GTF3C3-211ENST00000481098 CDK2AP1O14519 115 aa11.36□□□□□ -0.59
GTF3C3-211ENST00000481098 ATG7O95352 703 aa11.36□□□□□ -0.59
GTF3C3-211ENST00000481098 SEC13P55735 322 aa11.36□□□□□ -0.59
GTF3C3-211ENST00000481098 FOXK2Q01167 660 aa11.36□□□□□ -0.59
GTF3C3-211ENST00000481098 NBPF10Q6P3W6 841 aaKnown RBP11.36□□□□□ -0.59
GTF3C3-211ENST00000481098 NBPF15Q8N660 670 aa11.36□□□□□ -0.59
GTF3C3-211ENST00000481098 RHBDD1Q8TEB9 315 aa11.36□□□□□ -0.59
GTF3C3-211ENST00000481098 SCHIP1Q9P0W5 487 aaPredicted RBP11.36□□□□□ -0.59
GTF3C3-211ENST00000481098 RBM19Q9Y4C8 960 aaKnown RBP11.36□□□□□ -0.59
GTF3C3-211ENST00000481098 SLC35F4A4IF30 521 aa11.35□□□□□ -0.59
GTF3C3-211ENST00000481098 DPYDQ12882 1025 aa11.35□□□□□ -0.59
GTF3C3-211ENST00000481098 TAS1R3Q7RTX0 852 aa11.35□□□□□ -0.59
GTF3C3-211ENST00000481098 NXF1Q9UBU9 619 aaKnown RBP11.35□□□□□ -0.59
GTF3C3-211ENST00000481098 PPP1R15AO75807 674 aaPredicted RBP11.34□□□□□ -0.59
GTF3C3-211ENST00000481098 POU4F2Q12837 409 aa11.34□□□□□ -0.59
GTF3C3-211ENST00000481098 GNASQ5JWF2 1037 aa11.34□□□□□ -0.59
GTF3C3-211ENST00000481098 SFI1A8K8P3 1242 aa11.33□□□□□ -0.6
GTF3C3-211ENST00000481098 GTF2E1P29083 439 aaPredicted RBP11.33□□□□□ -0.6
GTF3C3-211ENST00000481098 TMEM214Q6NUQ4 689 aaKnown RBP11.33□□□□□ -0.6
GTF3C3-211ENST00000481098 C4orf17Q53FE4 359 aa11.32□□□□□ -0.6
GTF3C3-211ENST00000481098 CDCA8Q53HL2 280 aa11.32□□□□□ -0.6
GTF3C3-211ENST00000481098 ZMIZ1Q9ULJ6 1067 aa11.32□□□□□ -0.6
GTF3C3-211ENST00000481098 NOVA2Q9UNW9 492 aaKnown RBP11.32□□□□□ -0.6
GTF3C3-211ENST00000481098 DYRK1BQ9Y463 629 aa11.32□□□□□ -0.6
GTF3C3-211ENST00000481098 USP3Q9Y6I4 520 aa11.32□□□□□ -0.6
GTF3C3-211ENST00000481098 RHOQP17081 205 aa11.31□□□□□ -0.6
GTF3C3-211ENST00000481098 TNS4Q8IZW8 715 aa11.31□□□□□ -0.6
GTF3C3-211ENST00000481098 CCDC155Q8N6L0 562 aa11.31□□□□□ -0.6
GTF3C3-211ENST00000481098 TSEN2Q8NCE0 465 aaKnown RBP11.31□□□□□ -0.6
GTF3C3-211ENST00000481098 TERTO14746 1132 aaKnown RBP11.3□□□□□ -0.6
GTF3C3-211ENST00000481098 ZNF775Q96BV0 537 aaPredicted RBP11.3□□□□□ -0.6
GTF3C3-211ENST00000481098 NIFKQ9BYG3 293 aaKnown RBP11.3□□□□□ -0.6
GTF3C3-211ENST00000481098 H3BM21 787 aa11.29□□□□□ -0.6
GTF3C3-211ENST00000481098 PPFIA3O75145 1194 aa11.29□□□□□ -0.6
GTF3C3-211ENST00000481098 POTEAQ6S8J7 498 aa11.29□□□□□ -0.6
GTF3C3-211ENST00000481098 SLC9A9Q8IVB4 645 aa11.29□□□□□ -0.6
GTF3C3-211ENST00000481098 FAM200AQ8TCP9 573 aa11.29□□□□□ -0.6
GTF3C3-211ENST00000481098 TIMMDC1Q9NPL8 285 aa11.28□□□□□ -0.6
GTF3C3-211ENST00000481098 A0A1B0GTH6 734 aa11.27□□□□□ -0.61
GTF3C3-211ENST00000481098 NFX1Q12986 1120 aaKnown RBP11.27□□□□□ -0.61
GTF3C3-211ENST00000481098 TEAD4Q15561 434 aa11.27□□□□□ -0.61
GTF3C3-211ENST00000481098 SWI5Q1ZZU3 235 aa11.27□□□□□ -0.61
GTF3C3-211ENST00000481098 ACIN1Q9UKV3 1341 aaKnown RBP11.27□□□□□ -0.61
GTF3C3-211ENST00000481098 VSIG8P0DPA2 414 aa11.26□□□□□ -0.61
GTF3C3-211ENST00000481098 ITGA6P23229 1130 aa11.26□□□□□ -0.61
GTF3C3-211ENST00000481098 FAM69CQ0P6D2 419 aa11.26□□□□□ -0.61
GTF3C3-211ENST00000481098 GAS2L2Q8NHY3 880 aa11.26□□□□□ -0.61
GTF3C3-211ENST00000481098 STK32AQ8WU08 396 aa11.26□□□□□ -0.61
GTF3C3-211ENST00000481098 TSPAN10Q9H1Z9 355 aaPredicted RBP11.26□□□□□ -0.61
GTF3C3-211ENST00000481098 C21orf2O43822 256 aa11.25□□□□□ -0.61
GTF3C3-211ENST00000481098 HIRAP54198 1017 aaPredicted RBP11.25□□□□□ -0.61
GTF3C3-211ENST00000481098 PSMA6P60900 246 aaKnown RBP11.25□□□□□ -0.61
GTF3C3-211ENST00000481098 STAG2Q8N3U4 1231 aa11.25□□□□□ -0.61
GTF3C3-211ENST00000481098 ZDHHC1Q8WTX9 485 aa11.25□□□□□ -0.61
GTF3C3-211ENST00000481098 NANOS1Q8WY41 292 aaKnown RBP11.25□□□□□ -0.61
GTF3C3-211ENST00000481098 F11P03951 625 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms