RNA–Protein interactions for RNA: ENST00000480750.3

SRGAP3-206, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-206ENST00000480750 U2SURPO15042 1029 aaKnown RBP12.27□□□□□ -0.45
SRGAP3-206ENST00000480750 ATP6V1AP38606 617 aa12.27□□□□□ -0.45
SRGAP3-206ENST00000480750 SIK1P57059 783 aa12.27□□□□□ -0.45
SRGAP3-206ENST00000480750 FLAD1Q8NFF5 587 aa12.27□□□□□ -0.45
SRGAP3-206ENST00000480750 CFAP53Q96M91 514 aa12.27□□□□□ -0.45
SRGAP3-206ENST00000480750 FHDC1Q9C0D6 1143 aaPredicted RBP12.27□□□□□ -0.45
SRGAP3-206ENST00000480750 KDRP35968 1356 aa12.27□□□□□ -0.45
SRGAP3-206ENST00000480750 AMIGO3Q86WK7 504 aa12.26□□□□□ -0.45
SRGAP3-206ENST00000480750 RBM42Q9BTD8 480 aaKnown RBP12.26□□□□□ -0.45
SRGAP3-206ENST00000480750 CHD4Q14839 1912 aa12.25□□□□□ -0.45
SRGAP3-206ENST00000480750 PHF14O94880 888 aa12.25□□□□□ -0.45
SRGAP3-206ENST00000480750 COL23A1Q86Y22 540 aaPredicted RBP12.25□□□□□ -0.45
SRGAP3-206ENST00000480750 ATG3Q9NT62 314 aa12.25□□□□□ -0.45
SRGAP3-206ENST00000480750 KDM6AO15550 1401 aaPredicted RBP12.25□□□□□ -0.45
SRGAP3-206ENST00000480750 COL5A3P25940 1745 aaPredicted RBP12.24□□□□□ -0.45
SRGAP3-206ENST00000480750 ITPK1Q13572 414 aa12.24□□□□□ -0.45
SRGAP3-206ENST00000480750 ZNF831Q5JPB2 1677 aa12.24□□□□□ -0.45
SRGAP3-206ENST00000480750 AKAP4Q5JQC9 854 aa12.24□□□□□ -0.45
SRGAP3-206ENST00000480750 MSL1Q68DK7 614 aa12.24□□□□□ -0.45
SRGAP3-206ENST00000480750 LINC00116Q8NCU8 138 aa12.24□□□□□ -0.45
SRGAP3-206ENST00000480750 SGIP1Q9BQI5 828 aa12.24□□□□□ -0.45
SRGAP3-206ENST00000480750 SYT17Q9BSW7 474 aa12.24□□□□□ -0.45
SRGAP3-206ENST00000480750 LGR6Q9HBX8 967 aa12.24□□□□□ -0.45
SRGAP3-206ENST00000480750 PPP2R1AP30153 589 aa12.23□□□□□ -0.45
SRGAP3-206ENST00000480750 MTHFSDQ2M296 383 aaKnown RBP12.23□□□□□ -0.45
SRGAP3-206ENST00000480750 NFATC2IPQ8NCF5 419 aa12.23□□□□□ -0.45
SRGAP3-206ENST00000480750 SLC4A9Q96Q91 983 aa12.23□□□□□ -0.45
SRGAP3-206ENST00000480750 COL3A1P02461 1466 aaPredicted RBP12.22□□□□□ -0.45
SRGAP3-206ENST00000480750 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.22□□□□□ -0.45
SRGAP3-206ENST00000480750 GNPATO15228 680 aa12.22□□□□□ -0.45
SRGAP3-206ENST00000480750 ZEB1P37275 1124 aaPredicted RBP12.22□□□□□ -0.45
SRGAP3-206ENST00000480750 NUDCQ9Y266 331 aa12.22□□□□□ -0.45
SRGAP3-206ENST00000480750 MYH14Q7Z406 1995 aaKnown RBP12.21□□□□□ -0.45
SRGAP3-206ENST00000480750 UTRNP46939 3433 aa12.21□□□□□ -0.45
SRGAP3-206ENST00000480750 PTCD1O75127 700 aaKnown RBP12.21□□□□□ -0.45
SRGAP3-206ENST00000480750 SSFA2P28290 1259 aa12.21□□□□□ -0.45
SRGAP3-206ENST00000480750 DDX10Q13206 875 aaKnown RBP12.21□□□□□ -0.45
SRGAP3-206ENST00000480750 PELP1Q8IZL8 1130 aaKnown RBP12.21□□□□□ -0.45
SRGAP3-206ENST00000480750 SLC39A6Q13433 755 aa12.2□□□□□ -0.46
SRGAP3-206ENST00000480750 RTCBQ9Y3I0 505 aaKnown RBP12.2□□□□□ -0.46
SRGAP3-206ENST00000480750 GOLGB1Q14789 3259 aaKnown RBP12.2□□□□□ -0.46
SRGAP3-206ENST00000480750 TJP1Q07157 1748 aa12.2□□□□□ -0.46
SRGAP3-206ENST00000480750 MAP3K5Q99683 1374 aa12.19□□□□□ -0.46
SRGAP3-206ENST00000480750 RNMTO43148 476 aaKnown RBP12.19□□□□□ -0.46
SRGAP3-206ENST00000480750 YY1P25490 414 aa12.19□□□□□ -0.46
SRGAP3-206ENST00000480750 GPR162Q16538 588 aa12.19□□□□□ -0.46
SRGAP3-206ENST00000480750 GAS2L2Q8NHY3 880 aa12.19□□□□□ -0.46
SRGAP3-206ENST00000480750 PHACTR3Q96KR7 559 aa12.19□□□□□ -0.46
SRGAP3-206ENST00000480750 SLC52A2Q9HAB3 445 aa12.19□□□□□ -0.46
SRGAP3-206ENST00000480750 C4AP0C0L4 1744 aa12.18□□□□□ -0.46
SRGAP3-206ENST00000480750 U2AF1L5P0DN76 240 aaPredicted RBP12.18□□□□□ -0.46
SRGAP3-206ENST00000480750 U2AF1Q01081 240 aaKnown RBP eCLIP12.18□□□□□ -0.46
SRGAP3-206ENST00000480750 TRAPPC3LQ5T215 181 aa12.18□□□□□ -0.46
SRGAP3-206ENST00000480750 ADAMTS7Q9UKP4 1686 aa12.17□□□□□ -0.46
SRGAP3-206ENST00000480750 MRC1P22897 1456 aa12.17□□□□□ -0.46
SRGAP3-206ENST00000480750 GNAT3A8MTJ3 354 aa12.17□□□□□ -0.46
SRGAP3-206ENST00000480750 PRKAR2BP31323 418 aa12.17□□□□□ -0.46
SRGAP3-206ENST00000480750 TEFQ10587 303 aa12.17□□□□□ -0.46
SRGAP3-206ENST00000480750 SIPA1L3O60292 1781 aaPredicted RBP12.17□□□□□ -0.46
SRGAP3-206ENST00000480750 CNTNAP4Q9C0A0 1308 aa12.16□□□□□ -0.46
SRGAP3-206ENST00000480750 CICQ96RK0 1608 aaPredicted RBP12.16□□□□□ -0.46
SRGAP3-206ENST00000480750 UBR2Q8IWV8 1755 aa12.16□□□□□ -0.46
SRGAP3-206ENST00000480750 DLG5Q8TDM6 1919 aa12.16□□□□□ -0.46
SRGAP3-206ENST00000480750 NEFMP07197 916 aa12.16□□□□□ -0.46
SRGAP3-206ENST00000480750 RFC4P35249 363 aa12.16□□□□□ -0.46
SRGAP3-206ENST00000480750 RC3H1Q5TC82 1133 aaKnown RBP12.16□□□□□ -0.46
SRGAP3-206ENST00000480750 TTC5Q8N0Z6 440 aa12.16□□□□□ -0.46
SRGAP3-206ENST00000480750 IL17REQ8NFR9 667 aa12.15□□□□□ -0.46
SRGAP3-206ENST00000480750 NLGN2Q8NFZ4 835 aa12.15□□□□□ -0.46
SRGAP3-206ENST00000480750 RSPH6AQ9H0K4 717 aa12.15□□□□□ -0.46
SRGAP3-206ENST00000480750 RPS6KA4O75676 772 aa12.14□□□□□ -0.47
SRGAP3-206ENST00000480750 CRKLP46109 303 aaKnown RBP12.14□□□□□ -0.47
SRGAP3-206ENST00000480750 DNAJC10Q8IXB1 793 aa12.14□□□□□ -0.47
SRGAP3-206ENST00000480750 RTF1Q92541 710 aaKnown RBP12.14□□□□□ -0.47
SRGAP3-206ENST00000480750 WWC3Q9ULE0 1092 aa12.14□□□□□ -0.47
SRGAP3-206ENST00000480750 KCNQ3O43525 872 aa12.13□□□□□ -0.47
SRGAP3-206ENST00000480750 DCTN1Q14203 1278 aa12.13□□□□□ -0.47
SRGAP3-206ENST00000480750 ARHGEF1Q92888 912 aaKnown RBP12.13□□□□□ -0.47
SRGAP3-206ENST00000480750 CD2APQ9Y5K6 639 aa12.13□□□□□ -0.47
SRGAP3-206ENST00000480750 KCPQ6ZWJ8 1503 aa12.12□□□□□ -0.47
SRGAP3-206ENST00000480750 FCHSD2O94868 740 aa12.12□□□□□ -0.47
SRGAP3-206ENST00000480750 MMP10P09238 476 aa12.12□□□□□ -0.47
SRGAP3-206ENST00000480750 NLGN1Q8N2Q7 840 aa12.12□□□□□ -0.47
SRGAP3-206ENST00000480750 N4BP2Q86UW6 1770 aaPredicted RBP12.12□□□□□ -0.47
SRGAP3-206ENST00000480750 MCM10Q7L590 875 aa12.11□□□□□ -0.47
SRGAP3-206ENST00000480750 CCDC87Q9NVE4 849 aa12.11□□□□□ -0.47
SRGAP3-206ENST00000480750 SRP68Q9UHB9 627 aaKnown RBP12.11□□□□□ -0.47
SRGAP3-206ENST00000480750 KIF13BQ9NQT8 1826 aa12.11□□□□□ -0.47
SRGAP3-206ENST00000480750 GRIN3BO60391 1043 aa12.1□□□□□ -0.47
SRGAP3-206ENST00000480750 ZPR1O75312 459 aa12.1□□□□□ -0.47
SRGAP3-206ENST00000480750 VSIG10Q8N0Z9 540 aa12.1□□□□□ -0.47
SRGAP3-206ENST00000480750 PNNQ9H307 717 aaKnown RBP12.1□□□□□ -0.47
SRGAP3-206ENST00000480750 PARP3Q9Y6F1 533 aa12.1□□□□□ -0.47
SRGAP3-206ENST00000480750 BTBD11A6QL63 1104 aa12.09□□□□□ -0.47
SRGAP3-206ENST00000480750 STARD3NLO95772 234 aa12.09□□□□□ -0.47
SRGAP3-206ENST00000480750 GYS1P13807 737 aa12.09□□□□□ -0.47
SRGAP3-206ENST00000480750 RALBP1Q15311 655 aa12.09□□□□□ -0.47
SRGAP3-206ENST00000480750 INTS5Q6P9B9 1019 aaKnown RBP12.09□□□□□ -0.47
SRGAP3-206ENST00000480750 ZNF790Q6PG37 636 aa12.09□□□□□ -0.47
SRGAP3-206ENST00000480750 NPM2Q86SE8 214 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms