RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 USP17L18D6R9N7 530 aa10.35□□□□□ -0.75
CALD1-219ENST00000480638 USP17L22D6RA61 530 aa10.35□□□□□ -0.75
CALD1-219ENST00000480638 USP17L17D6RBQ6 530 aa10.35□□□□□ -0.75
CALD1-219ENST00000480638 USP17L19D6RCP7 530 aa10.35□□□□□ -0.75
CALD1-219ENST00000480638 USP17L20D6RJB6 530 aa10.35□□□□□ -0.75
CALD1-219ENST00000480638 USP17L24Q0WX57 530 aa10.35□□□□□ -0.75
CALD1-219ENST00000480638 TPCN2Q8NHX9 752 aa10.35□□□□□ -0.75
CALD1-219ENST00000480638 FIGNL2A6NMB9 653 aa10.34□□□□□ -0.75
CALD1-219ENST00000480638 SRPK2P78362 688 aaKnown RBP10.34□□□□□ -0.75
CALD1-219ENST00000480638 PTK7Q13308 1070 aa10.34□□□□□ -0.75
CALD1-219ENST00000480638 CCDC102BQ68D86 513 aa10.34□□□□□ -0.75
CALD1-219ENST00000480638 LARP1Q6PKG0 1096 aaKnown RBP10.34□□□□□ -0.75
CALD1-219ENST00000480638 FHDC1Q9C0D6 1143 aaPredicted RBP10.34□□□□□ -0.75
CALD1-219ENST00000480638 ZNF358Q9NW07 568 aa10.34□□□□□ -0.75
CALD1-219ENST00000480638 DKK1O94907 266 aa10.33□□□□□ -0.76
CALD1-219ENST00000480638 CENPCQ03188 943 aa10.33□□□□□ -0.76
CALD1-219ENST00000480638 TLR1Q15399 786 aa10.33□□□□□ -0.76
CALD1-219ENST00000480638 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.33□□□□□ -0.76
CALD1-219ENST00000480638 CDCA8Q53HL2 280 aa10.33□□□□□ -0.76
CALD1-219ENST00000480638 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.33□□□□□ -0.76
CALD1-219ENST00000480638 SERTAD1Q9UHV2 236 aa10.33□□□□□ -0.76
CALD1-219ENST00000480638 SLC27A3Q5K4L6 730 aa10.32□□□□□ -0.76
CALD1-219ENST00000480638 PBXIP1Q96AQ6 731 aa10.32□□□□□ -0.76
CALD1-219ENST00000480638 GRIP2Q9C0E4 1043 aa10.32□□□□□ -0.76
CALD1-219ENST00000480638 LYSMD3Q7Z3D4 306 aa10.31□□□□□ -0.76
CALD1-219ENST00000480638 SLC4A9Q96Q91 983 aa10.31□□□□□ -0.76
CALD1-219ENST00000480638 BACH1O14867 736 aa10.3□□□□□ -0.76
CALD1-219ENST00000480638 SMTNP53814 917 aa10.3□□□□□ -0.76
CALD1-219ENST00000480638 ZSCAN10Q96SZ4 725 aaPredicted RBP10.3□□□□□ -0.76
CALD1-219ENST00000480638 ARID3AQ99856 593 aa10.3□□□□□ -0.76
CALD1-219ENST00000480638 SFI1A8K8P3 1242 aa10.29□□□□□ -0.76
CALD1-219ENST00000480638 MTFR1Q15390 333 aa10.29□□□□□ -0.76
CALD1-219ENST00000480638 PRICKLE2Q7Z3G6 844 aa10.29□□□□□ -0.76
CALD1-219ENST00000480638 ANKMY2Q8IV38 441 aa10.29□□□□□ -0.76
CALD1-219ENST00000480638 RBM19Q9Y4C8 960 aaKnown RBP10.29□□□□□ -0.76
CALD1-219ENST00000480638 DPYDQ12882 1025 aa10.28□□□□□ -0.76
CALD1-219ENST00000480638 ARXQ96QS3 562 aa10.28□□□□□ -0.76
CALD1-219ENST00000480638 A6NJY4 79 aa10.27□□□□□ -0.77
CALD1-219ENST00000480638 SPATA31C2B4DYI2 1134 aa10.27□□□□□ -0.77
CALD1-219ENST00000480638 M0R2N6 131 aa10.27□□□□□ -0.77
CALD1-219ENST00000480638 EPHA4P54764 986 aa10.27□□□□□ -0.77
CALD1-219ENST00000480638 SEC13P55735 322 aa10.27□□□□□ -0.77
CALD1-219ENST00000480638 NOVA2Q9UNW9 492 aaKnown RBP10.27□□□□□ -0.77
CALD1-219ENST00000480638 ATG7O95352 703 aa10.26□□□□□ -0.77
CALD1-219ENST00000480638 RHOQP17081 205 aa10.26□□□□□ -0.77
CALD1-219ENST00000480638 PTSQ03393 145 aa10.26□□□□□ -0.77
CALD1-219ENST00000480638 POU4F2Q12837 409 aa10.26□□□□□ -0.77
CALD1-219ENST00000480638 ELOAQ14241 798 aaKnown RBP10.26□□□□□ -0.77
CALD1-219ENST00000480638 TMEM214Q6NUQ4 689 aaKnown RBP10.26□□□□□ -0.77
CALD1-219ENST00000480638 PPARGC1BQ86YN6 1023 aaKnown RBP10.26□□□□□ -0.77
CALD1-219ENST00000480638 ZMIZ1Q9ULJ6 1067 aa10.26□□□□□ -0.77
CALD1-219ENST00000480638 GTF2E1P29083 439 aaPredicted RBP10.25□□□□□ -0.77
CALD1-219ENST00000480638 GNASQ5JWF2 1037 aa10.25□□□□□ -0.77
CALD1-219ENST00000480638 NBPF10Q6P3W6 841 aaKnown RBP10.25□□□□□ -0.77
CALD1-219ENST00000480638 TAS1R3Q7RTX0 852 aa10.25□□□□□ -0.77
CALD1-219ENST00000480638 NBPF15Q8N660 670 aa10.25□□□□□ -0.77
CALD1-219ENST00000480638 TSEN2Q8NCE0 465 aaKnown RBP10.25□□□□□ -0.77
CALD1-219ENST00000480638 RHBDD1Q8TEB9 315 aa10.25□□□□□ -0.77
CALD1-219ENST00000480638 IQSEC3Q9UPP2 1182 aaPredicted RBP10.25□□□□□ -0.77
CALD1-219ENST00000480638 USP3Q9Y6I4 520 aa10.25□□□□□ -0.77
CALD1-219ENST00000480638 SENP3-EIF4A1A0A087X0R7 540 aa10.24□□□□□ -0.77
CALD1-219ENST00000480638 FOXK2Q01167 660 aa10.24□□□□□ -0.77
CALD1-219ENST00000480638 TNS4Q8IZW8 715 aa10.24□□□□□ -0.77
CALD1-219ENST00000480638 SCHIP1Q9P0W5 487 aaPredicted RBP10.24□□□□□ -0.77
CALD1-219ENST00000480638 CDK2AP1O14519 115 aa10.23□□□□□ -0.77
CALD1-219ENST00000480638 PPP1R15AO75807 674 aaPredicted RBP10.23□□□□□ -0.77
CALD1-219ENST00000480638 C4orf17Q53FE4 359 aa10.23□□□□□ -0.77
CALD1-219ENST00000480638 FAM200AQ8TCP9 573 aa10.23□□□□□ -0.77
CALD1-219ENST00000480638 STK32AQ8WU08 396 aa10.23□□□□□ -0.77
CALD1-219ENST00000480638 SLC35F4A4IF30 521 aa10.22□□□□□ -0.77
CALD1-219ENST00000480638 WDR44Q5JSH3 913 aa10.22□□□□□ -0.77
CALD1-219ENST00000480638 ZNF295-AS1Q8N0V1 137 aa10.22□□□□□ -0.77
CALD1-219ENST00000480638 PHKA2P46019 1235 aa10.21□□□□□ -0.77
CALD1-219ENST00000480638 SLC9A9Q8IVB4 645 aa10.21□□□□□ -0.77
CALD1-219ENST00000480638 TSPAN10Q9H1Z9 355 aaPredicted RBP10.21□□□□□ -0.77
CALD1-219ENST00000480638 NXF1Q9UBU9 619 aaKnown RBP10.21□□□□□ -0.77
CALD1-219ENST00000480638 TBCELQ5QJ74 424 aa10.2□□□□□ -0.78
CALD1-219ENST00000480638 CCDC155Q8N6L0 562 aa10.2□□□□□ -0.78
CALD1-219ENST00000480638 NIFKQ9BYG3 293 aaKnown RBP10.2□□□□□ -0.78
CALD1-219ENST00000480638 PLA2G4AP47712 749 aa10.19□□□□□ -0.78
CALD1-219ENST00000480638 TMEM164Q5U3C3 297 aa10.19□□□□□ -0.78
CALD1-219ENST00000480638 TIMMDC1Q9NPL8 285 aa10.19□□□□□ -0.78
CALD1-219ENST00000480638 ACIN1Q9UKV3 1341 aaKnown RBP10.18□□□□□ -0.78
CALD1-219ENST00000480638 PPFIA3O75145 1194 aa10.18□□□□□ -0.78
CALD1-219ENST00000480638 LGR5O75473 907 aa10.18□□□□□ -0.78
CALD1-219ENST00000480638 HINFPQ9BQA5 517 aa10.18□□□□□ -0.78
CALD1-219ENST00000480638 CABP1Q9NZU7 370 aa10.18□□□□□ -0.78
CALD1-219ENST00000480638 DYRK1BQ9Y463 629 aa10.18□□□□□ -0.78
CALD1-219ENST00000480638 TERTO14746 1132 aaKnown RBP10.17□□□□□ -0.78
CALD1-219ENST00000480638 VEGFBP49765 207 aa10.17□□□□□ -0.78
CALD1-219ENST00000480638 NPAS3Q8IXF0 933 aa10.17□□□□□ -0.78
CALD1-219ENST00000480638 ZDHHC1Q8WTX9 485 aa10.17□□□□□ -0.78
CALD1-219ENST00000480638 ZNF775Q96BV0 537 aaPredicted RBP10.17□□□□□ -0.78
CALD1-219ENST00000480638 A0A1B0GTH6 734 aa10.16□□□□□ -0.78
CALD1-219ENST00000480638 C21orf2O43822 256 aa10.16□□□□□ -0.78
CALD1-219ENST00000480638 FAM69CQ0P6D2 419 aa10.16□□□□□ -0.78
CALD1-219ENST00000480638 SWI5Q1ZZU3 235 aa10.16□□□□□ -0.78
CALD1-219ENST00000480638 H3BM21 787 aa10.15□□□□□ -0.78
CALD1-219ENST00000480638 ITGA6P23229 1130 aa10.15□□□□□ -0.78
CALD1-219ENST00000480638 PSMA6P60900 246 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms