RNA–Protein interactions for RNA: ENST00000480609.1

COL4A2-206, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 2

Gene COL4A2, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-206ENST00000480609 HOXB7P09629 217 aa17.08■□□□□ 0.32
COL4A2-206ENST00000480609 MARCH10Q8NA82 808 aaPredicted RBP17.08■□□□□ 0.32
COL4A2-206ENST00000480609 DDX54Q8TDD1 881 aaKnown RBP17.07■□□□□ 0.32
COL4A2-206ENST00000480609 RGS17Q9UGC6 210 aaPredicted RBP17.07■□□□□ 0.32
COL4A2-206ENST00000480609 TOGARAM1Q9Y4F4 1720 aa17.07■□□□□ 0.32
COL4A2-206ENST00000480609 BRPF1P55201 1214 aaPredicted RBP17.06■□□□□ 0.32
COL4A2-206ENST00000480609 TSR2Q969E8 191 aaKnown RBP17.06■□□□□ 0.32
COL4A2-206ENST00000480609 CHMP4AQ9BY43 222 aa17.06■□□□□ 0.32
COL4A2-206ENST00000480609 TSPYL4Q9UJ04 414 aa17.06■□□□□ 0.32
COL4A2-206ENST00000480609 CABP4P57796 275 aa17.05■□□□□ 0.32
COL4A2-206ENST00000480609 SEPT12Q8IYM1 358 aa17.05■□□□□ 0.32
COL4A2-206ENST00000480609 PAPPAQ13219 1627 aa17.04■□□□□ 0.32
COL4A2-206ENST00000480609 BTBD11A6QL63 1104 aa17.04■□□□□ 0.32
COL4A2-206ENST00000480609 EIF4A1P60842 406 aaKnown RBP17.04■□□□□ 0.32
COL4A2-206ENST00000480609 EXOSC9Q06265 439 aaKnown RBP17.04■□□□□ 0.32
COL4A2-206ENST00000480609 ZNF790Q6PG37 636 aa17.04■□□□□ 0.32
COL4A2-206ENST00000480609 NFATC2IPQ8NCF5 419 aa17.04■□□□□ 0.32
COL4A2-206ENST00000480609 VAMP4O75379 141 aa17.03■□□□□ 0.32
COL4A2-206ENST00000480609 ALDH1L2Q3SY69 923 aa17.03■□□□□ 0.32
COL4A2-206ENST00000480609 RCAN3Q9UKA8 241 aa17.03■□□□□ 0.32
COL4A2-206ENST00000480609 RXRBP28702 533 aa17.01■□□□□ 0.31
COL4A2-206ENST00000480609 ILDR1Q86SU0 546 aaPredicted RBP17.01■□□□□ 0.31
COL4A2-206ENST00000480609 LAS1LQ9Y4W2 734 aaKnown RBP17.01■□□□□ 0.31
COL4A2-206ENST00000480609 UBR2Q8IWV8 1755 aa17.01■□□□□ 0.31
COL4A2-206ENST00000480609 ITGB4P16144 1822 aa17■□□□□ 0.31
COL4A2-206ENST00000480609 RARSP54136 660 aaKnown RBP17■□□□□ 0.31
COL4A2-206ENST00000480609 C8orf58Q8NAV2 365 aa17■□□□□ 0.31
COL4A2-206ENST00000480609 TMOD3Q9NYL9 352 aa17■□□□□ 0.31
COL4A2-206ENST00000480609 TWISTNBQ3B726 338 aaPredicted RBP16.99■□□□□ 0.31
COL4A2-206ENST00000480609 VSIG10Q8N0Z9 540 aa16.99■□□□□ 0.31
COL4A2-206ENST00000480609 PIGBQ92521 554 aa16.99■□□□□ 0.31
COL4A2-206ENST00000480609 MIS18AQ9NYP9 233 aa16.99■□□□□ 0.31
COL4A2-206ENST00000480609 DOT1LQ8TEK3 1739 aa16.99■□□□□ 0.31
COL4A2-206ENST00000480609 KCPQ6ZWJ8 1503 aa16.98■□□□□ 0.31
COL4A2-206ENST00000480609 GIGYF1O75420 1035 aaPredicted RBP16.98■□□□□ 0.31
COL4A2-206ENST00000480609 POTEAQ6S8J7 498 aa16.98■□□□□ 0.31
COL4A2-206ENST00000480609 TSPYL6Q8N831 410 aa16.98■□□□□ 0.31
COL4A2-206ENST00000480609 CICQ96RK0 1608 aaPredicted RBP16.98■□□□□ 0.31
COL4A2-206ENST00000480609 KRT27Q7Z3Y8 459 aa16.97■□□□□ 0.31
COL4A2-206ENST00000480609 FMNL2Q96PY5 1086 aa16.97■□□□□ 0.31
COL4A2-206ENST00000480609 NHSQ6T4R5 1651 aa16.97■□□□□ 0.31
COL4A2-206ENST00000480609 CACNA1FO60840 1977 aa16.97■□□□□ 0.31
COL4A2-206ENST00000480609 KCNQ3O43525 872 aa16.96■□□□□ 0.31
COL4A2-206ENST00000480609 PRIM1P49642 420 aaKnown RBP16.96■□□□□ 0.31
COL4A2-206ENST00000480609 FAM196AQ6ZSG2 479 aa16.96■□□□□ 0.31
COL4A2-206ENST00000480609 TTC5Q8N0Z6 440 aa16.96■□□□□ 0.31
COL4A2-206ENST00000480609 ZNF831Q5JPB2 1677 aa16.96■□□□□ 0.31
COL4A2-206ENST00000480609 RGS12O14924 1447 aa16.96■□□□□ 0.3
COL4A2-206ENST00000480609 SNRPA1P09661 255 aaKnown RBP16.95■□□□□ 0.3
COL4A2-206ENST00000480609 SMARCC1Q92922 1105 aaPredicted RBP16.95■□□□□ 0.3
COL4A2-206ENST00000480609 ZNF496Q96IT1 587 aaPredicted RBP16.95■□□□□ 0.3
COL4A2-206ENST00000480609 ATG3Q9NT62 314 aa16.95■□□□□ 0.3
COL4A2-206ENST00000480609 ERBB4Q15303 1308 aa16.95■□□□□ 0.3
COL4A2-206ENST00000480609 BRWD3Q6RI45 1802 aa16.94■□□□□ 0.3
COL4A2-206ENST00000480609 SBF2Q86WG5 1849 aa16.94■□□□□ 0.3
COL4A2-206ENST00000480609 ARHGAP45Q92619 1136 aa16.94■□□□□ 0.3
COL4A2-206ENST00000480609 A0A0G2JS52 829 aa16.93■□□□□ 0.3
COL4A2-206ENST00000480609 MYT1Q01538 1121 aa16.93■□□□□ 0.3
COL4A2-206ENST00000480609 SLC39A6Q13433 755 aa16.93■□□□□ 0.3
COL4A2-206ENST00000480609 KRT24Q2M2I5 525 aa16.93■□□□□ 0.3
COL4A2-206ENST00000480609 SSH1Q8WYL5 1049 aa16.93■□□□□ 0.3
COL4A2-206ENST00000480609 TEX13AQ9BXU3 409 aaPredicted RBP16.93■□□□□ 0.3
COL4A2-206ENST00000480609 KIF16BQ96L93 1317 aa16.93■□□□□ 0.3
COL4A2-206ENST00000480609 CCDC30Q5VVM6 783 aa16.92■□□□□ 0.3
COL4A2-206ENST00000480609 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.92■□□□□ 0.3
COL4A2-206ENST00000480609 BCL11BQ9C0K0 894 aaPredicted RBP16.92■□□□□ 0.3
COL4A2-206ENST00000480609 RRP1P56182 461 aaKnown RBP16.91■□□□□ 0.3
COL4A2-206ENST00000480609 MRPL50Q8N5N7 158 aaKnown RBP16.91■□□□□ 0.3
COL4A2-206ENST00000480609 ASAP1Q9ULH1 1129 aa16.91■□□□□ 0.3
COL4A2-206ENST00000480609 LAMB4A4D0S4 1761 aa16.9■□□□□ 0.3
COL4A2-206ENST00000480609 SUPT16HQ9Y5B9 1047 aaKnown RBP16.9■□□□□ 0.3
COL4A2-206ENST00000480609 ELL2O00472 640 aaPredicted RBP16.89■□□□□ 0.29
COL4A2-206ENST00000480609 BCAR3O75815 825 aa16.89■□□□□ 0.29
COL4A2-206ENST00000480609 HMGB2P26583 209 aaKnown RBP16.89■□□□□ 0.29
COL4A2-206ENST00000480609 PDE3AQ14432 1141 aa16.89■□□□□ 0.29
COL4A2-206ENST00000480609 HDGFL1Q5TGJ6 251 aa16.89■□□□□ 0.29
COL4A2-206ENST00000480609 KAT6BQ8WYB5 2073 aa16.89■□□□□ 0.29
COL4A2-206ENST00000480609 KCNQ2O43526 872 aa16.88■□□□□ 0.29
COL4A2-206ENST00000480609 ERICH6BQ5W0A0 696 aa16.88■□□□□ 0.29
COL4A2-206ENST00000480609 SMC4Q9NTJ3 1288 aa16.88■□□□□ 0.29
COL4A2-206ENST00000480609 DBF4Q9UBU7 674 aaPredicted RBP16.88■□□□□ 0.29
COL4A2-206ENST00000480609 PTPRCP08575 1304 aa16.88■□□□□ 0.29
COL4A2-206ENST00000480609 PALLDQ8WX93 1383 aa16.88■□□□□ 0.29
COL4A2-206ENST00000480609 IPO8O15397 1037 aaKnown RBP16.87■□□□□ 0.29
COL4A2-206ENST00000480609 MS4A1P11836 297 aa16.87■□□□□ 0.29
COL4A2-206ENST00000480609 ACSBG1Q96GR2 724 aa16.87■□□□□ 0.29
COL4A2-206ENST00000480609 STK31Q9BXU1 1019 aa16.87■□□□□ 0.29
COL4A2-206ENST00000480609 DDX21Q9NR30 783 aaKnown RBP eCLIP16.87■□□□□ 0.29
COL4A2-206ENST00000480609 BTAF1O14981 1849 aa16.86■□□□□ 0.29
COL4A2-206ENST00000480609 C5P01031 1676 aa16.86■□□□□ 0.29
COL4A2-206ENST00000480609 PDIA6Q15084 440 aa16.86■□□□□ 0.29
COL4A2-206ENST00000480609 LRP10Q7Z4F1 713 aa16.86■□□□□ 0.29
COL4A2-206ENST00000480609 SYTL4Q96C24 671 aaPredicted RBP16.86■□□□□ 0.29
COL4A2-206ENST00000480609 SLC4A9Q96Q91 983 aa16.86■□□□□ 0.29
COL4A2-206ENST00000480609 USP16Q9Y5T5 823 aa16.86■□□□□ 0.29
COL4A2-206ENST00000480609 IBTKQ9P2D0 1353 aaPredicted RBP16.86■□□□□ 0.29
COL4A2-206ENST00000480609 LOC102724428A0A0B4J2F2 783 aa16.85■□□□□ 0.29
COL4A2-206ENST00000480609 SIK1P57059 783 aa16.85■□□□□ 0.29
COL4A2-206ENST00000480609 ZKSCAN2Q63HK3 967 aa16.85■□□□□ 0.29
COL4A2-206ENST00000480609 HYPKQ9NX55 129 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms