RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 FHDC1Q9C0D6 1143 aaPredicted RBP20.22■□□□□ 0.83
TDP2-205ENST00000480495 TAF1LQ8IZX4 1826 aa20.22■□□□□ 0.83
TDP2-205ENST00000480495 C4BP0C0L5 1744 aa20.22■□□□□ 0.83
TDP2-205ENST00000480495 LINC00116Q8NCU8 138 aa20.21■□□□□ 0.83
TDP2-205ENST00000480495 SYT17Q9BSW7 474 aa20.21■□□□□ 0.83
TDP2-205ENST00000480495 MAP3K5Q99683 1374 aa20.21■□□□□ 0.83
TDP2-205ENST00000480495 U2SURPO15042 1029 aaKnown RBP20.2■□□□□ 0.82
TDP2-205ENST00000480495 ITPK1Q13572 414 aa20.2■□□□□ 0.82
TDP2-205ENST00000480495 NFATC2IPQ8NCF5 419 aa20.19■□□□□ 0.82
TDP2-205ENST00000480495 RBM42Q9BTD8 480 aaKnown RBP20.19■□□□□ 0.82
TDP2-205ENST00000480495 COL24A1Q17RW2 1714 aa20.19■□□□□ 0.82
TDP2-205ENST00000480495 SSFA2P28290 1259 aa20.18■□□□□ 0.82
TDP2-205ENST00000480495 PPP2R1AP30153 589 aa20.18■□□□□ 0.82
TDP2-205ENST00000480495 MTHFSDQ2M296 383 aaKnown RBP20.18■□□□□ 0.82
TDP2-205ENST00000480495 NUDCQ9Y266 331 aa20.17■□□□□ 0.82
TDP2-205ENST00000480495 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.16■□□□□ 0.82
TDP2-205ENST00000480495 SLC4A9Q96Q91 983 aa20.16■□□□□ 0.82
TDP2-205ENST00000480495 SLC52A2Q9HAB3 445 aa20.16■□□□□ 0.82
TDP2-205ENST00000480495 ZNF831Q5JPB2 1677 aa20.16■□□□□ 0.82
TDP2-205ENST00000480495 GNPATO15228 680 aa20.15■□□□□ 0.82
TDP2-205ENST00000480495 RNMTO43148 476 aaKnown RBP20.15■□□□□ 0.82
TDP2-205ENST00000480495 LGR6Q9HBX8 967 aa20.15■□□□□ 0.82
TDP2-205ENST00000480495 PHF14O94880 888 aa20.14■□□□□ 0.81
TDP2-205ENST00000480495 RC3H1Q5TC82 1133 aaKnown RBP20.14■□□□□ 0.81
TDP2-205ENST00000480495 AMIGO3Q86WK7 504 aa20.14■□□□□ 0.81
TDP2-205ENST00000480495 GAS2L2Q8NHY3 880 aa20.14■□□□□ 0.81
TDP2-205ENST00000480495 SCN11AQ9UI33 1791 aa20.13■□□□□ 0.81
TDP2-205ENST00000480495 PTCD1O75127 700 aaKnown RBP20.13■□□□□ 0.81
TDP2-205ENST00000480495 MSL1Q68DK7 614 aa20.13■□□□□ 0.81
TDP2-205ENST00000480495 UBR3Q6ZT12 1888 aa20.13■□□□□ 0.81
TDP2-205ENST00000480495 MRC1P22897 1456 aa20.12■□□□□ 0.81
TDP2-205ENST00000480495 CNTNAP4Q9C0A0 1308 aa20.12■□□□□ 0.81
TDP2-205ENST00000480495 RTCBQ9Y3I0 505 aaKnown RBP20.12■□□□□ 0.81
TDP2-205ENST00000480495 RSPH6AQ9H0K4 717 aa20.11■□□□□ 0.81
TDP2-205ENST00000480495 ADRA2BP18089 450 aa20.1■□□□□ 0.81
TDP2-205ENST00000480495 SMIM5Q71RC9 77 aa20.1■□□□□ 0.81
TDP2-205ENST00000480495 KLHL34Q8N239 644 aa20.1■□□□□ 0.81
TDP2-205ENST00000480495 ADAMTS7Q9UKP4 1686 aa20.1■□□□□ 0.81
TDP2-205ENST00000480495 GNAT3A8MTJ3 354 aa20.09■□□□□ 0.81
TDP2-205ENST00000480495 U2AF1L5P0DN76 240 aaPredicted RBP20.09■□□□□ 0.81
TDP2-205ENST00000480495 PRKAR2BP31323 418 aa20.09■□□□□ 0.81
TDP2-205ENST00000480495 U2AF1Q01081 240 aaKnown RBP eCLIP20.09■□□□□ 0.81
TDP2-205ENST00000480495 TRAPPC3LQ5T215 181 aa20.09■□□□□ 0.81
TDP2-205ENST00000480495 RPS6KA4O75676 772 aa20.08■□□□□ 0.81
TDP2-205ENST00000480495 FCHSD2O94868 740 aa20.08■□□□□ 0.81
TDP2-205ENST00000480495 COL5A3P25940 1745 aaPredicted RBP20.06■□□□□ 0.8
TDP2-205ENST00000480495 CRKLP46109 303 aaKnown RBP20.06■□□□□ 0.8
TDP2-205ENST00000480495 TEFQ10587 303 aa20.06■□□□□ 0.8
TDP2-205ENST00000480495 PHACTR3Q96KR7 559 aa20.06■□□□□ 0.8
TDP2-205ENST00000480495 CICQ96RK0 1608 aaPredicted RBP20.05■□□□□ 0.8
TDP2-205ENST00000480495 SLC39A6Q13433 755 aa20.05■□□□□ 0.8
TDP2-205ENST00000480495 IL17REQ8NFR9 667 aa20.05■□□□□ 0.8
TDP2-205ENST00000480495 ARHGEF1Q92888 912 aaKnown RBP20.05■□□□□ 0.8
TDP2-205ENST00000480495 CD2APQ9Y5K6 639 aa20.05■□□□□ 0.8
TDP2-205ENST00000480495 YY1P25490 414 aa20.04■□□□□ 0.8
TDP2-205ENST00000480495 VSIG10Q8N0Z9 540 aa20.04■□□□□ 0.8
TDP2-205ENST00000480495 NLGN2Q8NFZ4 835 aa20.04■□□□□ 0.8
TDP2-205ENST00000480495 RFC4P35249 363 aa20.03■□□□□ 0.8
TDP2-205ENST00000480495 RALBP1Q15311 655 aa20.03■□□□□ 0.8
TDP2-205ENST00000480495 GPR162Q16538 588 aa20.03■□□□□ 0.8
TDP2-205ENST00000480495 DNAJC10Q8IXB1 793 aa20.03■□□□□ 0.8
TDP2-205ENST00000480495 NLGN1Q8N2Q7 840 aa20.03■□□□□ 0.8
TDP2-205ENST00000480495 DDX10Q13206 875 aaKnown RBP20.02■□□□□ 0.8
TDP2-205ENST00000480495 TTC5Q8N0Z6 440 aa20.02■□□□□ 0.8
TDP2-205ENST00000480495 CEMIPQ8WUJ3 1361 aa20.02■□□□□ 0.8
TDP2-205ENST00000480495 TJP1Q07157 1748 aa20.02■□□□□ 0.79
TDP2-205ENST00000480495 KCPQ6ZWJ8 1503 aa20.02■□□□□ 0.79
TDP2-205ENST00000480495 INTS5Q6P9B9 1019 aaKnown RBP20.01■□□□□ 0.79
TDP2-205ENST00000480495 CCDC87Q9NVE4 849 aa20.01■□□□□ 0.79
TDP2-205ENST00000480495 VIRMAQ69YN4 1812 aaKnown RBP20.01■□□□□ 0.79
TDP2-205ENST00000480495 CYP19A1P11511 503 aaPredicted RBP20■□□□□ 0.79
TDP2-205ENST00000480495 RTF1Q92541 710 aaKnown RBP20■□□□□ 0.79
TDP2-205ENST00000480495 MYH14Q7Z406 1995 aaKnown RBP19.99■□□□□ 0.79
TDP2-205ENST00000480495 NEFMP07197 916 aa19.99■□□□□ 0.79
TDP2-205ENST00000480495 MMP10P09238 476 aa19.99■□□□□ 0.79
TDP2-205ENST00000480495 GYS1P13807 737 aa19.99■□□□□ 0.79
TDP2-205ENST00000480495 ZNF790Q6PG37 636 aa19.99■□□□□ 0.79
TDP2-205ENST00000480495 HTATSF1O43719 755 aaKnown RBP19.98■□□□□ 0.79
TDP2-205ENST00000480495 PELP1Q8IZL8 1130 aaKnown RBP19.97■□□□□ 0.79
TDP2-205ENST00000480495 TEX13AQ9BXU3 409 aaPredicted RBP19.97■□□□□ 0.79
TDP2-205ENST00000480495 PNNQ9H307 717 aaKnown RBP19.97■□□□□ 0.79
TDP2-205ENST00000480495 SOS1Q07889 1333 aaPredicted RBP19.97■□□□□ 0.79
TDP2-205ENST00000480495 STARD3NLO95772 234 aa19.96■□□□□ 0.79
TDP2-205ENST00000480495 ZEB1P37275 1124 aaPredicted RBP19.96■□□□□ 0.79
TDP2-205ENST00000480495 ZNF496Q96IT1 587 aaPredicted RBP19.96■□□□□ 0.79
TDP2-205ENST00000480495 USP42Q9H9J4 1324 aaKnown RBP19.96■□□□□ 0.79
TDP2-205ENST00000480495 UBR2Q8IWV8 1755 aa19.95■□□□□ 0.78
TDP2-205ENST00000480495 BTBD11A6QL63 1104 aa19.95■□□□□ 0.78
TDP2-205ENST00000480495 GRIN3BO60391 1043 aa19.95■□□□□ 0.78
TDP2-205ENST00000480495 FMNL2Q96PY5 1086 aa19.95■□□□□ 0.78
TDP2-205ENST00000480495 HEG1Q9ULI3 1381 aa19.95■□□□□ 0.78
TDP2-205ENST00000480495 SIPA1L3O60292 1781 aaPredicted RBP19.94■□□□□ 0.78
TDP2-205ENST00000480495 MCM10Q7L590 875 aa19.94■□□□□ 0.78
TDP2-205ENST00000480495 SRP68Q9UHB9 627 aaKnown RBP19.94■□□□□ 0.78
TDP2-205ENST00000480495 ZBTB1Q9Y2K1 713 aa19.94■□□□□ 0.78
TDP2-205ENST00000480495 PARP3Q9Y6F1 533 aa19.94■□□□□ 0.78
TDP2-205ENST00000480495 C4AP0C0L4 1744 aa19.93■□□□□ 0.78
TDP2-205ENST00000480495 ZPR1O75312 459 aa19.93■□□□□ 0.78
TDP2-205ENST00000480495 PLEKHF1Q96S99 279 aa19.93■□□□□ 0.78
TDP2-205ENST00000480495 MYBBP1AQ9BQG0 1328 aaKnown RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms