RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 PAPPAQ13219 1627 aa21.88■■□□□ 1.09
SCAMP3-207ENST00000480219 CT47B1P0C2W7 299 aaPredicted RBP21.88■■□□□ 1.09
SCAMP3-207ENST00000480219 TSR2Q969E8 191 aaKnown RBP21.88■■□□□ 1.09
SCAMP3-207ENST00000480219 SEPT12Q8IYM1 358 aa21.87■■□□□ 1.09
SCAMP3-207ENST00000480219 TSPYL4Q9UJ04 414 aa21.86■■□□□ 1.09
SCAMP3-207ENST00000480219 DOT1LQ8TEK3 1739 aa21.86■■□□□ 1.09
SCAMP3-207ENST00000480219 HEG1Q9ULI3 1381 aa21.85■■□□□ 1.09
SCAMP3-207ENST00000480219 ITGB4P16144 1822 aa21.85■■□□□ 1.09
SCAMP3-207ENST00000480219 SOS1Q07889 1333 aaPredicted RBP21.84■■□□□ 1.09
SCAMP3-207ENST00000480219 CABP4P57796 275 aa21.84■■□□□ 1.09
SCAMP3-207ENST00000480219 NFATC2IPQ8NCF5 419 aa21.84■■□□□ 1.09
SCAMP3-207ENST00000480219 LAS1LQ9Y4W2 734 aaKnown RBP21.84■■□□□ 1.09
SCAMP3-207ENST00000480219 BTBD11A6QL63 1104 aa21.83■■□□□ 1.09
SCAMP3-207ENST00000480219 RXRBP28702 533 aa21.83■■□□□ 1.09
SCAMP3-207ENST00000480219 EXOSC9Q06265 439 aaKnown RBP21.83■■□□□ 1.09
SCAMP3-207ENST00000480219 POTEAQ6S8J7 498 aa21.83■■□□□ 1.09
SCAMP3-207ENST00000480219 UBR2Q8IWV8 1755 aa21.82■■□□□ 1.08
SCAMP3-207ENST00000480219 ZNF428Q96B54 188 aa21.82■■□□□ 1.08
SCAMP3-207ENST00000480219 BRWD3Q6RI45 1802 aa21.82■■□□□ 1.08
SCAMP3-207ENST00000480219 MIS18AQ9NYP9 233 aa21.81■■□□□ 1.08
SCAMP3-207ENST00000480219 NHSQ6T4R5 1651 aa21.8■■□□□ 1.08
SCAMP3-207ENST00000480219 EIF4A1P60842 406 aaKnown RBP21.8■■□□□ 1.08
SCAMP3-207ENST00000480219 ZNF790Q6PG37 636 aa21.8■■□□□ 1.08
SCAMP3-207ENST00000480219 RGS12O14924 1447 aa21.8■■□□□ 1.08
SCAMP3-207ENST00000480219 A0A0G2JS52 829 aa21.79■■□□□ 1.08
SCAMP3-207ENST00000480219 HOXB7P09629 217 aa21.79■■□□□ 1.08
SCAMP3-207ENST00000480219 MYT1Q01538 1121 aa21.79■■□□□ 1.08
SCAMP3-207ENST00000480219 TMOD3Q9NYL9 352 aa21.79■■□□□ 1.08
SCAMP3-207ENST00000480219 KCPQ6ZWJ8 1503 aa21.79■■□□□ 1.08
SCAMP3-207ENST00000480219 C8orf58Q8NAV2 365 aa21.78■■□□□ 1.08
SCAMP3-207ENST00000480219 PIGBQ92521 554 aa21.78■■□□□ 1.08
SCAMP3-207ENST00000480219 VAMP4O75379 141 aa21.77■■□□□ 1.08
SCAMP3-207ENST00000480219 RCAN3Q9UKA8 241 aa21.77■■□□□ 1.08
SCAMP3-207ENST00000480219 RNF123Q5XPI4 1314 aa21.77■■□□□ 1.07
SCAMP3-207ENST00000480219 SBF2Q86WG5 1849 aa21.76■■□□□ 1.07
SCAMP3-207ENST00000480219 KCNQ3O43525 872 aa21.76■■□□□ 1.07
SCAMP3-207ENST00000480219 TWISTNBQ3B726 338 aaPredicted RBP21.76■■□□□ 1.07
SCAMP3-207ENST00000480219 KRT27Q7Z3Y8 459 aa21.76■■□□□ 1.07
SCAMP3-207ENST00000480219 TSPYL6Q8N831 410 aa21.76■■□□□ 1.07
SCAMP3-207ENST00000480219 PRIM1P49642 420 aaKnown RBP21.75■■□□□ 1.07
SCAMP3-207ENST00000480219 CICQ96RK0 1608 aaPredicted RBP21.74■■□□□ 1.07
SCAMP3-207ENST00000480219 RARSP54136 660 aaKnown RBP21.73■■□□□ 1.07
SCAMP3-207ENST00000480219 BRPF1P55201 1214 aaPredicted RBP21.73■■□□□ 1.07
SCAMP3-207ENST00000480219 SLC39A6Q13433 755 aa21.73■■□□□ 1.07
SCAMP3-207ENST00000480219 KRT24Q2M2I5 525 aa21.73■■□□□ 1.07
SCAMP3-207ENST00000480219 ALDH1L2Q3SY69 923 aa21.73■■□□□ 1.07
SCAMP3-207ENST00000480219 ATG3Q9NT62 314 aa21.73■■□□□ 1.07
SCAMP3-207ENST00000480219 GIGYF1O75420 1035 aaPredicted RBP21.72■■□□□ 1.07
SCAMP3-207ENST00000480219 FAM196AQ6ZSG2 479 aa21.72■■□□□ 1.07
SCAMP3-207ENST00000480219 TTC5Q8N0Z6 440 aa21.72■■□□□ 1.07
SCAMP3-207ENST00000480219 FMNL2Q96PY5 1086 aa21.72■■□□□ 1.07
SCAMP3-207ENST00000480219 ZNF831Q5JPB2 1677 aa21.72■■□□□ 1.07
SCAMP3-207ENST00000480219 ZNF496Q96IT1 587 aaPredicted RBP21.71■■□□□ 1.07
SCAMP3-207ENST00000480219 CHMP4AQ9BY43 222 aa21.71■■□□□ 1.07
SCAMP3-207ENST00000480219 VSIG10Q8N0Z9 540 aa21.7■■□□□ 1.06
SCAMP3-207ENST00000480219 ACSBG1Q96GR2 724 aa21.7■■□□□ 1.06
SCAMP3-207ENST00000480219 ASAP1Q9ULH1 1129 aa21.7■■□□□ 1.06
SCAMP3-207ENST00000480219 C5P01031 1676 aa21.69■■□□□ 1.06
SCAMP3-207ENST00000480219 LAMB4A4D0S4 1761 aa21.69■■□□□ 1.06
SCAMP3-207ENST00000480219 KCNQ2O43526 872 aa21.69■■□□□ 1.06
SCAMP3-207ENST00000480219 SSH1Q8WYL5 1049 aa21.68■■□□□ 1.06
SCAMP3-207ENST00000480219 BTAF1O14981 1849 aa21.68■■□□□ 1.06
SCAMP3-207ENST00000480219 ELL2O00472 640 aaPredicted RBP21.67■■□□□ 1.06
SCAMP3-207ENST00000480219 SNRPA1P09661 255 aaKnown RBP21.67■■□□□ 1.06
SCAMP3-207ENST00000480219 SMARCC1Q92922 1105 aaPredicted RBP21.67■■□□□ 1.06
SCAMP3-207ENST00000480219 SYTL4Q96C24 671 aaPredicted RBP21.67■■□□□ 1.06
SCAMP3-207ENST00000480219 BCL11BQ9C0K0 894 aaPredicted RBP21.67■■□□□ 1.06
SCAMP3-207ENST00000480219 FAM182BQ5T319 152 aa21.66■■□□□ 1.06
SCAMP3-207ENST00000480219 BCAR3O75815 825 aa21.64■■□□□ 1.05
SCAMP3-207ENST00000480219 CCDC30Q5VVM6 783 aa21.64■■□□□ 1.05
SCAMP3-207ENST00000480219 MRPL50Q8N5N7 158 aaKnown RBP21.64■■□□□ 1.05
SCAMP3-207ENST00000480219 SUPT16HQ9Y5B9 1047 aaKnown RBP21.64■■□□□ 1.05
SCAMP3-207ENST00000480219 CACNA1FO60840 1977 aa21.64■■□□□ 1.05
SCAMP3-207ENST00000480219 TJP1Q07157 1748 aa21.63■■□□□ 1.05
SCAMP3-207ENST00000480219 PALLDQ8WX93 1383 aa21.63■■□□□ 1.05
SCAMP3-207ENST00000480219 RRP1P56182 461 aaKnown RBP21.63■■□□□ 1.05
SCAMP3-207ENST00000480219 HDGFL1Q5TGJ6 251 aa21.63■■□□□ 1.05
SCAMP3-207ENST00000480219 SLC4A9Q96Q91 983 aa21.63■■□□□ 1.05
SCAMP3-207ENST00000480219 TEX13AQ9BXU3 409 aaPredicted RBP21.63■■□□□ 1.05
SCAMP3-207ENST00000480219 LY75O60449 1722 aa21.63■■□□□ 1.05
SCAMP3-207ENST00000480219 ERBB4Q15303 1308 aa21.62■■□□□ 1.05
SCAMP3-207ENST00000480219 PTF1AQ7RTS3 328 aa21.62■■□□□ 1.05
SCAMP3-207ENST00000480219 SMC4Q9NTJ3 1288 aa21.62■■□□□ 1.05
SCAMP3-207ENST00000480219 KIF16BQ96L93 1317 aa21.61■■□□□ 1.05
SCAMP3-207ENST00000480219 PRAMEF22A3QJZ6 481 aa21.61■■□□□ 1.05
SCAMP3-207ENST00000480219 PTCD1O75127 700 aaKnown RBP21.61■■□□□ 1.05
SCAMP3-207ENST00000480219 EP400Q96L91 3159 aa21.6■■□□□ 1.05
SCAMP3-207ENST00000480219 KAT6BQ8WYB5 2073 aa21.6■■□□□ 1.05
SCAMP3-207ENST00000480219 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.59■■□□□ 1.05
SCAMP3-207ENST00000480219 ARHGAP45Q92619 1136 aa21.59■■□□□ 1.05
SCAMP3-207ENST00000480219 USP16Q9Y5T5 823 aa21.59■■□□□ 1.05
SCAMP3-207ENST00000480219 RREB1Q92766 1687 aa21.59■■□□□ 1.05
SCAMP3-207ENST00000480219 LOC102724428A0A0B4J2F2 783 aa21.58■■□□□ 1.05
SCAMP3-207ENST00000480219 SIK1P57059 783 aa21.58■■□□□ 1.05
SCAMP3-207ENST00000480219 STK31Q9BXU1 1019 aa21.58■■□□□ 1.05
SCAMP3-207ENST00000480219 DBF4Q9UBU7 674 aaPredicted RBP21.58■■□□□ 1.05
SCAMP3-207ENST00000480219 COL5A3P25940 1745 aaPredicted RBP21.58■■□□□ 1.04
SCAMP3-207ENST00000480219 TNS1Q9HBL0 1735 aaKnown RBP21.58■■□□□ 1.04
SCAMP3-207ENST00000480219 PDIA6Q15084 440 aa21.57■■□□□ 1.04
SCAMP3-207ENST00000480219 LRP10Q7Z4F1 713 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms