RNA–Protein interactions for RNA: ENST00000480181.1

CLIC3-202, Transcript of chloride intracellular channel 3, humanhuman

TSL 3

Gene CLIC3, Length 794 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-202ENST00000480181 POLR3GLQ9BT43 218 aa28.48■■■□□ 2.15
CLIC3-202ENST00000480181 ATG3Q9NT62 314 aa28.47■■■□□ 2.15
CLIC3-202ENST00000480181 ITPK1Q13572 414 aa28.45■■■□□ 2.14
CLIC3-202ENST00000480181 DCAF5Q96JK2 942 aa28.45■■■□□ 2.14
CLIC3-202ENST00000480181 RTCBQ9Y3I0 505 aaKnown RBP28.45■■■□□ 2.14
CLIC3-202ENST00000480181 TNNT2P45379 298 aaPredicted RBP28.44■■■□□ 2.14
CLIC3-202ENST00000480181 PLEKHO1Q53GL0 409 aaPredicted RBP28.44■■■□□ 2.14
CLIC3-202ENST00000480181 TRAPPC3LQ5T215 181 aa28.44■■■□□ 2.14
CLIC3-202ENST00000480181 ADCY9O60503 1353 aa28.43■■■□□ 2.14
CLIC3-202ENST00000480181 ADRA2BP18089 450 aa28.43■■■□□ 2.14
CLIC3-202ENST00000480181 AMOTQ4VCS5 1084 aa28.43■■■□□ 2.14
CLIC3-202ENST00000480181 RC3H1Q5TC82 1133 aaKnown RBP28.42■■■□□ 2.14
CLIC3-202ENST00000480181 NLGN1Q8N2Q7 840 aa28.42■■■□□ 2.14
CLIC3-202ENST00000480181 SMIM5Q71RC9 77 aa28.41■■■□□ 2.14
CLIC3-202ENST00000480181 MMP10P09238 476 aa28.4■■■□□ 2.14
CLIC3-202ENST00000480181 TGFB2P61812 414 aa28.4■■■□□ 2.14
CLIC3-202ENST00000480181 EIF4G2P78344 907 aaKnown RBP eCLIP28.4■■■□□ 2.14
CLIC3-202ENST00000480181 ZNF831Q5JPB2 1677 aa28.39■■■□□ 2.14
CLIC3-202ENST00000480181 RBM42Q9BTD8 480 aaKnown RBP28.38■■■□□ 2.13
CLIC3-202ENST00000480181 KDRP35968 1356 aa28.37■■■□□ 2.13
CLIC3-202ENST00000480181 CABP4P57796 275 aa28.36■■■□□ 2.13
CLIC3-202ENST00000480181 PANK3Q9H999 370 aa28.36■■■□□ 2.13
CLIC3-202ENST00000480181 CNTNAP4Q9C0A0 1308 aa28.36■■■□□ 2.13
CLIC3-202ENST00000480181 CEP350Q5VT06 3117 aa28.35■■■□□ 2.13
CLIC3-202ENST00000480181 C1orf141Q5JVX7 400 aa28.35■■■□□ 2.13
CLIC3-202ENST00000480181 ZNF530Q6P9A1 599 aaPredicted RBP28.35■■■□□ 2.13
CLIC3-202ENST00000480181 RFC4P35249 363 aa28.34■■■□□ 2.13
CLIC3-202ENST00000480181 ZNF526Q8TF50 670 aaPredicted RBP28.34■■■□□ 2.13
CLIC3-202ENST00000480181 CCDC87Q9NVE4 849 aa28.34■■■□□ 2.13
CLIC3-202ENST00000480181 RPS6KA4O75676 772 aa28.33■■■□□ 2.13
CLIC3-202ENST00000480181 WWC3Q9ULE0 1092 aa28.33■■■□□ 2.13
CLIC3-202ENST00000480181 MTHFSP49914 203 aa28.32■■■□□ 2.12
CLIC3-202ENST00000480181 MORC1Q86VD1 984 aa28.32■■■□□ 2.12
CLIC3-202ENST00000480181 ARHGEF1Q92888 912 aaKnown RBP28.32■■■□□ 2.12
CLIC3-202ENST00000480181 HSPA6P17066 643 aa28.31■■■□□ 2.12
CLIC3-202ENST00000480181 PARP3Q9Y6F1 533 aa28.31■■■□□ 2.12
CLIC3-202ENST00000480181 KIF13BQ9NQT8 1826 aa28.3■■■□□ 2.12
CLIC3-202ENST00000480181 CICQ96RK0 1608 aaPredicted RBP28.3■■■□□ 2.12
CLIC3-202ENST00000480181 SLC4A9Q96Q91 983 aa28.3■■■□□ 2.12
CLIC3-202ENST00000480181 PXDNLA1KZ92 1463 aa28.29■■■□□ 2.12
CLIC3-202ENST00000480181 HSPA5P11021 654 aaKnown RBP28.29■■■□□ 2.12
CLIC3-202ENST00000480181 BCS1LQ9Y276 419 aa28.28■■■□□ 2.12
CLIC3-202ENST00000480181 C10orf71Q711Q0 1435 aa28.27■■■□□ 2.12
CLIC3-202ENST00000480181 GYS1P13807 737 aa28.27■■■□□ 2.12
CLIC3-202ENST00000480181 KDM6AO15550 1401 aaPredicted RBP28.26■■■□□ 2.12
CLIC3-202ENST00000480181 COL5A3P25940 1745 aaPredicted RBP28.26■■■□□ 2.12
CLIC3-202ENST00000480181 KNSTRNQ9Y448 316 aa28.26■■■□□ 2.11
CLIC3-202ENST00000480181 A0A0G2JLW4 131 aa28.25■■■□□ 2.11
CLIC3-202ENST00000480181 C4AP0C0L4 1744 aa28.23■■■□□ 2.11
CLIC3-202ENST00000480181 PTCD1O75127 700 aaKnown RBP28.23■■■□□ 2.11
CLIC3-202ENST00000480181 SULT6B1Q6IMI4 303 aa28.23■■■□□ 2.11
CLIC3-202ENST00000480181 NFATC2IPQ8NCF5 419 aa28.23■■■□□ 2.11
CLIC3-202ENST00000480181 ARHGAP27Q6ZUM4 889 aa28.22■■■□□ 2.11
CLIC3-202ENST00000480181 KIF3CO14782 793 aa28.21■■■□□ 2.11
CLIC3-202ENST00000480181 FCHSD2O94868 740 aa28.21■■■□□ 2.11
CLIC3-202ENST00000480181 AEBP1Q8IUX7 1158 aa28.21■■■□□ 2.11
CLIC3-202ENST00000480181 N4BP2Q86UW6 1770 aaPredicted RBP28.2■■■□□ 2.11
CLIC3-202ENST00000480181 DPEP1P16444 411 aa28.2■■■□□ 2.1
CLIC3-202ENST00000480181 CRKLP46109 303 aaKnown RBP28.2■■■□□ 2.1
CLIC3-202ENST00000480181 KIAA1551Q9HCM1 1747 aa28.19■■■□□ 2.1
CLIC3-202ENST00000480181 IFFO2Q5TF58 517 aa28.19■■■□□ 2.1
CLIC3-202ENST00000480181 AKAP4Q5JQC9 854 aa28.18■■■□□ 2.1
CLIC3-202ENST00000480181 PIM2Q9P1W9 311 aa28.18■■■□□ 2.1
CLIC3-202ENST00000480181 IL13P35225 146 aa28.17■■■□□ 2.1
CLIC3-202ENST00000480181 MYH14Q7Z406 1995 aaKnown RBP28.17■■■□□ 2.1
CLIC3-202ENST00000480181 USP42Q9H9J4 1324 aaKnown RBP28.17■■■□□ 2.1
CLIC3-202ENST00000480181 TOMM70O94826 608 aa28.16■■■□□ 2.1
CLIC3-202ENST00000480181 APLP1P51693 650 aa28.14■■■□□ 2.1
CLIC3-202ENST00000480181 ZPR1O75312 459 aa28.13■■■□□ 2.09
CLIC3-202ENST00000480181 DALRD3Q5D0E6 543 aaKnown RBP28.13■■■□□ 2.09
CLIC3-202ENST00000480181 KCNA3P22001 575 aa28.12■■■□□ 2.09
CLIC3-202ENST00000480181 SLC52A2Q9HAB3 445 aa28.12■■■□□ 2.09
CLIC3-202ENST00000480181 SCN11AQ9UI33 1791 aa28.11■■■□□ 2.09
CLIC3-202ENST00000480181 FKBP8Q14318 412 aa28.11■■■□□ 2.09
CLIC3-202ENST00000480181 SRP68Q9UHB9 627 aaKnown RBP28.11■■■□□ 2.09
CLIC3-202ENST00000480181 BRCA1P38398 1863 aaKnown RBP28.1■■■□□ 2.09
CLIC3-202ENST00000480181 INTS5Q6P9B9 1019 aaKnown RBP28.1■■■□□ 2.09
CLIC3-202ENST00000480181 ARFGEF1Q9Y6D6 1849 aa28.09■■■□□ 2.09
CLIC3-202ENST00000480181 AMER1Q5JTC6 1135 aaPredicted RBP28.08■■■□□ 2.09
CLIC3-202ENST00000480181 C9orf131Q5VYM1 1079 aa28.08■■■□□ 2.09
CLIC3-202ENST00000480181 C16orf71Q8IYS4 520 aaPredicted RBP28.08■■■□□ 2.09
CLIC3-202ENST00000480181 TJP1Q07157 1748 aa28.08■■■□□ 2.09
CLIC3-202ENST00000480181 TM4SF1P30408 202 aa28.07■■■□□ 2.08
CLIC3-202ENST00000480181 DDR1Q08345 913 aa28.07■■■□□ 2.08
CLIC3-202ENST00000480181 DNAJC10Q8IXB1 793 aa28.06■■■□□ 2.08
CLIC3-202ENST00000480181 KDM2BQ8NHM5 1336 aa28.06■■■□□ 2.08
CLIC3-202ENST00000480181 POLRMTO00411 1230 aaKnown RBP28.05■■■□□ 2.08
CLIC3-202ENST00000480181 RNMTO43148 476 aaKnown RBP28.05■■■□□ 2.08
CLIC3-202ENST00000480181 SOS1Q07889 1333 aaPredicted RBP28.05■■■□□ 2.08
CLIC3-202ENST00000480181 VSIG10Q8N0Z9 540 aa28.05■■■□□ 2.08
CLIC3-202ENST00000480181 USPL1Q5W0Q7 1092 aa28.04■■■□□ 2.08
CLIC3-202ENST00000480181 RBM46Q8TBY0 533 aaKnown RBP28.04■■■□□ 2.08
CLIC3-202ENST00000480181 LGR6Q9HBX8 967 aa28.04■■■□□ 2.08
CLIC3-202ENST00000480181 MRC1P22897 1456 aa28.03■■■□□ 2.08
CLIC3-202ENST00000480181 CYP19A1P11511 503 aaPredicted RBP28.03■■■□□ 2.08
CLIC3-202ENST00000480181 NMRK2Q9NPI5 230 aa28.03■■■□□ 2.08
CLIC3-202ENST00000480181 NARFQ9UHQ1 456 aa28.03■■■□□ 2.08
CLIC3-202ENST00000480181 DIAPH1O60610 1272 aaKnown RBP28.01■■■□□ 2.07
CLIC3-202ENST00000480181 HMOX1P09601 288 aa28■■■□□ 2.07
CLIC3-202ENST00000480181 RNF181Q9P0P0 153 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms