RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 AKAP2Q9Y2D5 859 aa7.16□□□□□ -1.26
PRPF4B-205ENST00000480058 KIAA0586Q9BVV6 1533 aa7.16□□□□□ -1.26
PRPF4B-205ENST00000480058 PSME1Q06323 249 aa7.16□□□□□ -1.26
PRPF4B-205ENST00000480058 GABPB1Q06547 395 aaPredicted RBP7.16□□□□□ -1.26
PRPF4B-205ENST00000480058 SPA17Q15506 151 aa7.16□□□□□ -1.26
PRPF4B-205ENST00000480058 KIF4BQ2VIQ3 1234 aa7.16□□□□□ -1.26
PRPF4B-205ENST00000480058 CCDC102AQ96A19 550 aa7.16□□□□□ -1.26
PRPF4B-205ENST00000480058 USP25Q9UHP3 1055 aa7.16□□□□□ -1.26
PRPF4B-205ENST00000480058 RALGAPBQ86X10 1494 aa7.16□□□□□ -1.26
PRPF4B-205ENST00000480058 PPP1R12BO60237 982 aaPredicted RBP7.16□□□□□ -1.26
PRPF4B-205ENST00000480058 YEATS4O95619 227 aa7.16□□□□□ -1.26
PRPF4B-205ENST00000480058 VPS53Q5VIR6 699 aa7.16□□□□□ -1.26
PRPF4B-205ENST00000480058 TRIM34Q9BYJ4 488 aa7.16□□□□□ -1.26
PRPF4B-205ENST00000480058 RNF41Q9H4P4 317 aaPredicted RBP7.16□□□□□ -1.26
PRPF4B-205ENST00000480058 GIMAP7Q8NHV1 300 aa7.16□□□□□ -1.26
PRPF4B-205ENST00000480058 ARFGAP3Q9NP61 516 aa7.16□□□□□ -1.26
PRPF4B-205ENST00000480058 STX6O43752 255 aa7.16□□□□□ -1.26
PRPF4B-205ENST00000480058 SPC24Q8NBT2 197 aa7.16□□□□□ -1.26
PRPF4B-205ENST00000480058 SULT6B1Q6IMI4 303 aa7.16□□□□□ -1.26
PRPF4B-205ENST00000480058 ANKRD24Q8TF21 1146 aa7.16□□□□□ -1.26
PRPF4B-205ENST00000480058 SLC26A8Q96RN1 970 aa7.16□□□□□ -1.26
PRPF4B-205ENST00000480058 SMAP1Q8IYB5 467 aaPredicted RBP7.15□□□□□ -1.26
PRPF4B-205ENST00000480058 LRRC27Q9C0I9 530 aa7.15□□□□□ -1.26
PRPF4B-205ENST00000480058 CLIP2Q9UDT6 1046 aa7.15□□□□□ -1.26
PRPF4B-205ENST00000480058 CKAP4Q07065 602 aaKnown RBP7.15□□□□□ -1.26
PRPF4B-205ENST00000480058 AMOTQ4VCS5 1084 aa7.15□□□□□ -1.26
PRPF4B-205ENST00000480058 FKBP15Q5T1M5 1219 aa7.15□□□□□ -1.26
PRPF4B-205ENST00000480058 TSR2Q969E8 191 aaKnown RBP7.15□□□□□ -1.26
PRPF4B-205ENST00000480058 DNAJC2Q99543 621 aaKnown RBP7.15□□□□□ -1.26
PRPF4B-205ENST00000480058 RNF123Q5XPI4 1314 aa7.15□□□□□ -1.26
PRPF4B-205ENST00000480058 POLR3AO14802 1390 aaPredicted RBP7.15□□□□□ -1.26
PRPF4B-205ENST00000480058 URI1O94763 535 aaPredicted RBP7.15□□□□□ -1.26
PRPF4B-205ENST00000480058 NOLC1Q14978 699 aaKnown RBP eCLIP7.15□□□□□ -1.26
PRPF4B-205ENST00000480058 SOGA3Q5TF21 947 aa7.15□□□□□ -1.26
PRPF4B-205ENST00000480058 KCNH5Q8NCM2 988 aa7.15□□□□□ -1.26
PRPF4B-205ENST00000480058 RBM27Q9P2N5 1060 aaKnown RBP7.15□□□□□ -1.26
PRPF4B-205ENST00000480058 EIF5P55010 431 aaKnown RBP7.15□□□□□ -1.27
PRPF4B-205ENST00000480058 SPECC1LQ69YQ0 1117 aa7.15□□□□□ -1.27
PRPF4B-205ENST00000480058 TTC21BQ7Z4L5 1316 aa7.15□□□□□ -1.27
PRPF4B-205ENST00000480058 SLU7O95391 586 aaKnown RBP7.15□□□□□ -1.27
PRPF4B-205ENST00000480058 TAOK3Q9H2K8 898 aa7.15□□□□□ -1.27
PRPF4B-205ENST00000480058 TATP17735 454 aaPredicted RBP7.14□□□□□ -1.27
PRPF4B-205ENST00000480058 EVI5LQ96CN4 794 aa7.14□□□□□ -1.27
PRPF4B-205ENST00000480058 CTAGE1Q96RT6 745 aa7.14□□□□□ -1.27
PRPF4B-205ENST00000480058 UBAC1Q9BSL1 405 aa7.14□□□□□ -1.27
PRPF4B-205ENST00000480058 CCDC184Q52MB2 194 aa7.14□□□□□ -1.27
PRPF4B-205ENST00000480058 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.14□□□□□ -1.27
PRPF4B-205ENST00000480058 CTDP1Q9Y5B0 961 aaPredicted RBP7.14□□□□□ -1.27
PRPF4B-205ENST00000480058 RAD50Q92878 1312 aa7.14□□□□□ -1.27
PRPF4B-205ENST00000480058 FMNL3Q8IVF7 1028 aa7.14□□□□□ -1.27
PRPF4B-205ENST00000480058 KCNG4Q8TDN1 519 aa7.14□□□□□ -1.27
PRPF4B-205ENST00000480058 CABP2Q9NPB3 220 aa7.14□□□□□ -1.27
PRPF4B-205ENST00000480058 ZFYP08048 801 aaPredicted RBP7.14□□□□□ -1.27
PRPF4B-205ENST00000480058 CCDC102BQ68D86 513 aa7.14□□□□□ -1.27
PRPF4B-205ENST00000480058 C8orf76Q96K31 380 aa7.14□□□□□ -1.27
PRPF4B-205ENST00000480058 MYO1BO43795 1136 aa7.14□□□□□ -1.27
PRPF4B-205ENST00000480058 DESP17661 470 aa7.14□□□□□ -1.27
PRPF4B-205ENST00000480058 TRAF1Q13077 416 aa7.14□□□□□ -1.27
PRPF4B-205ENST00000480058 FAM114A1Q8IWE2 563 aa7.14□□□□□ -1.27
PRPF4B-205ENST00000480058 THEMISQ8N1K5 641 aaPredicted RBP7.14□□□□□ -1.27
PRPF4B-205ENST00000480058 ANKRD36BQ8N2N9 1353 aa7.14□□□□□ -1.27
PRPF4B-205ENST00000480058 TRIM27P14373 513 aa7.13□□□□□ -1.27
PRPF4B-205ENST00000480058 ANKRD44Q8N8A2 993 aa7.13□□□□□ -1.27
PRPF4B-205ENST00000480058 PARD3Q8TEW0 1356 aa7.13□□□□□ -1.27
PRPF4B-205ENST00000480058 SNW1Q13573 536 aaKnown RBP7.13□□□□□ -1.27
PRPF4B-205ENST00000480058 RAB3GAP1Q15042 981 aa7.13□□□□□ -1.27
PRPF4B-205ENST00000480058 NLRP2Q9NX02 1062 aa7.13□□□□□ -1.27
PRPF4B-205ENST00000480058 RTEL1-TNFRSF6BF6WH68 1400 aa7.13□□□□□ -1.27
PRPF4B-205ENST00000480058 CCDC69A6NI79 296 aa7.13□□□□□ -1.27
PRPF4B-205ENST00000480058 SSFA2P28290 1259 aa7.13□□□□□ -1.27
PRPF4B-205ENST00000480058 GBP2P32456 591 aaPredicted RBP7.13□□□□□ -1.27
PRPF4B-205ENST00000480058 IFI16Q16666 785 aaKnown RBP7.13□□□□□ -1.27
PRPF4B-205ENST00000480058 ZNF530Q6P9A1 599 aaPredicted RBP7.13□□□□□ -1.27
PRPF4B-205ENST00000480058 TMTC2Q8N394 836 aa7.13□□□□□ -1.27
PRPF4B-205ENST00000480058 CCDC94Q9BW85 323 aaPredicted RBP7.13□□□□□ -1.27
PRPF4B-205ENST00000480058 PLVAPQ9BX97 442 aa7.13□□□□□ -1.27
PRPF4B-205ENST00000480058 WDR97A6NE52 1622 aa7.13□□□□□ -1.27
PRPF4B-205ENST00000480058 CCDC175P0C221 793 aa7.13□□□□□ -1.27
PRPF4B-205ENST00000480058 PPP1R2P41236 205 aa7.13□□□□□ -1.27
PRPF4B-205ENST00000480058 GIGYF2Q6Y7W6 1299 aaKnown RBP7.13□□□□□ -1.27
PRPF4B-205ENST00000480058 BBXQ8WY36 941 aaPredicted RBP7.13□□□□□ -1.27
PRPF4B-205ENST00000480058 ALS2CR12Q96Q35 445 aa7.13□□□□□ -1.27
PRPF4B-205ENST00000480058 DBF4Q9UBU7 674 aaPredicted RBP7.13□□□□□ -1.27
PRPF4B-205ENST00000480058 SPG7Q9UQ90 795 aa7.13□□□□□ -1.27
PRPF4B-205ENST00000480058 SCAF11Q99590 1463 aaKnown RBP7.13□□□□□ -1.27
PRPF4B-205ENST00000480058 ADCY5O95622 1261 aa7.13□□□□□ -1.27
PRPF4B-205ENST00000480058 POTEJP0CG39 1038 aa7.13□□□□□ -1.27
PRPF4B-205ENST00000480058 CROCCP2Q86T23 111 aa7.13□□□□□ -1.27
PRPF4B-205ENST00000480058 AACSQ86V21 672 aa7.13□□□□□ -1.27
PRPF4B-205ENST00000480058 AFAP1Q8N556 730 aa7.13□□□□□ -1.27
PRPF4B-205ENST00000480058 ZMYND15Q9H091 742 aa7.13□□□□□ -1.27
PRPF4B-205ENST00000480058 ALDH1L1O75891 902 aa7.12□□□□□ -1.27
PRPF4B-205ENST00000480058 XPCQ01831 940 aaPredicted RBP7.12□□□□□ -1.27
PRPF4B-205ENST00000480058 SEPT7Q16181 437 aaKnown RBP7.12□□□□□ -1.27
PRPF4B-205ENST00000480058 OSCARQ8IYS5 282 aa7.12□□□□□ -1.27
PRPF4B-205ENST00000480058 GCOM1H8Y6P7 765 aaPredicted RBP7.12□□□□□ -1.27
PRPF4B-205ENST00000480058 MYZAPP0CAP1 466 aa7.12□□□□□ -1.27
PRPF4B-205ENST00000480058 NUCB1Q02818 461 aa7.12□□□□□ -1.27
PRPF4B-205ENST00000480058 TTC22Q5TAA0 569 aa7.12□□□□□ -1.27
PRPF4B-205ENST00000480058 KIAA1328Q86T90 577 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms