RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 TCERG1O14776 1098 aaKnown RBP14□□□□□ -0.17
VTI1A-204ENST00000480057 PHKG2P15735 406 aa14□□□□□ -0.17
VTI1A-204ENST00000480057 TMEM57Q8N5G2 664 aa14□□□□□ -0.17
VTI1A-204ENST00000480057 LGR6Q9HBX8 967 aa14□□□□□ -0.17
VTI1A-204ENST00000480057 TSHZ2Q9NRE2 1034 aa14□□□□□ -0.17
VTI1A-204ENST00000480057 MIS18AQ9NYP9 233 aa14□□□□□ -0.17
VTI1A-204ENST00000480057 KRT24Q2M2I5 525 aa13.99□□□□□ -0.17
VTI1A-204ENST00000480057 ITPRIPQ8IWB1 547 aa13.99□□□□□ -0.17
VTI1A-204ENST00000480057 STK31Q9BXU1 1019 aa13.99□□□□□ -0.17
VTI1A-204ENST00000480057 BTBD11A6QL63 1104 aa13.98□□□□□ -0.17
VTI1A-204ENST00000480057 EIF4A1P60842 406 aaKnown RBP13.98□□□□□ -0.17
VTI1A-204ENST00000480057 MPRIPQ6WCQ1 1025 aa13.98□□□□□ -0.17
VTI1A-204ENST00000480057 TOM1L2Q6ZVM7 507 aa13.98□□□□□ -0.17
VTI1A-204ENST00000480057 DCAF5Q96JK2 942 aa13.98□□□□□ -0.17
VTI1A-204ENST00000480057 RWDD1Q9H446 243 aaPredicted RBP13.98□□□□□ -0.17
VTI1A-204ENST00000480057 ZBTB40Q9NUA8 1239 aa13.98□□□□□ -0.17
VTI1A-204ENST00000480057 RGS12O14924 1447 aa13.98□□□□□ -0.17
VTI1A-204ENST00000480057 KDM6AO15550 1401 aaPredicted RBP13.98□□□□□ -0.17
VTI1A-204ENST00000480057 HEG1Q9ULI3 1381 aa13.97□□□□□ -0.17
VTI1A-204ENST00000480057 PCDH11XQ9BZA7 1347 aa13.97□□□□□ -0.17
VTI1A-204ENST00000480057 PCDH11YQ9BZA8 1340 aa13.97□□□□□ -0.17
VTI1A-204ENST00000480057 HDAC1Q13547 482 aaPredicted RBP13.97□□□□□ -0.17
VTI1A-204ENST00000480057 INTS3Q68E01 1043 aaKnown RBP13.97□□□□□ -0.17
VTI1A-204ENST00000480057 PLCH1Q4KWH8 1693 aa13.97□□□□□ -0.17
VTI1A-204ENST00000480057 SLC4A2P04920 1241 aa13.96□□□□□ -0.17
VTI1A-204ENST00000480057 IL2RBP14784 551 aa13.96□□□□□ -0.17
VTI1A-204ENST00000480057 EVA1CP58658 441 aa13.96□□□□□ -0.17
VTI1A-204ENST00000480057 SLC52A2Q9HAB3 445 aa13.96□□□□□ -0.17
VTI1A-204ENST00000480057 PCDHB15Q9Y5E8 787 aa13.96□□□□□ -0.17
VTI1A-204ENST00000480057 PXDNLA1KZ92 1463 aa13.95□□□□□ -0.18
VTI1A-204ENST00000480057 ZBTB7BO15156 539 aaPredicted RBP13.95□□□□□ -0.18
VTI1A-204ENST00000480057 NKX1-1Q15270 411 aaPredicted RBP13.95□□□□□ -0.18
VTI1A-204ENST00000480057 ZCRB1Q8TBF4 217 aaKnown RBP13.95□□□□□ -0.18
VTI1A-204ENST00000480057 N4BP2Q86UW6 1770 aaPredicted RBP13.95□□□□□ -0.18
VTI1A-204ENST00000480057 CYP27B1O15528 508 aa13.94□□□□□ -0.18
VTI1A-204ENST00000480057 IGHDP01880 384 aa13.94□□□□□ -0.18
VTI1A-204ENST00000480057 SHANK3Q9BYB0 1731 aa13.93□□□□□ -0.18
VTI1A-204ENST00000480057 CCT4P50991 539 aaKnown RBP13.93□□□□□ -0.18
VTI1A-204ENST00000480057 HDGFL1Q5TGJ6 251 aa13.93□□□□□ -0.18
VTI1A-204ENST00000480057 LARP1Q6PKG0 1096 aaKnown RBP13.93□□□□□ -0.18
VTI1A-204ENST00000480057 DISP2A7MBM2 1401 aa13.92□□□□□ -0.18
VTI1A-204ENST00000480057 BTG4Q9NY30 223 aa13.92□□□□□ -0.18
VTI1A-204ENST00000480057 NWD2Q9ULI1 1742 aa13.92□□□□□ -0.18
VTI1A-204ENST00000480057 NRAPQ86VF7 1730 aa13.91□□□□□ -0.18
VTI1A-204ENST00000480057 ERVV-2B6SEH9 535 aa13.91□□□□□ -0.18
VTI1A-204ENST00000480057 GIGYF1O75420 1035 aaPredicted RBP13.91□□□□□ -0.18
VTI1A-204ENST00000480057 FLIIQ13045 1269 aa13.91□□□□□ -0.18
VTI1A-204ENST00000480057 STRN4Q9NRL3 753 aa13.91□□□□□ -0.18
VTI1A-204ENST00000480057 WNK3Q9BYP7 1800 aa13.91□□□□□ -0.18
VTI1A-204ENST00000480057 ZNF790Q6PG37 636 aa13.9□□□□□ -0.18
VTI1A-204ENST00000480057 CDCA7Q9BWT1 371 aaPredicted RBP13.9□□□□□ -0.18
VTI1A-204ENST00000480057 KCNQ3O43525 872 aa13.89□□□□□ -0.19
VTI1A-204ENST00000480057 G2E3Q7L622 706 aa13.89□□□□□ -0.19
VTI1A-204ENST00000480057 SMC5Q8IY18 1101 aa13.89□□□□□ -0.19
VTI1A-204ENST00000480057 DBF4Q9UBU7 674 aaPredicted RBP13.89□□□□□ -0.19
VTI1A-204ENST00000480057 THRAP3Q9Y2W1 955 aaKnown RBP13.89□□□□□ -0.19
VTI1A-204ENST00000480057 LRP6O75581 1613 aa13.89□□□□□ -0.19
VTI1A-204ENST00000480057 PAPPAQ13219 1627 aa13.89□□□□□ -0.19
VTI1A-204ENST00000480057 UBAP1LF5GYI3 381 aa13.88□□□□□ -0.19
VTI1A-204ENST00000480057 CABP4P57796 275 aa13.88□□□□□ -0.19
VTI1A-204ENST00000480057 NFATC2IPQ8NCF5 419 aa13.88□□□□□ -0.19
VTI1A-204ENST00000480057 IBTKQ9P2D0 1353 aaPredicted RBP13.87□□□□□ -0.19
VTI1A-204ENST00000480057 LAMB4A4D0S4 1761 aa13.87□□□□□ -0.19
VTI1A-204ENST00000480057 UBR2Q8IWV8 1755 aa13.87□□□□□ -0.19
VTI1A-204ENST00000480057 FKBP5Q13451 457 aaPredicted RBP13.87□□□□□ -0.19
VTI1A-204ENST00000480057 RPAP2Q8IXW5 612 aaPredicted RBP13.87□□□□□ -0.19
VTI1A-204ENST00000480057 TTC5Q8N0Z6 440 aa13.87□□□□□ -0.19
VTI1A-204ENST00000480057 JCADQ9P266 1359 aa13.86□□□□□ -0.19
VTI1A-204ENST00000480057 SLIT2O94813 1529 aa13.86□□□□□ -0.19
VTI1A-204ENST00000480057 PIP4K2BP78356 416 aa13.86□□□□□ -0.19
VTI1A-204ENST00000480057 GCC1Q96CN9 775 aa13.86□□□□□ -0.19
VTI1A-204ENST00000480057 FMNL2Q96PY5 1086 aa13.86□□□□□ -0.19
VTI1A-204ENST00000480057 HYPKQ9NX55 129 aa13.86□□□□□ -0.19
VTI1A-204ENST00000480057 RBM19Q9Y4C8 960 aaKnown RBP13.86□□□□□ -0.19
VTI1A-204ENST00000480057 ATP10DQ9P241 1426 aa13.86□□□□□ -0.19
VTI1A-204ENST00000480057 C5P01031 1676 aa13.85□□□□□ -0.19
VTI1A-204ENST00000480057 TNS2Q63HR2 1409 aa13.85□□□□□ -0.19
VTI1A-204ENST00000480057 SNRPA1P09661 255 aaKnown RBP13.85□□□□□ -0.19
VTI1A-204ENST00000480057 EIF2S2P20042 333 aaKnown RBP13.85□□□□□ -0.19
VTI1A-204ENST00000480057 DDX21Q9NR30 783 aaKnown RBP eCLIP13.85□□□□□ -0.19
VTI1A-204ENST00000480057 CHPF2Q9P2E5 772 aa13.85□□□□□ -0.19
VTI1A-204ENST00000480057 ERBB4Q15303 1308 aa13.85□□□□□ -0.19
VTI1A-204ENST00000480057 GLI3P10071 1580 aa13.84□□□□□ -0.19
VTI1A-204ENST00000480057 GNAI3P08754 354 aa13.84□□□□□ -0.19
VTI1A-204ENST00000480057 ANKRD44Q8N8A2 993 aa13.84□□□□□ -0.19
VTI1A-204ENST00000480057 PDZRN3Q9UPQ7 1066 aa13.84□□□□□ -0.19
VTI1A-204ENST00000480057 CERKQ8TCT0 537 aa13.83□□□□□ -0.2
VTI1A-204ENST00000480057 NECTIN2Q92692 538 aa13.83□□□□□ -0.2
VTI1A-204ENST00000480057 TOGARAM1Q9Y4F4 1720 aa13.83□□□□□ -0.2
VTI1A-204ENST00000480057 SPATA31A1Q5TZJ5 1347 aa13.83□□□□□ -0.2
VTI1A-204ENST00000480057 SPATA31A6Q5VVP1 1343 aa13.83□□□□□ -0.2
VTI1A-204ENST00000480057 KCPQ6ZWJ8 1503 aa13.82□□□□□ -0.2
VTI1A-204ENST00000480057 F6X3S4 739 aa13.82□□□□□ -0.2
VTI1A-204ENST00000480057 DDX58O95786 925 aaKnown RBP13.82□□□□□ -0.2
VTI1A-204ENST00000480057 SLC39A6Q13433 755 aa13.82□□□□□ -0.2
VTI1A-204ENST00000480057 ZNF496Q96IT1 587 aaPredicted RBP13.82□□□□□ -0.2
VTI1A-204ENST00000480057 BACH2Q9BYV9 841 aa13.82□□□□□ -0.2
VTI1A-204ENST00000480057 PHAXQ9H814 394 aaKnown RBP13.82□□□□□ -0.2
VTI1A-204ENST00000480057 EXOC5O00471 708 aa13.81□□□□□ -0.2
VTI1A-204ENST00000480057 GNAI2P04899 355 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms