RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 GAS2L1Q99501 681 aaPredicted RBP10.89□□□□□ -0.67
COMMD3-212ENST00000479958 PCDHGA11Q9Y5H2 935 aa10.89□□□□□ -0.67
COMMD3-212ENST00000479958 BACH1O14867 736 aa10.88□□□□□ -0.67
COMMD3-212ENST00000479958 GTF2IP78347 998 aa10.88□□□□□ -0.67
COMMD3-212ENST00000479958 FOXR1Q6PIV2 292 aa10.88□□□□□ -0.67
COMMD3-212ENST00000479958 TBC1D9Q6ZT07 1266 aa10.88□□□□□ -0.67
COMMD3-212ENST00000479958 PLEKHM2Q8IWE5 1019 aa10.88□□□□□ -0.67
COMMD3-212ENST00000479958 ATP1A2P50993 1020 aa10.87□□□□□ -0.67
COMMD3-212ENST00000479958 SCNN1DP51172 638 aa10.87□□□□□ -0.67
COMMD3-212ENST00000479958 PPARGC1BQ86YN6 1023 aaKnown RBP10.87□□□□□ -0.67
COMMD3-212ENST00000479958 FHDC1Q9C0D6 1143 aaPredicted RBP10.87□□□□□ -0.67
COMMD3-212ENST00000479958 SMTNP53814 917 aa10.86□□□□□ -0.67
COMMD3-212ENST00000479958 RHBDD1Q8TEB9 315 aa10.86□□□□□ -0.67
COMMD3-212ENST00000479958 USP17L3A6NCW0 530 aa10.85□□□□□ -0.67
COMMD3-212ENST00000479958 USP17L4A6NCW7 530 aa10.85□□□□□ -0.67
COMMD3-212ENST00000479958 STAU1O95793 577 aaKnown RBP10.85□□□□□ -0.67
COMMD3-212ENST00000479958 F11P03951 625 aa10.85□□□□□ -0.67
COMMD3-212ENST00000479958 USP17L2Q6R6M4 530 aa10.85□□□□□ -0.67
COMMD3-212ENST00000479958 USP17L1Q7RTZ2 530 aa10.85□□□□□ -0.67
COMMD3-212ENST00000479958 TRIM22Q8IYM9 498 aa10.85□□□□□ -0.67
COMMD3-212ENST00000479958 UCN2Q96RP3 112 aa10.85□□□□□ -0.67
COMMD3-212ENST00000479958 SERTAD1Q9UHV2 236 aa10.85□□□□□ -0.67
COMMD3-212ENST00000479958 PHKA2P46019 1235 aa10.84□□□□□ -0.67
COMMD3-212ENST00000479958 GPR161Q8N6U8 529 aaKnown RBP10.84□□□□□ -0.67
COMMD3-212ENST00000479958 SLC4A9Q96Q91 983 aa10.84□□□□□ -0.67
COMMD3-212ENST00000479958 TFIP11Q9UBB9 837 aaKnown RBP10.84□□□□□ -0.67
COMMD3-212ENST00000479958 GTF3C3Q9Y5Q9 886 aa10.84□□□□□ -0.67
COMMD3-212ENST00000479958 A0A1B0GTH6 734 aa10.84□□□□□ -0.67
COMMD3-212ENST00000479958 FAM181BA6NEQ2 426 aa10.84□□□□□ -0.67
COMMD3-212ENST00000479958 MKRN1Q9UHC7 482 aaKnown RBP10.84□□□□□ -0.67
COMMD3-212ENST00000479958 RBM19Q9Y4C8 960 aaKnown RBP10.84□□□□□ -0.67
COMMD3-212ENST00000479958 TMEM229AB2RXF0 380 aa10.83□□□□□ -0.68
COMMD3-212ENST00000479958 C4orf17Q53FE4 359 aa10.83□□□□□ -0.68
COMMD3-212ENST00000479958 ZSCAN1Q8NBB4 408 aa10.83□□□□□ -0.68
COMMD3-212ENST00000479958 COL25A1Q9BXS0 654 aaPredicted RBP10.83□□□□□ -0.68
COMMD3-212ENST00000479958 NIFKQ9BYG3 293 aaKnown RBP10.83□□□□□ -0.68
COMMD3-212ENST00000479958 STK17AQ9UEE5 414 aa10.83□□□□□ -0.68
COMMD3-212ENST00000479958 ZNF777Q9ULD5 760 aaPredicted RBP10.83□□□□□ -0.68
COMMD3-212ENST00000479958 A6NJY4 79 aa10.82□□□□□ -0.68
COMMD3-212ENST00000479958 CDK2AP1O14519 115 aa10.82□□□□□ -0.68
COMMD3-212ENST00000479958 CSB-PGBD3P0DP91 1061 aa10.81□□□□□ -0.68
COMMD3-212ENST00000479958 DBN1Q16643 649 aa10.81□□□□□ -0.68
COMMD3-212ENST00000479958 PGBD3Q8N328 593 aa10.81□□□□□ -0.68
COMMD3-212ENST00000479958 CNTNAP3BQ96NU0 1288 aa10.81□□□□□ -0.68
COMMD3-212ENST00000479958 CNTNAP3Q9BZ76 1288 aa10.81□□□□□ -0.68
COMMD3-212ENST00000479958 DNAAF2Q9NVR5 837 aaKnown RBP10.81□□□□□ -0.68
COMMD3-212ENST00000479958 CUEDC1Q9NWM3 386 aaPredicted RBP10.81□□□□□ -0.68
COMMD3-212ENST00000479958 PALM3A6NDB9 673 aaPredicted RBP10.8□□□□□ -0.68
COMMD3-212ENST00000479958 LARGE2Q8N3Y3 721 aa10.8□□□□□ -0.68
COMMD3-212ENST00000479958 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.8□□□□□ -0.68
COMMD3-212ENST00000479958 TRERF1Q96PN7 1200 aa10.8□□□□□ -0.68
COMMD3-212ENST00000479958 PPP1R12CQ9BZL4 782 aa10.8□□□□□ -0.68
COMMD3-212ENST00000479958 CCDC102BQ68D86 513 aa10.79□□□□□ -0.68
COMMD3-212ENST00000479958 OGFOD1Q8N543 542 aa10.79□□□□□ -0.68
COMMD3-212ENST00000479958 ZNF837Q96EG3 531 aaPredicted RBP10.79□□□□□ -0.68
COMMD3-212ENST00000479958 ZMYND15Q9H091 742 aa10.79□□□□□ -0.68
COMMD3-212ENST00000479958 NUCKS1Q9H1E3 243 aaKnown RBP10.79□□□□□ -0.68
COMMD3-212ENST00000479958 ZBTB7BO15156 539 aaPredicted RBP10.78□□□□□ -0.68
COMMD3-212ENST00000479958 MTFR1Q15390 333 aa10.78□□□□□ -0.68
COMMD3-212ENST00000479958 TPCN2Q8NHX9 752 aa10.78□□□□□ -0.68
COMMD3-212ENST00000479958 AIDAQ96BJ3 306 aa10.78□□□□□ -0.68
COMMD3-212ENST00000479958 ZNF358Q9NW07 568 aa10.78□□□□□ -0.68
COMMD3-212ENST00000479958 MAFBQ9Y5Q3 323 aaPredicted RBP10.78□□□□□ -0.68
COMMD3-212ENST00000479958 GPAMQ9HCL2 828 aa10.77□□□□□ -0.68
COMMD3-212ENST00000479958 RASA1P20936 1047 aa10.76□□□□□ -0.69
COMMD3-212ENST00000479958 MSX1P28360 303 aa10.76□□□□□ -0.69
COMMD3-212ENST00000479958 PLA2G4AP47712 749 aa10.76□□□□□ -0.69
COMMD3-212ENST00000479958 LBRQ14739 615 aaKnown RBP10.76□□□□□ -0.69
COMMD3-212ENST00000479958 EFHC2Q5JST6 749 aa10.76□□□□□ -0.69
COMMD3-212ENST00000479958 LARP1Q6PKG0 1096 aaKnown RBP10.76□□□□□ -0.69
COMMD3-212ENST00000479958 C1orf216Q8TAB5 229 aa10.76□□□□□ -0.69
COMMD3-212ENST00000479958 GTPBP3Q969Y2 492 aaKnown RBP10.76□□□□□ -0.69
COMMD3-212ENST00000479958 CABP1Q9NZU7 370 aa10.76□□□□□ -0.69
COMMD3-212ENST00000479958 CLDN10P78369 228 aa10.75□□□□□ -0.69
COMMD3-212ENST00000479958 NBPF1Q3BBV0 1214 aa10.75□□□□□ -0.69
COMMD3-212ENST00000479958 LMOD1P29536 600 aaPredicted RBP10.75□□□□□ -0.69
COMMD3-212ENST00000479958 VRTNQ9H8Y1 702 aa10.75□□□□□ -0.69
COMMD3-212ENST00000479958 SCHIP1Q9P0W5 487 aaPredicted RBP10.75□□□□□ -0.69
COMMD3-212ENST00000479958 PHF24Q9UPV7 400 aa10.75□□□□□ -0.69
COMMD3-212ENST00000479958 KRT76Q01546 638 aa10.74□□□□□ -0.69
COMMD3-212ENST00000479958 RNFT1Q5M7Z0 435 aa10.74□□□□□ -0.69
COMMD3-212ENST00000479958 M0R2N6 131 aa10.73□□□□□ -0.69
COMMD3-212ENST00000479958 TATP17735 454 aaPredicted RBP10.73□□□□□ -0.69
COMMD3-212ENST00000479958 IQSEC3Q9UPP2 1182 aaPredicted RBP10.73□□□□□ -0.69
COMMD3-212ENST00000479958 TNS4Q8IZW8 715 aa10.72□□□□□ -0.69
COMMD3-212ENST00000479958 SIX5Q8N196 739 aa10.72□□□□□ -0.69
COMMD3-212ENST00000479958 ZNF594Q96JF6 807 aaPredicted RBP10.72□□□□□ -0.69
COMMD3-212ENST00000479958 CFHR5Q9BXR6 569 aa10.72□□□□□ -0.69
COMMD3-212ENST00000479958 RUBCNLQ9H714 662 aa10.72□□□□□ -0.69
COMMD3-212ENST00000479958 NSFL1CQ9UNZ2 370 aaKnown RBP10.72□□□□□ -0.69
COMMD3-212ENST00000479958 CHMP3Q9Y3E7 222 aa10.72□□□□□ -0.69
COMMD3-212ENST00000479958 GPR25O00155 361 aa10.71□□□□□ -0.69
COMMD3-212ENST00000479958 SRSF11Q05519 484 aaKnown RBP10.71□□□□□ -0.69
COMMD3-212ENST00000479958 MBIPQ9NS73 344 aa10.71□□□□□ -0.69
COMMD3-212ENST00000479958 KIAA1024Q9UPX6 916 aa10.71□□□□□ -0.69
COMMD3-212ENST00000479958 SEC13P55735 322 aa10.7□□□□□ -0.7
COMMD3-212ENST00000479958 ARSJQ5FYB0 599 aaPredicted RBP10.7□□□□□ -0.7
COMMD3-212ENST00000479958 CRISPLD1Q9H336 500 aa10.7□□□□□ -0.7
COMMD3-212ENST00000479958 ZDHHC3Q9NYG2 299 aa10.7□□□□□ -0.7
COMMD3-212ENST00000479958 LORP23490 312 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms