RNA–Protein interactions for RNA: ENST00000479930.5

TTC3-216, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 8,998 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-216ENST00000479930 FBXW10Q5XX13 1052 aa10.42□□□□□ -0.74
TTC3-216ENST00000479930 FKBP4Q02790 459 aaKnown RBP eCLIP10.42□□□□□ -0.74
TTC3-216ENST00000479930 KIF5AQ12840 1032 aa10.42□□□□□ -0.74
TTC3-216ENST00000479930 GIMAP7Q8NHV1 300 aa10.42□□□□□ -0.74
TTC3-216ENST00000479930 ABL1P00519 1130 aa10.42□□□□□ -0.74
TTC3-216ENST00000479930 CCDC14Q49A88 953 aa10.42□□□□□ -0.74
TTC3-216ENST00000479930 C4orf50Q6ZRC1 276 aa10.42□□□□□ -0.74
TTC3-216ENST00000479930 F8W031 263 aaPredicted RBP10.42□□□□□ -0.74
TTC3-216ENST00000479930 NLRP6P59044 892 aa10.42□□□□□ -0.74
TTC3-216ENST00000479930 CCDC178Q5BJE1 867 aa10.42□□□□□ -0.74
TTC3-216ENST00000479930 CAVIN4Q5BKX8 364 aa10.42□□□□□ -0.74
TTC3-216ENST00000479930 ZNF444Q8N0Y2 327 aaPredicted RBP10.42□□□□□ -0.74
TTC3-216ENST00000479930 PIP4K2AP48426 406 aaPredicted RBP10.41□□□□□ -0.74
TTC3-216ENST00000479930 ATP5J2-PTCD1G3V325 749 aa10.41□□□□□ -0.74
TTC3-216ENST00000479930 SREK1Q8WXA9 508 aaKnown RBP10.41□□□□□ -0.74
TTC3-216ENST00000479930 UBAC1Q9BSL1 405 aa10.41□□□□□ -0.74
TTC3-216ENST00000479930 TSTA3Q13630 321 aaPredicted RBP10.41□□□□□ -0.74
TTC3-216ENST00000479930 NAT10Q9H0A0 1025 aaKnown RBP10.41□□□□□ -0.74
TTC3-216ENST00000479930 KIF4AO95239 1232 aa10.41□□□□□ -0.74
TTC3-216ENST00000479930 TERF1P54274 439 aa10.41□□□□□ -0.74
TTC3-216ENST00000479930 ACTN2P35609 894 aa10.41□□□□□ -0.74
TTC3-216ENST00000479930 MAP7D1Q3KQU3 841 aa10.41□□□□□ -0.74
TTC3-216ENST00000479930 BRDTQ58F21 947 aaPredicted RBP10.41□□□□□ -0.74
TTC3-216ENST00000479930 CGNL1Q0VF96 1302 aa10.41□□□□□ -0.74
TTC3-216ENST00000479930 TXLNBQ8N3L3 684 aa10.41□□□□□ -0.74
TTC3-216ENST00000479930 MICAL1Q8TDZ2 1067 aa10.41□□□□□ -0.74
TTC3-216ENST00000479930 ZNF287Q9HBT7 754 aa10.41□□□□□ -0.74
TTC3-216ENST00000479930 ARHGEF6Q15052 776 aa10.4□□□□□ -0.74
TTC3-216ENST00000479930 ESYT2A0FGR8 921 aa10.4□□□□□ -0.74
TTC3-216ENST00000479930 RASA3Q14644 834 aa10.4□□□□□ -0.74
TTC3-216ENST00000479930 NOP58Q9Y2X3 529 aaKnown RBP10.4□□□□□ -0.74
TTC3-216ENST00000479930 DDX11L8A8MPP1 907 aa10.4□□□□□ -0.74
TTC3-216ENST00000479930 EFCAB2Q5VUJ9 269 aa10.4□□□□□ -0.74
TTC3-216ENST00000479930 OGFOD1Q8N543 542 aa10.4□□□□□ -0.74
TTC3-216ENST00000479930 AFG3L2Q9Y4W6 797 aa10.4□□□□□ -0.74
TTC3-216ENST00000479930 KIAA0754O94854 1291 aa10.4□□□□□ -0.74
TTC3-216ENST00000479930 SEMA3FQ13275 785 aa10.4□□□□□ -0.74
TTC3-216ENST00000479930 ZNF467Q7Z7K2 595 aaPredicted RBP10.4□□□□□ -0.74
TTC3-216ENST00000479930 DACT3Q96B18 629 aaPredicted RBP10.4□□□□□ -0.74
TTC3-216ENST00000479930 VAT1LQ9HCJ6 419 aa10.4□□□□□ -0.74
TTC3-216ENST00000479930 GEN1Q17RS7 908 aa10.4□□□□□ -0.75
TTC3-216ENST00000479930 SIL1Q9H173 461 aa10.4□□□□□ -0.75
TTC3-216ENST00000479930 CCDC63Q8NA47 563 aa10.39□□□□□ -0.75
TTC3-216ENST00000479930 PALM3A6NDB9 673 aaPredicted RBP10.39□□□□□ -0.75
TTC3-216ENST00000479930 GOLGA6BA6NDN3 693 aa10.39□□□□□ -0.75
TTC3-216ENST00000479930 CDR2Q01850 454 aa10.39□□□□□ -0.75
TTC3-216ENST00000479930 PPFIBP1Q86W92 1011 aa10.39□□□□□ -0.75
TTC3-216ENST00000479930 SLC17A8Q8NDX2 589 aa10.39□□□□□ -0.75
TTC3-216ENST00000479930 SPDYE2BA6NHP3 402 aa10.39□□□□□ -0.75
TTC3-216ENST00000479930 SPDYE6P0CI01 402 aa10.39□□□□□ -0.75
TTC3-216ENST00000479930 N4BP2L2Q92802 583 aaPredicted RBP10.39□□□□□ -0.75
TTC3-216ENST00000479930 NCAPGQ9BPX3 1015 aa10.39□□□□□ -0.75
TTC3-216ENST00000479930 DNA2P51530 1060 aa10.39□□□□□ -0.75
TTC3-216ENST00000479930 CLIP1P30622 1438 aa10.39□□□□□ -0.75
TTC3-216ENST00000479930 WDR46O15213 610 aaKnown RBP10.39□□□□□ -0.75
TTC3-216ENST00000479930 SP4Q02446 784 aa10.39□□□□□ -0.75
TTC3-216ENST00000479930 PLEKHO1Q53GL0 409 aaPredicted RBP10.39□□□□□ -0.75
TTC3-216ENST00000479930 AKNAD1Q5T1N1 836 aa10.39□□□□□ -0.75
TTC3-216ENST00000479930 ATF7IPQ6VMQ6 1270 aa10.39□□□□□ -0.75
TTC3-216ENST00000479930 KCNG4Q8TDN1 519 aa10.39□□□□□ -0.75
TTC3-216ENST00000479930 IVNS1ABPQ9Y6Y0 642 aa10.39□□□□□ -0.75
TTC3-216ENST00000479930 TSG101Q99816 390 aa10.39□□□□□ -0.75
TTC3-216ENST00000479930 MYD88Q99836 296 aa10.39□□□□□ -0.75
TTC3-216ENST00000479930 CLSTN2Q9H4D0 955 aa10.39□□□□□ -0.75
TTC3-216ENST00000479930 ABT1Q9ULW3 272 aaKnown RBP10.39□□□□□ -0.75
TTC3-216ENST00000479930 M0QZ92 97 aa10.38□□□□□ -0.75
TTC3-216ENST00000479930 GINS2Q9Y248 185 aa10.38□□□□□ -0.75
TTC3-216ENST00000479930 B4DLN1 442 aa10.38□□□□□ -0.75
TTC3-216ENST00000479930 MRPL12P52815 198 aaKnown RBP10.38□□□□□ -0.75
TTC3-216ENST00000479930 RPUSD2Q8IZ73 545 aaKnown RBP10.38□□□□□ -0.75
TTC3-216ENST00000479930 RBM27Q9P2N5 1060 aaKnown RBP10.38□□□□□ -0.75
TTC3-216ENST00000479930 MINDY4BA8MYZ0 360 aa10.38□□□□□ -0.75
TTC3-216ENST00000479930 GAS8O95995 478 aa10.38□□□□□ -0.75
TTC3-216ENST00000479930 TMC2Q8TDI7 906 aa10.38□□□□□ -0.75
TTC3-216ENST00000479930 DDX49Q9Y6V7 483 aaKnown RBP10.38□□□□□ -0.75
TTC3-216ENST00000479930 VIMP08670 466 aaKnown RBP10.38□□□□□ -0.75
TTC3-216ENST00000479930 INF2Q27J81 1249 aa10.38□□□□□ -0.75
TTC3-216ENST00000479930 CCDC144CPQ8IYA2 1237 aa10.38□□□□□ -0.75
TTC3-216ENST00000479930 KIF9Q9HAQ2 790 aa10.38□□□□□ -0.75
TTC3-216ENST00000479930 SPG7Q9UQ90 795 aa10.38□□□□□ -0.75
TTC3-216ENST00000479930 BAG4O95429 457 aaKnown RBP10.38□□□□□ -0.75
TTC3-216ENST00000479930 RBM25P49756 843 aaKnown RBP10.38□□□□□ -0.75
TTC3-216ENST00000479930 AEBP1Q8IUX7 1158 aa10.38□□□□□ -0.75
TTC3-216ENST00000479930 C8orf37Q96NL8 207 aa10.37□□□□□ -0.75
TTC3-216ENST00000479930 LMCD1Q9NZU5 365 aa10.37□□□□□ -0.75
TTC3-216ENST00000479930 PARP3Q9Y6F1 533 aa10.37□□□□□ -0.75
TTC3-216ENST00000479930 DIAPH1O60610 1272 aaKnown RBP10.37□□□□□ -0.75
TTC3-216ENST00000479930 GMNNO75496 209 aa10.37□□□□□ -0.75
TTC3-216ENST00000479930 MCM10Q7L590 875 aa10.37□□□□□ -0.75
TTC3-216ENST00000479930 SLF2Q8IX21 1173 aa10.37□□□□□ -0.75
TTC3-216ENST00000479930 EIF5P55010 431 aaKnown RBP10.37□□□□□ -0.75
TTC3-216ENST00000479930 CCDC174Q6PII3 467 aa10.37□□□□□ -0.75
TTC3-216ENST00000479930 ZBED2Q9BTP6 218 aa10.37□□□□□ -0.75
TTC3-216ENST00000479930 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.37□□□□□ -0.751e-6■□□□□ 8
TTC3-216ENST00000479930 SERPINC1P01008 464 aa10.37□□□□□ -0.75
TTC3-216ENST00000479930 GJC1P36383 396 aa10.37□□□□□ -0.75
TTC3-216ENST00000479930 USP48Q86UV5 1035 aa10.37□□□□□ -0.75
TTC3-216ENST00000479930 UIMC1Q96RL1 719 aa10.37□□□□□ -0.75
TTC3-216ENST00000479930 KIAA1328Q86T90 577 aa10.37□□□□□ -0.75
TTC3-216ENST00000479930 UTP14CQ5TAP6 766 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms