RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 PARP3Q9Y6F1 533 aa15.85■□□□□ 0.13
CCDC18-208ENST00000479653 MON2Q7Z3U7 1717 aa15.85■□□□□ 0.13
CCDC18-208ENST00000479653 KCNA3P22001 575 aa15.84■□□□□ 0.13
CCDC18-208ENST00000479653 ITPK1Q13572 414 aa15.84■□□□□ 0.13
CCDC18-208ENST00000479653 DALRD3Q5D0E6 543 aaKnown RBP15.84■□□□□ 0.13
CCDC18-208ENST00000479653 RRS1Q15050 365 aaKnown RBP15.83■□□□□ 0.12
CCDC18-208ENST00000479653 CNKSR2Q8WXI2 1034 aa15.83■□□□□ 0.12
CCDC18-208ENST00000479653 RTCBQ9Y3I0 505 aaKnown RBP15.83■□□□□ 0.12
CCDC18-208ENST00000479653 FAM208AQ9UK61 1670 aaKnown RBP15.83■□□□□ 0.12
CCDC18-208ENST00000479653 VEGFAP15692 232 aaPredicted RBP15.82■□□□□ 0.12
CCDC18-208ENST00000479653 DCAF5Q96JK2 942 aa15.82■□□□□ 0.12
CCDC18-208ENST00000479653 ASAP1Q9ULH1 1129 aa15.82■□□□□ 0.12
CCDC18-208ENST00000479653 A0A1W2PP64 1363 aa15.82■□□□□ 0.12
CCDC18-208ENST00000479653 C10orf71Q711Q0 1435 aa15.82■□□□□ 0.12
CCDC18-208ENST00000479653 TOGARAM1Q9Y4F4 1720 aa15.82■□□□□ 0.12
CCDC18-208ENST00000479653 N4BP2Q86UW6 1770 aaPredicted RBP15.81■□□□□ 0.12
CCDC18-208ENST00000479653 TAF1LQ8IZX4 1826 aa15.81■□□□□ 0.12
CCDC18-208ENST00000479653 TMOD3Q9NYL9 352 aa15.81■□□□□ 0.12
CCDC18-208ENST00000479653 PCDH10Q9P2E7 1040 aa15.81■□□□□ 0.12
CCDC18-208ENST00000479653 MKRN1Q9UHC7 482 aaKnown RBP15.81■□□□□ 0.12
CCDC18-208ENST00000479653 SMG6Q86US8 1419 aaKnown RBP15.8■□□□□ 0.12
CCDC18-208ENST00000479653 RFC4P35249 363 aa15.8■□□□□ 0.12
CCDC18-208ENST00000479653 ARHGEF1Q92888 912 aaKnown RBP15.8■□□□□ 0.12
CCDC18-208ENST00000479653 GYS1P13807 737 aa15.79■□□□□ 0.12
CCDC18-208ENST00000479653 UBR3Q6ZT12 1888 aa15.79■□□□□ 0.12
CCDC18-208ENST00000479653 FOXN1O15353 648 aa15.78■□□□□ 0.12
CCDC18-208ENST00000479653 CACNB1Q02641 598 aaPredicted RBP15.78■□□□□ 0.12
CCDC18-208ENST00000479653 FAM161AQ3B820 660 aa15.78■□□□□ 0.12
CCDC18-208ENST00000479653 GLTPD2A6NH11 291 aa15.77■□□□□ 0.12
CCDC18-208ENST00000479653 CHRNA5P30532 468 aa15.77■□□□□ 0.12
CCDC18-208ENST00000479653 HSP90AB2PQ58FF8 381 aa15.77■□□□□ 0.12
CCDC18-208ENST00000479653 RTL1A6NKG5 1358 aa15.76■□□□□ 0.11
CCDC18-208ENST00000479653 RASSF7Q02833 373 aa15.76■□□□□ 0.11
CCDC18-208ENST00000479653 NKX1-1Q15270 411 aaPredicted RBP15.76■□□□□ 0.11
CCDC18-208ENST00000479653 PRDM10Q9NQV6 1147 aa15.76■□□□□ 0.11
CCDC18-208ENST00000479653 ATG3Q9NT62 314 aa15.76■□□□□ 0.11
CCDC18-208ENST00000479653 SPG7Q9UQ90 795 aa15.76■□□□□ 0.11
CCDC18-208ENST00000479653 RGPD2P0DJD1 1756 aa15.76■□□□□ 0.11
CCDC18-208ENST00000479653 KIAA1551Q9HCM1 1747 aa15.75■□□□□ 0.11
CCDC18-208ENST00000479653 AIDAQ96BJ3 306 aa15.75■□□□□ 0.11
CCDC18-208ENST00000479653 RBM42Q9BTD8 480 aaKnown RBP15.75■□□□□ 0.11
CCDC18-208ENST00000479653 RNF216Q9NWF9 866 aaPredicted RBP15.74■□□□□ 0.11
CCDC18-208ENST00000479653 KIF13BQ9NQT8 1826 aa15.73■□□□□ 0.11
CCDC18-208ENST00000479653 ZC3H4Q9UPT8 1303 aaKnown RBP15.73■□□□□ 0.11
CCDC18-208ENST00000479653 LMNB1P20700 586 aa15.73■□□□□ 0.11
CCDC18-208ENST00000479653 CARD11Q9BXL7 1154 aa15.73■□□□□ 0.11
CCDC18-208ENST00000479653 GGNBP2Q9H3C7 697 aa15.73■□□□□ 0.11
CCDC18-208ENST00000479653 CREBZFQ9NS37 354 aa15.73■□□□□ 0.11
CCDC18-208ENST00000479653 RPS6KA4O75676 772 aa15.72■□□□□ 0.11
CCDC18-208ENST00000479653 CTCFP49711 727 aaPredicted RBP15.72■□□□□ 0.11
CCDC18-208ENST00000479653 NEUROD1Q13562 356 aa15.72■□□□□ 0.11
CCDC18-208ENST00000479653 TNRC6CQ9HCJ0 1690 aaKnown RBP15.71■□□□□ 0.11
CCDC18-208ENST00000479653 RC3H1Q5TC82 1133 aaKnown RBP15.71■□□□□ 0.11
CCDC18-208ENST00000479653 INSRP06213 1382 aa15.71■□□□□ 0.11
CCDC18-208ENST00000479653 PKD1L3Q7Z443 1732 aa15.71■□□□□ 0.1
CCDC18-208ENST00000479653 LBX1P52954 281 aa15.7■□□□□ 0.1
CCDC18-208ENST00000479653 FKBP8Q14318 412 aa15.7■□□□□ 0.1
CCDC18-208ENST00000479653 DPY19L2Q6NUT2 758 aa15.7■□□□□ 0.1
CCDC18-208ENST00000479653 ABHD8Q96I13 439 aa15.7■□□□□ 0.1
CCDC18-208ENST00000479653 PUS7Q96PZ0 661 aaKnown RBP15.7■□□□□ 0.1
CCDC18-208ENST00000479653 SLC4A9Q96Q91 983 aa15.7■□□□□ 0.1
CCDC18-208ENST00000479653 SIN3AQ96ST3 1273 aa15.7■□□□□ 0.1
CCDC18-208ENST00000479653 SRP68Q9UHB9 627 aaKnown RBP15.7■□□□□ 0.1
CCDC18-208ENST00000479653 C4AP0C0L4 1744 aa15.69■□□□□ 0.1
CCDC18-208ENST00000479653 POTECB2RU33 542 aa15.69■□□□□ 0.1
CCDC18-208ENST00000479653 FYB1O15117 783 aa15.69■□□□□ 0.1
CCDC18-208ENST00000479653 DDR1Q08345 913 aa15.69■□□□□ 0.1
CCDC18-208ENST00000479653 IFNL2Q8IZJ0 200 aa15.69■□□□□ 0.1
CCDC18-208ENST00000479653 MLLT1Q03111 559 aaPredicted RBP15.68■□□□□ 0.1
CCDC18-208ENST00000479653 CHADLQ6NUI6 762 aa15.68■□□□□ 0.1
CCDC18-208ENST00000479653 CNTNAP4Q9C0A0 1308 aa15.68■□□□□ 0.1
CCDC18-208ENST00000479653 FLT4P35916 1363 aa15.67■□□□□ 0.1
CCDC18-208ENST00000479653 MAP2P11137 1827 aaKnown RBP15.67■□□□□ 0.1
CCDC18-208ENST00000479653 ITGB4P16144 1822 aa15.67■□□□□ 0.1
CCDC18-208ENST00000479653 PPM1GO15355 546 aaPredicted RBP15.67■□□□□ 0.1
CCDC18-208ENST00000479653 PHKG2P15735 406 aa15.67■□□□□ 0.1
CCDC18-208ENST00000479653 CCDC85CA6NKD9 419 aa15.66■□□□□ 0.1
CCDC18-208ENST00000479653 CNTNAP1P78357 1384 aa15.65■□□□□ 0.1
CCDC18-208ENST00000479653 VEGFBP49765 207 aa15.65■□□□□ 0.1
CCDC18-208ENST00000479653 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.65■□□□□ 0.18e-6■■■□□ 14.7
CCDC18-208ENST00000479653 ARFGEF1Q9Y6D6 1849 aa15.65■□□□□ 0.1
CCDC18-208ENST00000479653 POLRMTO00411 1230 aaKnown RBP15.64■□□□□ 0.09
CCDC18-208ENST00000479653 KDM6AO15550 1401 aaPredicted RBP15.64■□□□□ 0.09
CCDC18-208ENST00000479653 POTEIP0CG38 1075 aa15.64■□□□□ 0.09
CCDC18-208ENST00000479653 POTEJP0CG39 1038 aa15.64■□□□□ 0.09
CCDC18-208ENST00000479653 BRCA1P38398 1863 aaKnown RBP15.64■□□□□ 0.09
CCDC18-208ENST00000479653 KDRP35968 1356 aa15.63■□□□□ 0.09
CCDC18-208ENST00000479653 PTCD1O75127 700 aaKnown RBP15.63■□□□□ 0.09
CCDC18-208ENST00000479653 TTLL6Q8N841 843 aa15.63■□□□□ 0.09
CCDC18-208ENST00000479653 RNF39Q9H2S5 420 aa15.63■□□□□ 0.09
CCDC18-208ENST00000479653 WBP1LQ9NX94 342 aa15.63■□□□□ 0.09
CCDC18-208ENST00000479653 EMILIN1Q9Y6C2 1016 aa15.63■□□□□ 0.09
CCDC18-208ENST00000479653 USP42Q9H9J4 1324 aaKnown RBP15.63■□□□□ 0.09
CCDC18-208ENST00000479653 TM4SF1P30408 202 aa15.62■□□□□ 0.09
CCDC18-208ENST00000479653 CRKLP46109 303 aaKnown RBP15.62■□□□□ 0.09
CCDC18-208ENST00000479653 ERFEQ4G0M1 354 aa15.62■□□□□ 0.09
CCDC18-208ENST00000479653 NFKBIEO00221 500 aa15.61■□□□□ 0.09
CCDC18-208ENST00000479653 ZPR1O75312 459 aa15.61■□□□□ 0.09
CCDC18-208ENST00000479653 EYA1Q99502 592 aa15.61■□□□□ 0.09
CCDC18-208ENST00000479653 KIF24Q5T7B8 1368 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms