RNA–Protein interactions for RNA: ENST00000479598.5

SLC40A1-207, Transcript of solute carrier family 40 member 1, humanhuman

TSL 1 (best)

Gene SLC40A1, Length 993 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC40A1-207ENST00000479598 ATF5Q9Y2D1 282 aaPredicted RBP13□□□□□ -0.33
SLC40A1-207ENST00000479598 TAF1LQ8IZX4 1826 aa12.99□□□□□ -0.33
SLC40A1-207ENST00000479598 DCAF8L1A6NGE4 600 aa12.99□□□□□ -0.33
SLC40A1-207ENST00000479598 EXOC6Q8TAG9 804 aa12.99□□□□□ -0.33
SLC40A1-207ENST00000479598 SYTL4Q96C24 671 aaPredicted RBP12.99□□□□□ -0.33
SLC40A1-207ENST00000479598 ZNF521Q96K83 1311 aa12.98□□□□□ -0.33
SLC40A1-207ENST00000479598 AKT1S1Q96B36 256 aa12.98□□□□□ -0.33
SLC40A1-207ENST00000479598 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.98□□□□□ -0.33
SLC40A1-207ENST00000479598 CHD4Q14839 1912 aa12.98□□□□□ -0.33
SLC40A1-207ENST00000479598 SENP3-EIF4A1A0A087X0R7 540 aa12.97□□□□□ -0.33
SLC40A1-207ENST00000479598 ZBTB22O15209 634 aa12.97□□□□□ -0.33
SLC40A1-207ENST00000479598 U2AF1L5P0DN76 240 aaPredicted RBP12.97□□□□□ -0.33
SLC40A1-207ENST00000479598 U2AF1Q01081 240 aaKnown RBP eCLIP12.97□□□□□ -0.33
SLC40A1-207ENST00000479598 ZNF827Q17R98 1081 aa12.97□□□□□ -0.33
SLC40A1-207ENST00000479598 CDCA7LQ96GN5 454 aa12.97□□□□□ -0.33
SLC40A1-207ENST00000479598 SPG7Q9UQ90 795 aa12.97□□□□□ -0.33
SLC40A1-207ENST00000479598 C5P01031 1676 aa12.96□□□□□ -0.33
SLC40A1-207ENST00000479598 PCDH11XQ9BZA7 1347 aa12.96□□□□□ -0.33
SLC40A1-207ENST00000479598 PCDH11YQ9BZA8 1340 aa12.96□□□□□ -0.33
SLC40A1-207ENST00000479598 TCERG1O14776 1098 aaKnown RBP12.96□□□□□ -0.33
SLC40A1-207ENST00000479598 CYP27B1O15528 508 aa12.96□□□□□ -0.33
SLC40A1-207ENST00000479598 PLEKHO1Q53GL0 409 aaPredicted RBP12.96□□□□□ -0.33
SLC40A1-207ENST00000479598 ERICH6Q7L0X2 663 aa12.96□□□□□ -0.33
SLC40A1-207ENST00000479598 SLC16A10Q8TF71 515 aa12.96□□□□□ -0.33
SLC40A1-207ENST00000479598 CNKSR2Q8WXI2 1034 aa12.96□□□□□ -0.33
SLC40A1-207ENST00000479598 SGIP1Q9BQI5 828 aa12.96□□□□□ -0.33
SLC40A1-207ENST00000479598 ADAMTS8Q9UP79 889 aa12.96□□□□□ -0.33
SLC40A1-207ENST00000479598 PLEKHG2Q9H7P9 1386 aa12.95□□□□□ -0.34
SLC40A1-207ENST00000479598 HMGB2P26583 209 aaKnown RBP12.95□□□□□ -0.34
SLC40A1-207ENST00000479598 WDR43Q15061 677 aaKnown RBP eCLIP12.95□□□□□ -0.34
SLC40A1-207ENST00000479598 AMOTQ4VCS5 1084 aa12.95□□□□□ -0.34
SLC40A1-207ENST00000479598 RSPH6AQ9H0K4 717 aa12.95□□□□□ -0.34
SLC40A1-207ENST00000479598 TOGARAM1Q9Y4F4 1720 aa12.95□□□□□ -0.34
SLC40A1-207ENST00000479598 FCHSD2O94868 740 aa12.94□□□□□ -0.34
SLC40A1-207ENST00000479598 MS4A1P11836 297 aa12.94□□□□□ -0.34
SLC40A1-207ENST00000479598 PHKG2P15735 406 aa12.93□□□□□ -0.34
SLC40A1-207ENST00000479598 PRKAR2BP31323 418 aa12.93□□□□□ -0.34
SLC40A1-207ENST00000479598 KCNQ4P56696 695 aa12.93□□□□□ -0.34
SLC40A1-207ENST00000479598 NKX1-1Q15270 411 aaPredicted RBP12.93□□□□□ -0.34
SLC40A1-207ENST00000479598 ZNF530Q6P9A1 599 aaPredicted RBP12.93□□□□□ -0.34
SLC40A1-207ENST00000479598 IFNL2Q8IZJ0 200 aa12.93□□□□□ -0.34
SLC40A1-207ENST00000479598 NGEFQ8N5V2 710 aa12.93□□□□□ -0.34
SLC40A1-207ENST00000479598 SYT17Q9BSW7 474 aa12.93□□□□□ -0.34
SLC40A1-207ENST00000479598 TFCP2L1Q9NZI6 479 aa12.93□□□□□ -0.34
SLC40A1-207ENST00000479598 CCNL1Q9UK58 526 aaPredicted RBP12.93□□□□□ -0.34
SLC40A1-207ENST00000479598 SALL2Q9Y467 1007 aaPredicted RBP12.93□□□□□ -0.34
SLC40A1-207ENST00000479598 PNPLA7Q6ZV29 1317 aa12.92□□□□□ -0.34
SLC40A1-207ENST00000479598 MTHFSDQ2M296 383 aaKnown RBP12.92□□□□□ -0.34
SLC40A1-207ENST00000479598 PHACTR3Q96KR7 559 aa12.92□□□□□ -0.34
SLC40A1-207ENST00000479598 ARXQ96QS3 562 aa12.92□□□□□ -0.34
SLC40A1-207ENST00000479598 FHDC1Q9C0D6 1143 aaPredicted RBP12.92□□□□□ -0.34
SLC40A1-207ENST00000479598 YY1P25490 414 aa12.91□□□□□ -0.34
SLC40A1-207ENST00000479598 DUSP27Q5VZP5 1158 aa12.91□□□□□ -0.34
SLC40A1-207ENST00000479598 MPRIPQ6WCQ1 1025 aa12.91□□□□□ -0.34
SLC40A1-207ENST00000479598 TRMT2AQ8IZ69 625 aaKnown RBP12.91□□□□□ -0.34
SLC40A1-207ENST00000479598 NOP58Q9Y2X3 529 aaKnown RBP12.91□□□□□ -0.34
SLC40A1-207ENST00000479598 PLEKHF1Q96S99 279 aa12.9□□□□□ -0.34
SLC40A1-207ENST00000479598 CRBNQ96SW2 442 aa12.9□□□□□ -0.34
SLC40A1-207ENST00000479598 MAP3K5Q99683 1374 aa12.9□□□□□ -0.34
SLC40A1-207ENST00000479598 UBR3Q6ZT12 1888 aa12.89□□□□□ -0.35
SLC40A1-207ENST00000479598 POLD1P28340 1107 aa12.89□□□□□ -0.35
SLC40A1-207ENST00000479598 ANP32AP39687 249 aaKnown RBP12.89□□□□□ -0.35
SLC40A1-207ENST00000479598 GOLGA2Q08379 1002 aa12.89□□□□□ -0.35
SLC40A1-207ENST00000479598 SLFN5Q08AF3 891 aa12.89□□□□□ -0.35
SLC40A1-207ENST00000479598 AKAP4Q5JQC9 854 aa12.89□□□□□ -0.35
SLC40A1-207ENST00000479598 C1orf141Q5JVX7 400 aa12.89□□□□□ -0.35
SLC40A1-207ENST00000479598 SMARCC1Q92922 1105 aaPredicted RBP12.89□□□□□ -0.35
SLC40A1-207ENST00000479598 C4BP0C0L5 1744 aa12.88□□□□□ -0.35
SLC40A1-207ENST00000479598 HSP90AB1P08238 724 aaKnown RBP12.88□□□□□ -0.35
SLC40A1-207ENST00000479598 GAS2L2Q8NHY3 880 aa12.88□□□□□ -0.35
SLC40A1-207ENST00000479598 DCAF5Q96JK2 942 aa12.88□□□□□ -0.35
SLC40A1-207ENST00000479598 PNNQ9H307 717 aaKnown RBP12.88□□□□□ -0.35
SLC40A1-207ENST00000479598 PALLDQ8WX93 1383 aa12.88□□□□□ -0.35
SLC40A1-207ENST00000479598 UTRNP46939 3433 aa12.88□□□□□ -0.35
SLC40A1-207ENST00000479598 VIRMAQ69YN4 1812 aaKnown RBP12.88□□□□□ -0.35
SLC40A1-207ENST00000479598 HOXD11P31277 338 aaPredicted RBP12.87□□□□□ -0.35
SLC40A1-207ENST00000479598 COL23A1Q86Y22 540 aaPredicted RBP12.87□□□□□ -0.35
SLC40A1-207ENST00000479598 PIGBQ92521 554 aa12.87□□□□□ -0.35
SLC40A1-207ENST00000479598 IPO9Q96P70 1041 aaKnown RBP12.87□□□□□ -0.35
SLC40A1-207ENST00000479598 KDM6AO15550 1401 aaPredicted RBP12.87□□□□□ -0.35
SLC40A1-207ENST00000479598 KDM2BQ8NHM5 1336 aa12.87□□□□□ -0.35
SLC40A1-207ENST00000479598 SCN11AQ9UI33 1791 aa12.86□□□□□ -0.35
SLC40A1-207ENST00000479598 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.86□□□□□ -0.35
SLC40A1-207ENST00000479598 FLAD1Q8NFF5 587 aa12.86□□□□□ -0.35
SLC40A1-207ENST00000479598 LGR6Q9HBX8 967 aa12.86□□□□□ -0.35
SLC40A1-207ENST00000479598 GNAT3A8MTJ3 354 aa12.85□□□□□ -0.35
SLC40A1-207ENST00000479598 ERVV-2B6SEH9 535 aa12.85□□□□□ -0.35
SLC40A1-207ENST00000479598 RNMTO43148 476 aaKnown RBP12.85□□□□□ -0.35
SLC40A1-207ENST00000479598 NEFMP07197 916 aa12.85□□□□□ -0.35
SLC40A1-207ENST00000479598 CCDC146Q8IYE0 955 aa12.85□□□□□ -0.35
SLC40A1-207ENST00000479598 TMOD3Q9NYL9 352 aa12.85□□□□□ -0.35
SLC40A1-207ENST00000479598 DLG5Q8TDM6 1919 aa12.85□□□□□ -0.35
SLC40A1-207ENST00000479598 ZNF831Q5JPB2 1677 aa12.85□□□□□ -0.35
SLC40A1-207ENST00000479598 PLIN1O60240 522 aa12.84□□□□□ -0.35
SLC40A1-207ENST00000479598 NFE2L2Q16236 605 aa12.84□□□□□ -0.35
SLC40A1-207ENST00000479598 IL17REQ8NFR9 667 aa12.84□□□□□ -0.35
SLC40A1-207ENST00000479598 RUNDC1Q96C34 613 aa12.84□□□□□ -0.35
SLC40A1-207ENST00000479598 BACH2Q9BYV9 841 aa12.84□□□□□ -0.35
SLC40A1-207ENST00000479598 MAPK8IP3Q9UPT6 1336 aa12.84□□□□□ -0.35
SLC40A1-207ENST00000479598 E9PSI1 815 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms