RNA–Protein interactions for RNA: ENST00000479516.1

RNF8-205, Transcript of ring finger protein 8, humanhuman

TSL 1 (best)

Gene RNF8, Length 1,525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF8-205ENST00000479516 AKT1S1Q96B36 256 aa26.37■■□□□ 1.81
RNF8-205ENST00000479516 SLC4A9Q96Q91 983 aa26.37■■□□□ 1.81
RNF8-205ENST00000479516 PLEKHF1Q96S99 279 aa26.37■■□□□ 1.81
RNF8-205ENST00000479516 IL17REQ8NFR9 667 aa26.36■■□□□ 1.81
RNF8-205ENST00000479516 MAP3K5Q99683 1374 aa26.35■■□□□ 1.81
RNF8-205ENST00000479516 SIPA1L3O60292 1781 aaPredicted RBP26.35■■□□□ 1.81
RNF8-205ENST00000479516 STK32BQ9NY57 414 aa26.34■■□□□ 1.81
RNF8-205ENST00000479516 GAS2L2Q8NHY3 880 aa26.34■■□□□ 1.81
RNF8-205ENST00000479516 SMARCC1Q92922 1105 aaPredicted RBP26.34■■□□□ 1.81
RNF8-205ENST00000479516 SLC52A2Q9HAB3 445 aa26.34■■□□□ 1.81
RNF8-205ENST00000479516 LOC102724428A0A0B4J2F2 783 aa26.33■■□□□ 1.81
RNF8-205ENST00000479516 SIK1P57059 783 aa26.33■■□□□ 1.81
RNF8-205ENST00000479516 ITPK1Q13572 414 aa26.33■■□□□ 1.81
RNF8-205ENST00000479516 GNAT3A8MTJ3 354 aa26.32■■□□□ 1.8
RNF8-205ENST00000479516 C4BP0C0L5 1744 aa26.31■■□□□ 1.8
RNF8-205ENST00000479516 AMIGO3Q86WK7 504 aa26.31■■□□□ 1.8
RNF8-205ENST00000479516 QSER1Q2KHR3 1735 aa26.31■■□□□ 1.8
RNF8-205ENST00000479516 SLC39A6Q13433 755 aa26.3■■□□□ 1.8
RNF8-205ENST00000479516 SMIM5Q71RC9 77 aa26.3■■□□□ 1.8
RNF8-205ENST00000479516 DCTN1Q14203 1278 aa26.29■■□□□ 1.8
RNF8-205ENST00000479516 LINC00116Q8NCU8 138 aa26.29■■□□□ 1.8
RNF8-205ENST00000479516 CEMIPQ8WUJ3 1361 aa26.28■■□□□ 1.8
RNF8-205ENST00000479516 LRP5O75197 1615 aa26.28■■□□□ 1.8
RNF8-205ENST00000479516 MCM10Q7L590 875 aa26.28■■□□□ 1.8
RNF8-205ENST00000479516 RBM42Q9BTD8 480 aaKnown RBP26.28■■□□□ 1.8
RNF8-205ENST00000479516 COL5A3P25940 1745 aaPredicted RBP26.28■■□□□ 1.8
RNF8-205ENST00000479516 TJP1Q07157 1748 aa26.28■■□□□ 1.8
RNF8-205ENST00000479516 ZNF831Q5JPB2 1677 aa26.27■■□□□ 1.8
RNF8-205ENST00000479516 PTCD1O75127 700 aaKnown RBP26.27■■□□□ 1.8
RNF8-205ENST00000479516 PNPLA7Q6ZV29 1317 aa26.27■■□□□ 1.8
RNF8-205ENST00000479516 UBR3Q6ZT12 1888 aa26.27■■□□□ 1.8
RNF8-205ENST00000479516 ATP6V1AP38606 617 aa26.26■■□□□ 1.79
RNF8-205ENST00000479516 ADAMTS8Q9UP79 889 aa26.26■■□□□ 1.79
RNF8-205ENST00000479516 UBR2Q8IWV8 1755 aa26.26■■□□□ 1.79
RNF8-205ENST00000479516 KCPQ6ZWJ8 1503 aa26.25■■□□□ 1.79
RNF8-205ENST00000479516 MYH14Q7Z406 1995 aaKnown RBP26.25■■□□□ 1.79
RNF8-205ENST00000479516 CCDC146Q8IYE0 955 aa26.25■■□□□ 1.79
RNF8-205ENST00000479516 ZBTB7AO95365 584 aa26.24■■□□□ 1.79
RNF8-205ENST00000479516 TFCP2L1Q9NZI6 479 aa26.24■■□□□ 1.79
RNF8-205ENST00000479516 NFE2L2Q16236 605 aa26.21■■□□□ 1.79
RNF8-205ENST00000479516 KCNQ3O43525 872 aa26.2■■□□□ 1.79
RNF8-205ENST00000479516 COL23A1Q86Y22 540 aaPredicted RBP26.2■■□□□ 1.79
RNF8-205ENST00000479516 THUMPD2Q9BTF0 503 aaKnown RBP26.2■■□□□ 1.79
RNF8-205ENST00000479516 CICQ96RK0 1608 aaPredicted RBP26.2■■□□□ 1.78
RNF8-205ENST00000479516 ANP32CO43423 234 aa26.19■■□□□ 1.78
RNF8-205ENST00000479516 TEFQ10587 303 aa26.19■■□□□ 1.78
RNF8-205ENST00000479516 ATF5Q9Y2D1 282 aaPredicted RBP26.19■■□□□ 1.78
RNF8-205ENST00000479516 WDR43Q15061 677 aaKnown RBP eCLIP26.19■■□□□ 1.78
RNF8-205ENST00000479516 RRP7AQ9Y3A4 280 aaKnown RBP26.18■■□□□ 1.78
RNF8-205ENST00000479516 MAPK8IP3Q9UPT6 1336 aa26.17■■□□□ 1.78
RNF8-205ENST00000479516 DNAJC10Q8IXB1 793 aa26.16■■□□□ 1.78
RNF8-205ENST00000479516 RTF1Q92541 710 aaKnown RBP26.16■■□□□ 1.78
RNF8-205ENST00000479516 PTGER2P43116 358 aa26.15■■□□□ 1.78
RNF8-205ENST00000479516 COL24A1Q17RW2 1714 aa26.15■■□□□ 1.78
RNF8-205ENST00000479516 AK7Q96M32 723 aa26.15■■□□□ 1.78
RNF8-205ENST00000479516 HTATSF1O43719 755 aaKnown RBP26.14■■□□□ 1.78
RNF8-205ENST00000479516 PHF14O94880 888 aa26.14■■□□□ 1.78
RNF8-205ENST00000479516 TMPOP42166 694 aaKnown RBP26.14■■□□□ 1.78
RNF8-205ENST00000479516 ZNF790Q6PG37 636 aa26.14■■□□□ 1.78
RNF8-205ENST00000479516 ZNF496Q96IT1 587 aaPredicted RBP26.14■■□□□ 1.78
RNF8-205ENST00000479516 NEFMP07197 916 aa26.14■■□□□ 1.77
RNF8-205ENST00000479516 SGIP1Q9BQI5 828 aa26.14■■□□□ 1.77
RNF8-205ENST00000479516 PNNQ9H307 717 aaKnown RBP26.14■■□□□ 1.77
RNF8-205ENST00000479516 SPON1Q9HCB6 807 aa26.14■■□□□ 1.77
RNF8-205ENST00000479516 MIS18AQ9NYP9 233 aa26.14■■□□□ 1.77
RNF8-205ENST00000479516 GNPATO15228 680 aa26.13■■□□□ 1.77
RNF8-205ENST00000479516 RIPK4P57078 832 aa26.13■■□□□ 1.77
RNF8-205ENST00000479516 RUNDC1Q96C34 613 aa26.13■■□□□ 1.77
RNF8-205ENST00000479516 BTBD11A6QL63 1104 aa26.12■■□□□ 1.77
RNF8-205ENST00000479516 NEUROD2Q15784 382 aa26.12■■□□□ 1.77
RNF8-205ENST00000479516 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.11■■□□□ 1.77
RNF8-205ENST00000479516 MTFR1LQ9H019 292 aa26.11■■□□□ 1.77
RNF8-205ENST00000479516 KDM3BQ7LBC6 1761 aa26.11■■□□□ 1.77
RNF8-205ENST00000479516 SENP3-EIF4A1A0A087X0R7 540 aa26.1■■□□□ 1.77
RNF8-205ENST00000479516 MSH5O43196 834 aa26.1■■□□□ 1.77
RNF8-205ENST00000479516 CRKLP46109 303 aaKnown RBP26.1■■□□□ 1.77
RNF8-205ENST00000479516 PNISRQ8TF01 805 aaKnown RBP26.1■■□□□ 1.77
RNF8-205ENST00000479516 CNTNAP4Q9C0A0 1308 aa26.1■■□□□ 1.77
RNF8-205ENST00000479516 INTS5Q6P9B9 1019 aaKnown RBP26.09■■□□□ 1.77
RNF8-205ENST00000479516 MRS2Q9HD23 443 aa26.09■■□□□ 1.77
RNF8-205ENST00000479516 C4AP0C0L4 1744 aa26.09■■□□□ 1.77
RNF8-205ENST00000479516 PRAMEF22A3QJZ6 481 aa26.09■■□□□ 1.77
RNF8-205ENST00000479516 TTC5Q8N0Z6 440 aa26.09■■□□□ 1.77
RNF8-205ENST00000479516 TRIM35Q9UPQ4 493 aa26.09■■□□□ 1.77
RNF8-205ENST00000479516 CYP19A1P11511 503 aaPredicted RBP26.08■■□□□ 1.77
RNF8-205ENST00000479516 RC3H1Q5TC82 1133 aaKnown RBP26.08■■□□□ 1.77
RNF8-205ENST00000479516 MSL1Q68DK7 614 aa26.08■■□□□ 1.77
RNF8-205ENST00000479516 HEG1Q9ULI3 1381 aa26.07■■□□□ 1.76
RNF8-205ENST00000479516 TAF7Q15545 349 aaPredicted RBP26.07■■□□□ 1.76
RNF8-205ENST00000479516 SSFA2P28290 1259 aa26.05■■□□□ 1.76
RNF8-205ENST00000479516 VSIG10Q8N0Z9 540 aa26.05■■□□□ 1.76
RNF8-205ENST00000479516 SLC16A10Q8TF71 515 aa26.05■■□□□ 1.76
RNF8-205ENST00000479516 APAF1O14727 1248 aa26.04■■□□□ 1.76
RNF8-205ENST00000479516 RPS6KA4O75676 772 aa26.04■■□□□ 1.76
RNF8-205ENST00000479516 ARHGEF1Q92888 912 aaKnown RBP26.04■■□□□ 1.76
RNF8-205ENST00000479516 FMNL2Q96PY5 1086 aa26.03■■□□□ 1.76
RNF8-205ENST00000479516 ZBTB1Q9Y2K1 713 aa26.03■■□□□ 1.76
RNF8-205ENST00000479516 RTCBQ9Y3I0 505 aaKnown RBP26.03■■□□□ 1.76
RNF8-205ENST00000479516 CCDC87Q9NVE4 849 aa26.02■■□□□ 1.76
RNF8-205ENST00000479516 FLAD1Q8NFF5 587 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms