RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 TREHO43280 583 aa11.35□□□□□ -0.59
GAPVD1-217ENST00000479511 ERCC5P28715 1186 aaPredicted RBP11.35□□□□□ -0.59
GAPVD1-217ENST00000479511 RNF19AQ9NV58 838 aa11.35□□□□□ -0.59
GAPVD1-217ENST00000479511 CDV3Q9UKY7 258 aaKnown RBP11.35□□□□□ -0.59
GAPVD1-217ENST00000479511 FCF1Q9Y324 198 aaKnown RBP11.35□□□□□ -0.59
GAPVD1-217ENST00000479511 ATAD2Q6PL18 1390 aa11.35□□□□□ -0.59
GAPVD1-217ENST00000479511 ERVH48-1M5A8F1 160 aa11.34□□□□□ -0.59
GAPVD1-217ENST00000479511 EPHA4P54764 986 aa11.34□□□□□ -0.59
GAPVD1-217ENST00000479511 INTS6LQ5JSJ4 861 aaKnown RBP11.34□□□□□ -0.59
GAPVD1-217ENST00000479511 THSD4Q6ZMP0 1018 aa11.34□□□□□ -0.59
GAPVD1-217ENST00000479511 DSC3Q14574 896 aa11.33□□□□□ -0.6
GAPVD1-217ENST00000479511 FAM161BQ96MY7 647 aa11.33□□□□□ -0.6
GAPVD1-217ENST00000479511 TSPAN10Q9H1Z9 355 aaPredicted RBP11.33□□□□□ -0.6
GAPVD1-217ENST00000479511 CCDC87Q9NVE4 849 aa11.33□□□□□ -0.6
GAPVD1-217ENST00000479511 PPP1R1BQ9UD71 204 aaPredicted RBP11.33□□□□□ -0.6
GAPVD1-217ENST00000479511 SCAMP3O14828 347 aaKnown RBP11.32□□□□□ -0.6
GAPVD1-217ENST00000479511 NDUFB5O43674 189 aa11.32□□□□□ -0.6
GAPVD1-217ENST00000479511 S1PR4O95977 384 aa11.32□□□□□ -0.6
GAPVD1-217ENST00000479511 HMGB1P09429 215 aaKnown RBP11.32□□□□□ -0.6
GAPVD1-217ENST00000479511 GDF10P55107 478 aa11.32□□□□□ -0.6
GAPVD1-217ENST00000479511 ERVK-9P63128 1117 aa11.32□□□□□ -0.6
GAPVD1-217ENST00000479511 TJAP1Q5JTD0 557 aa11.32□□□□□ -0.6
GAPVD1-217ENST00000479511 CHMP7Q8WUX9 453 aaPredicted RBP11.32□□□□□ -0.6
GAPVD1-217ENST00000479511 OSBPL3Q9H4L5 887 aa11.32□□□□□ -0.6
GAPVD1-217ENST00000479511 SERTAD1Q9UHV2 236 aa11.32□□□□□ -0.6
GAPVD1-217ENST00000479511 A0A1W2PRU2 124 aa11.31□□□□□ -0.6
GAPVD1-217ENST00000479511 FZD6O60353 706 aa11.31□□□□□ -0.6
GAPVD1-217ENST00000479511 IGHA2P01877 340 aa11.31□□□□□ -0.6
GAPVD1-217ENST00000479511 C16orf46Q6P387 395 aa11.31□□□□□ -0.6
GAPVD1-217ENST00000479511 BRPF3Q9ULD4 1205 aa11.31□□□□□ -0.6
GAPVD1-217ENST00000479511 TNFRSF10BO14763 440 aa11.3□□□□□ -0.6
GAPVD1-217ENST00000479511 EIF1AXP47813 144 aaKnown RBP11.3□□□□□ -0.6
GAPVD1-217ENST00000479511 RAD51AP2Q09MP3 1159 aa11.3□□□□□ -0.6
GAPVD1-217ENST00000479511 BCL11AQ9H165 835 aa11.3□□□□□ -0.6
GAPVD1-217ENST00000479511 WASLO00401 505 aaPredicted RBP11.29□□□□□ -0.6
GAPVD1-217ENST00000479511 CC2D2BQ6DHV5 1058 aa11.29□□□□□ -0.6
GAPVD1-217ENST00000479511 NKX2-3Q8TAU0 364 aa11.29□□□□□ -0.6
GAPVD1-217ENST00000479511 ETNK1Q9HBU6 452 aa11.29□□□□□ -0.6
GAPVD1-217ENST00000479511 PARP2Q9UGN5 583 aa11.29□□□□□ -0.6
GAPVD1-217ENST00000479511 BACH1O14867 736 aa11.28□□□□□ -0.6
GAPVD1-217ENST00000479511 LDHBP07195 334 aaKnown RBP11.28□□□□□ -0.6
GAPVD1-217ENST00000479511 PLCB3Q01970 1234 aa11.28□□□□□ -0.6
GAPVD1-217ENST00000479511 TBCELQ5QJ74 424 aa11.28□□□□□ -0.6
GAPVD1-217ENST00000479511 COX20Q5RI15 118 aa11.28□□□□□ -0.6
GAPVD1-217ENST00000479511 TMC1Q8TDI8 760 aa11.28□□□□□ -0.6
GAPVD1-217ENST00000479511 UBXN4Q92575 508 aa11.28□□□□□ -0.6
GAPVD1-217ENST00000479511 VTI1AQ96AJ9 217 aa11.28□□□□□ -0.6
GAPVD1-217ENST00000479511 DUSP9Q99956 384 aaKnown RBP11.28□□□□□ -0.6
GAPVD1-217ENST00000479511 IL21Q9HBE4 155 aa11.28□□□□□ -0.6
GAPVD1-217ENST00000479511 TMPRSS4Q9NRS4 437 aa11.28□□□□□ -0.6
GAPVD1-217ENST00000479511 WWC3Q9ULE0 1092 aa11.28□□□□□ -0.6
GAPVD1-217ENST00000479511 INHAP05111 366 aa11.27□□□□□ -0.61
GAPVD1-217ENST00000479511 MAPK8P45983 427 aa11.27□□□□□ -0.61
GAPVD1-217ENST00000479511 EHHADHQ08426 723 aa11.27□□□□□ -0.61
GAPVD1-217ENST00000479511 VASH1Q7L8A9 365 aaPredicted RBP11.27□□□□□ -0.61
GAPVD1-217ENST00000479511 METTL16Q86W50 562 aaKnown RBP11.27□□□□□ -0.61
GAPVD1-217ENST00000479511 PIK3R5Q8WYR1 880 aa11.27□□□□□ -0.61
GAPVD1-217ENST00000479511 SETDB2Q96T68 719 aa11.27□□□□□ -0.61
GAPVD1-217ENST00000479511 PRKD2Q9BZL6 878 aa11.27□□□□□ -0.61
GAPVD1-217ENST00000479511 CYLDQ9NQC7 956 aa11.27□□□□□ -0.61
GAPVD1-217ENST00000479511 GPR182O15218 404 aa11.26□□□□□ -0.61
GAPVD1-217ENST00000479511 PPP1R12BO60237 982 aaPredicted RBP11.26□□□□□ -0.61
GAPVD1-217ENST00000479511 PRPF40AO75400 957 aaKnown RBP11.26□□□□□ -0.61
GAPVD1-217ENST00000479511 FOXK2Q01167 660 aa11.26□□□□□ -0.61
GAPVD1-217ENST00000479511 SF3A1Q15459 793 aaKnown RBP11.26□□□□□ -0.61
GAPVD1-217ENST00000479511 CITED4Q96RK1 184 aa11.26□□□□□ -0.61
GAPVD1-217ENST00000479511 HCSTQ9UBK5 93 aa11.26□□□□□ -0.61
GAPVD1-217ENST00000479511 MAP4K5Q9Y4K4 846 aa11.26□□□□□ -0.61
GAPVD1-217ENST00000479511 XPCQ01831 940 aaPredicted RBP11.25□□□□□ -0.61
GAPVD1-217ENST00000479511 FAM26DQ5JW98 314 aa11.25□□□□□ -0.61
GAPVD1-217ENST00000479511 TMEM87AQ8NBN3 555 aa11.25□□□□□ -0.61
GAPVD1-217ENST00000479511 SLC4A9Q96Q91 983 aa11.25□□□□□ -0.61
GAPVD1-217ENST00000479511 FAM129BQ96TA1 746 aa11.25□□□□□ -0.61
GAPVD1-217ENST00000479511 ESF1Q9H501 851 aaKnown RBP11.25□□□□□ -0.61
GAPVD1-217ENST00000479511 ZBTB39O15060 712 aa11.24□□□□□ -0.61
GAPVD1-217ENST00000479511 SMARCA5O60264 1052 aaPredicted RBP11.24□□□□□ -0.61
GAPVD1-217ENST00000479511 AAMPQ13685 434 aa11.24□□□□□ -0.61
GAPVD1-217ENST00000479511 NYAP1Q6ZVC0 841 aa11.24□□□□□ -0.61
GAPVD1-217ENST00000479511 KCTD12Q96CX2 325 aaKnown RBP11.24□□□□□ -0.61
GAPVD1-217ENST00000479511 C2orf49Q9BVC5 232 aaPredicted RBP11.24□□□□□ -0.61
GAPVD1-217ENST00000479511 STIM2Q9P246 746 aa11.24□□□□□ -0.61
GAPVD1-217ENST00000479511 TMC4Q7Z404 712 aa11.23□□□□□ -0.61
GAPVD1-217ENST00000479511 NT5DC4Q86YG4 428 aa11.23□□□□□ -0.61
GAPVD1-217ENST00000479511 DMRTB1Q96MA1 342 aa11.23□□□□□ -0.61
GAPVD1-217ENST00000479511 QTRT2Q9H974 415 aaKnown RBP11.23□□□□□ -0.61
GAPVD1-217ENST00000479511 LRFN2Q9ULH4 789 aa11.23□□□□□ -0.61
GAPVD1-217ENST00000479511 PPEF1O14829 653 aaPredicted RBP11.22□□□□□ -0.61
GAPVD1-217ENST00000479511 SKOR1P84550 965 aa11.22□□□□□ -0.61
GAPVD1-217ENST00000479511 DAB2P98082 770 aa11.22□□□□□ -0.61
GAPVD1-217ENST00000479511 ALKBH2Q6NS38 261 aa11.22□□□□□ -0.61
GAPVD1-217ENST00000479511 SLC9A9Q8IVB4 645 aa11.22□□□□□ -0.61
GAPVD1-217ENST00000479511 SCHIP1Q9P0W5 487 aaPredicted RBP11.22□□□□□ -0.61
GAPVD1-217ENST00000479511 CDK11BP21127 795 aaKnown RBP11.21□□□□□ -0.61
GAPVD1-217ENST00000479511 VARSP26640 1264 aaKnown RBP11.21□□□□□ -0.61
GAPVD1-217ENST00000479511 ATCAYQ86WG3 371 aa11.21□□□□□ -0.61
GAPVD1-217ENST00000479511 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.21□□□□□ -0.613e-6■■■□□ 18
GAPVD1-217ENST00000479511 CDK11AQ9UQ88 783 aaPredicted RBP11.21□□□□□ -0.61
GAPVD1-217ENST00000479511 FANCCQ00597 558 aa11.2□□□□□ -0.62
GAPVD1-217ENST00000479511 STAG2Q8N3U4 1231 aa11.2□□□□□ -0.62
GAPVD1-217ENST00000479511 ZNF784Q8NCA9 323 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms