RNA–Protein interactions for RNA: ENST00000479413.1

C9orf85-205, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 1 (best)

Gene C9orf85, Length 902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-205ENST00000479413 ATG3Q9NT62 314 aa19.57■□□□□ 0.72
C9orf85-205ENST00000479413 IGSF1Q8N6C5 1336 aa19.56■□□□□ 0.72
C9orf85-205ENST00000479413 ATP10DQ9P241 1426 aa19.56■□□□□ 0.72
C9orf85-205ENST00000479413 ERVV-2B6SEH9 535 aa19.55■□□□□ 0.72
C9orf85-205ENST00000479413 DCAF5Q96JK2 942 aa19.55■□□□□ 0.72
C9orf85-205ENST00000479413 PANK3Q9H999 370 aa19.55■□□□□ 0.72
C9orf85-205ENST00000479413 PLEKHO1Q53GL0 409 aaPredicted RBP19.54■□□□□ 0.72
C9orf85-205ENST00000479413 RTCBQ9Y3I0 505 aaKnown RBP19.53■□□□□ 0.72
C9orf85-205ENST00000479413 KDRP35968 1356 aa19.53■□□□□ 0.72
C9orf85-205ENST00000479413 ZNF831Q5JPB2 1677 aa19.52■□□□□ 0.72
C9orf85-205ENST00000479413 HSPA5P11021 654 aaKnown RBP19.52■□□□□ 0.72
C9orf85-205ENST00000479413 AMOTQ4VCS5 1084 aa19.52■□□□□ 0.72
C9orf85-205ENST00000479413 RBM42Q9BTD8 480 aaKnown RBP19.52■□□□□ 0.72
C9orf85-205ENST00000479413 GPBP1L1Q9HC44 474 aaPredicted RBP19.52■□□□□ 0.72
C9orf85-205ENST00000479413 MMP10P09238 476 aa19.51■□□□□ 0.71
C9orf85-205ENST00000479413 TRAPPC3LQ5T215 181 aa19.51■□□□□ 0.71
C9orf85-205ENST00000479413 ZNF530Q6P9A1 599 aaPredicted RBP19.51■□□□□ 0.71
C9orf85-205ENST00000479413 MORC1Q86VD1 984 aa19.51■□□□□ 0.71
C9orf85-205ENST00000479413 WWC3Q9ULE0 1092 aa19.51■□□□□ 0.71
C9orf85-205ENST00000479413 ADCY9O60503 1353 aa19.5■□□□□ 0.71
C9orf85-205ENST00000479413 ADRA2BP18089 450 aa19.5■□□□□ 0.71
C9orf85-205ENST00000479413 CABP4P57796 275 aa19.5■□□□□ 0.71
C9orf85-205ENST00000479413 C1orf141Q5JVX7 400 aa19.49■□□□□ 0.71
C9orf85-205ENST00000479413 NLGN1Q8N2Q7 840 aa19.49■□□□□ 0.71
C9orf85-205ENST00000479413 COL5A3P25940 1745 aaPredicted RBP19.48■□□□□ 0.71
C9orf85-205ENST00000479413 MTHFSP49914 203 aa19.48■□□□□ 0.71
C9orf85-205ENST00000479413 RC3H1Q5TC82 1133 aaKnown RBP19.48■□□□□ 0.71
C9orf85-205ENST00000479413 KDM6AO15550 1401 aaPredicted RBP19.48■□□□□ 0.71
C9orf85-205ENST00000479413 CNTNAP4Q9C0A0 1308 aa19.48■□□□□ 0.71
C9orf85-205ENST00000479413 CICQ96RK0 1608 aaPredicted RBP19.47■□□□□ 0.71
C9orf85-205ENST00000479413 ZNF526Q8TF50 670 aaPredicted RBP19.47■□□□□ 0.71
C9orf85-205ENST00000479413 RFC4P35249 363 aa19.46■□□□□ 0.71
C9orf85-205ENST00000479413 SLC4A9Q96Q91 983 aa19.46■□□□□ 0.71
C9orf85-205ENST00000479413 KNSTRNQ9Y448 316 aa19.46■□□□□ 0.71
C9orf85-205ENST00000479413 KIF13BQ9NQT8 1826 aa19.46■□□□□ 0.71
C9orf85-205ENST00000479413 TGFB2P61812 414 aa19.45■□□□□ 0.7
C9orf85-205ENST00000479413 AEBP1Q8IUX7 1158 aa19.45■□□□□ 0.7
C9orf85-205ENST00000479413 ARHGEF1Q92888 912 aaKnown RBP19.45■□□□□ 0.7
C9orf85-205ENST00000479413 PXDNLA1KZ92 1463 aa19.45■□□□□ 0.7
C9orf85-205ENST00000479413 RPS6KA4O75676 772 aa19.44■□□□□ 0.7
C9orf85-205ENST00000479413 SULT6B1Q6IMI4 303 aa19.44■□□□□ 0.7
C9orf85-205ENST00000479413 CCDC87Q9NVE4 849 aa19.44■□□□□ 0.7
C9orf85-205ENST00000479413 C10orf71Q711Q0 1435 aa19.43■□□□□ 0.7
C9orf85-205ENST00000479413 PTCD1O75127 700 aaKnown RBP19.43■□□□□ 0.7
C9orf85-205ENST00000479413 CCER1Q8TC90 406 aaPredicted RBP19.43■□□□□ 0.7
C9orf85-205ENST00000479413 PARP3Q9Y6F1 533 aa19.43■□□□□ 0.7
C9orf85-205ENST00000479413 C4AP0C0L4 1744 aa19.42■□□□□ 0.7
C9orf85-205ENST00000479413 GYS1P13807 737 aa19.42■□□□□ 0.7
C9orf85-205ENST00000479413 N4BP2Q86UW6 1770 aaPredicted RBP19.42■□□□□ 0.7
C9orf85-205ENST00000479413 NFATC2IPQ8NCF5 419 aa19.41■□□□□ 0.7
C9orf85-205ENST00000479413 BCS1LQ9Y276 419 aa19.41■□□□□ 0.7
C9orf85-205ENST00000479413 KIAA1551Q9HCM1 1747 aa19.41■□□□□ 0.7
C9orf85-205ENST00000479413 A0A0G2JLW4 131 aa19.4■□□□□ 0.7
C9orf85-205ENST00000479413 MYH14Q7Z406 1995 aaKnown RBP19.39■□□□□ 0.7
C9orf85-205ENST00000479413 IL13P35225 146 aa19.39■□□□□ 0.69
C9orf85-205ENST00000479413 CRKLP46109 303 aaKnown RBP19.39■□□□□ 0.69
C9orf85-205ENST00000479413 SCN11AQ9UI33 1791 aa19.39■□□□□ 0.69
C9orf85-205ENST00000479413 DPEP1P16444 411 aa19.37■□□□□ 0.69
C9orf85-205ENST00000479413 HSPA6P17066 643 aa19.37■□□□□ 0.69
C9orf85-205ENST00000479413 AKAP4Q5JQC9 854 aa19.37■□□□□ 0.69
C9orf85-205ENST00000479413 TJP1Q07157 1748 aa19.37■□□□□ 0.69
C9orf85-205ENST00000479413 FCHSD2O94868 740 aa19.36■□□□□ 0.69
C9orf85-205ENST00000479413 AMER1Q5JTC6 1135 aaPredicted RBP19.36■□□□□ 0.69
C9orf85-205ENST00000479413 ARHGAP27Q6ZUM4 889 aa19.36■□□□□ 0.69
C9orf85-205ENST00000479413 CEP350Q5VT06 3117 aa19.36■□□□□ 0.69
C9orf85-205ENST00000479413 USP42Q9H9J4 1324 aaKnown RBP19.35■□□□□ 0.69
C9orf85-205ENST00000479413 SLC52A2Q9HAB3 445 aa19.34■□□□□ 0.69
C9orf85-205ENST00000479413 SRP68Q9UHB9 627 aaKnown RBP19.34■□□□□ 0.69
C9orf85-205ENST00000479413 BRCA1P38398 1863 aaKnown RBP19.34■□□□□ 0.69
C9orf85-205ENST00000479413 KIF7Q2M1P5 1343 aa19.32■□□□□ 0.68
C9orf85-205ENST00000479413 KIF3CO14782 793 aa19.32■□□□□ 0.68
C9orf85-205ENST00000479413 FKBP8Q14318 412 aa19.32■□□□□ 0.68
C9orf85-205ENST00000479413 PIM2Q9P1W9 311 aa19.32■□□□□ 0.68
C9orf85-205ENST00000479413 MRC1P22897 1456 aa19.32■□□□□ 0.68
C9orf85-205ENST00000479413 ARFGEF1Q9Y6D6 1849 aa19.31■□□□□ 0.68
C9orf85-205ENST00000479413 ZPR1O75312 459 aa19.31■□□□□ 0.68
C9orf85-205ENST00000479413 HMOX1P09601 288 aa19.31■□□□□ 0.68
C9orf85-205ENST00000479413 INTS5Q6P9B9 1019 aaKnown RBP19.31■□□□□ 0.68
C9orf85-205ENST00000479413 DDR1Q08345 913 aa19.3■□□□□ 0.68
C9orf85-205ENST00000479413 DALRD3Q5D0E6 543 aaKnown RBP19.3■□□□□ 0.68
C9orf85-205ENST00000479413 DNAJC10Q8IXB1 793 aa19.3■□□□□ 0.68
C9orf85-205ENST00000479413 RNMTO43148 476 aaKnown RBP19.29■□□□□ 0.68
C9orf85-205ENST00000479413 DIAPH1O60610 1272 aaKnown RBP19.29■□□□□ 0.68
C9orf85-205ENST00000479413 KCNA3P22001 575 aa19.29■□□□□ 0.68
C9orf85-205ENST00000479413 LGR6Q9HBX8 967 aa19.29■□□□□ 0.68
C9orf85-205ENST00000479413 VIRMAQ69YN4 1812 aaKnown RBP19.29■□□□□ 0.68
C9orf85-205ENST00000479413 SOS1Q07889 1333 aaPredicted RBP19.28■□□□□ 0.68
C9orf85-205ENST00000479413 ADAMTS7Q9UKP4 1686 aa19.27■□□□□ 0.68
C9orf85-205ENST00000479413 POLRMTO00411 1230 aaKnown RBP19.27■□□□□ 0.68
C9orf85-205ENST00000479413 TOMM70O94826 608 aa19.27■□□□□ 0.68
C9orf85-205ENST00000479413 CYP19A1P11511 503 aaPredicted RBP19.27■□□□□ 0.68
C9orf85-205ENST00000479413 SLC39A6Q13433 755 aa19.27■□□□□ 0.68
C9orf85-205ENST00000479413 CC2D1BQ5T0F9 858 aaKnown RBP19.27■□□□□ 0.68
C9orf85-205ENST00000479413 USPL1Q5W0Q7 1092 aa19.27■□□□□ 0.68
C9orf85-205ENST00000479413 KCPQ6ZWJ8 1503 aa19.26■□□□□ 0.67
C9orf85-205ENST00000479413 MTHFSDQ2M296 383 aaKnown RBP19.26■□□□□ 0.67
C9orf85-205ENST00000479413 C9orf131Q5VYM1 1079 aa19.26■□□□□ 0.67
C9orf85-205ENST00000479413 COL15A1P39059 1388 aa19.25■□□□□ 0.67
C9orf85-205ENST00000479413 TM4SF1P30408 202 aa19.25■□□□□ 0.67
C9orf85-205ENST00000479413 VSIG10Q8N0Z9 540 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms