RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 SLAIN2Q9P270 581 aa8.86□□□□□ -0.99
RFC4-212ENST00000479307 OCLNQ16625 522 aa8.85□□□□□ -0.99
RFC4-212ENST00000479307 ZNF787Q6DD87 383 aa8.85□□□□□ -0.99
RFC4-212ENST00000479307 PHLDB3Q6NSJ2 640 aa8.85□□□□□ -0.99
RFC4-212ENST00000479307 ARHGEF10LQ9HCE6 1279 aa8.85□□□□□ -0.99
RFC4-212ENST00000479307 CXXC1Q9P0U4 656 aaPredicted RBP8.85□□□□□ -0.99
RFC4-212ENST00000479307 NACADO15069 1562 aa8.84□□□□□ -0.99
RFC4-212ENST00000479307 ARID4AP29374 1257 aaPredicted RBP8.84□□□□□ -0.99
RFC4-212ENST00000479307 WEE1P30291 646 aa8.84□□□□□ -0.99
RFC4-212ENST00000479307 CBLBQ13191 982 aa8.84□□□□□ -0.99
RFC4-212ENST00000479307 GAS2L2Q8NHY3 880 aa8.84□□□□□ -0.99
RFC4-212ENST00000479307 CCER1Q8TC90 406 aaPredicted RBP8.84□□□□□ -0.99
RFC4-212ENST00000479307 PRMT3O60678 531 aa8.83□□□□□ -1
RFC4-212ENST00000479307 IGFBP4P22692 258 aa8.83□□□□□ -1
RFC4-212ENST00000479307 EPHA4P54764 986 aa8.83□□□□□ -1
RFC4-212ENST00000479307 CLN3Q13286 438 aa8.83□□□□□ -1
RFC4-212ENST00000479307 XAGE2Q96GT9 111 aa8.83□□□□□ -1
RFC4-212ENST00000479307 ESYT1Q9BSJ8 1104 aa8.83□□□□□ -1
RFC4-212ENST00000479307 ZFAND3Q9H8U3 227 aa8.83□□□□□ -1
RFC4-212ENST00000479307 MTMR7Q9Y216 660 aa8.83□□□□□ -1
RFC4-212ENST00000479307 PTGIRP43119 386 aa8.82□□□□□ -1
RFC4-212ENST00000479307 MTFR1Q15390 333 aa8.82□□□□□ -1
RFC4-212ENST00000479307 TXNDC2Q86VQ3 553 aa8.82□□□□□ -1
RFC4-212ENST00000479307 MEIOBQ8N635 442 aa8.82□□□□□ -1
RFC4-212ENST00000479307 KDF1Q8NAX2 398 aaPredicted RBP8.82□□□□□ -1
RFC4-212ENST00000479307 PDZRN3Q9UPQ7 1066 aa8.82□□□□□ -1
RFC4-212ENST00000479307 IVNS1ABPQ9Y6Y0 642 aa8.82□□□□□ -1
RFC4-212ENST00000479307 A0A1W2PRU2 124 aa8.81□□□□□ -1
RFC4-212ENST00000479307 A6NJY4 79 aa8.81□□□□□ -1
RFC4-212ENST00000479307 FOXO3O43524 673 aa8.81□□□□□ -1
RFC4-212ENST00000479307 STAU1O95793 577 aaKnown RBP8.81□□□□□ -1
RFC4-212ENST00000479307 IL2RAP01589 272 aa8.81□□□□□ -1
RFC4-212ENST00000479307 SMTNP53814 917 aa8.81□□□□□ -1
RFC4-212ENST00000479307 TAS1R3Q7RTX0 852 aa8.81□□□□□ -1
RFC4-212ENST00000479307 TNS4Q8IZW8 715 aa8.81□□□□□ -1
RFC4-212ENST00000479307 HPS1Q92902 700 aa8.81□□□□□ -1
RFC4-212ENST00000479307 CNKSR1Q969H4 720 aa8.81□□□□□ -1
RFC4-212ENST00000479307 PRIMPOLQ96LW4 560 aa8.81□□□□□ -1
RFC4-212ENST00000479307 RAB6BQ9NRW1 208 aa8.81□□□□□ -1
RFC4-212ENST00000479307 SERTAD1Q9UHV2 236 aa8.81□□□□□ -1
RFC4-212ENST00000479307 HRH3Q9Y5N1 445 aa8.81□□□□□ -1
RFC4-212ENST00000479307 BICRAQ9NZM4 1560 aa8.81□□□□□ -1
RFC4-212ENST00000479307 FOXK2Q01167 660 aa8.8□□□□□ -1
RFC4-212ENST00000479307 NBPF15Q8N660 670 aa8.8□□□□□ -1
RFC4-212ENST00000479307 COL26A1Q96A83 441 aa8.8□□□□□ -1
RFC4-212ENST00000479307 TSEN34Q9BSV6 310 aaKnown RBP8.8□□□□□ -1
RFC4-212ENST00000479307 SCHIP1Q9P0W5 487 aaPredicted RBP8.8□□□□□ -1
RFC4-212ENST00000479307 PTCD1O75127 700 aaKnown RBP8.79□□□□□ -1
RFC4-212ENST00000479307 TLR1Q15399 786 aa8.79□□□□□ -1
RFC4-212ENST00000479307 NLRP3Q96P20 1036 aa8.79□□□□□ -1
RFC4-212ENST00000479307 GZF1Q9H116 711 aaPredicted RBP8.79□□□□□ -1
RFC4-212ENST00000479307 CECR2Q9BXF3 1484 aa8.78□□□□□ -1
RFC4-212ENST00000479307 ATAD2Q6PL18 1390 aa8.78□□□□□ -1
RFC4-212ENST00000479307 CAPN5O15484 640 aaPredicted RBP8.78□□□□□ -1
RFC4-212ENST00000479307 RELBQ01201 579 aa8.78□□□□□ -1
RFC4-212ENST00000479307 STAG2Q8N3U4 1231 aa8.78□□□□□ -1
RFC4-212ENST00000479307 SCG3Q8WXD2 468 aaKnown RBP8.78□□□□□ -1
RFC4-212ENST00000479307 AGBL1Q96MI9 1066 aa8.78□□□□□ -1
RFC4-212ENST00000479307 TSPAN10Q9H1Z9 355 aaPredicted RBP8.78□□□□□ -1
RFC4-212ENST00000479307 CDK2AP1O14519 115 aa8.77□□□□□ -1.01
RFC4-212ENST00000479307 UPP2O95045 317 aa8.77□□□□□ -1.01
RFC4-212ENST00000479307 AVPP01185 164 aa8.77□□□□□ -1.01
RFC4-212ENST00000479307 GPC1P35052 558 aa8.77□□□□□ -1.01
RFC4-212ENST00000479307 FKBP5Q13451 457 aaPredicted RBP8.77□□□□□ -1.01
RFC4-212ENST00000479307 SLC9A9Q8IVB4 645 aa8.77□□□□□ -1.01
RFC4-212ENST00000479307 ZNF775Q96BV0 537 aaPredicted RBP8.77□□□□□ -1.01
RFC4-212ENST00000479307 CHMP3Q9Y3E7 222 aa8.77□□□□□ -1.01
RFC4-212ENST00000479307 CCDC9Q9Y3X0 531 aaKnown RBP8.77□□□□□ -1.01
RFC4-212ENST00000479307 CC2D2AQ9P2K1 1620 aa8.76□□□□□ -1.01
RFC4-212ENST00000479307 MEN1O00255 615 aa8.76□□□□□ -1.01
RFC4-212ENST00000479307 C21orf2O43822 256 aa8.76□□□□□ -1.01
RFC4-212ENST00000479307 PSMA6P60900 246 aaKnown RBP8.76□□□□□ -1.01
RFC4-212ENST00000479307 CENPCQ03188 943 aa8.76□□□□□ -1.01
RFC4-212ENST00000479307 TMCO4Q5TGY1 634 aa8.76□□□□□ -1.01
RFC4-212ENST00000479307 LINC00528Q8N1L1 170 aa8.76□□□□□ -1.01
RFC4-212ENST00000479307 FHDC1Q9C0D6 1143 aaPredicted RBP8.76□□□□□ -1.01
RFC4-212ENST00000479307 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.76□□□□□ -1.01
RFC4-212ENST00000479307 IQSEC3Q9UPP2 1182 aaPredicted RBP8.76□□□□□ -1.01
RFC4-212ENST00000479307 SPINT1O43278 529 aa8.75□□□□□ -1.01
RFC4-212ENST00000479307 PPP1R12BO60237 982 aaPredicted RBP8.75□□□□□ -1.01
RFC4-212ENST00000479307 LGR5O75473 907 aa8.75□□□□□ -1.01
RFC4-212ENST00000479307 CTC1Q2NKJ3 1217 aa8.75□□□□□ -1.01
RFC4-212ENST00000479307 VTI1AQ96AJ9 217 aa8.75□□□□□ -1.01
RFC4-212ENST00000479307 ZNF395Q9H8N7 513 aaPredicted RBP8.75□□□□□ -1.01
RFC4-212ENST00000479307 EGFL7Q9UHF1 273 aa8.75□□□□□ -1.01
RFC4-212ENST00000479307 FAM187AA6NFU0 413 aa8.74□□□□□ -1.01
RFC4-212ENST00000479307 GTF2E1P29083 439 aaPredicted RBP8.74□□□□□ -1.01
RFC4-212ENST00000479307 SND1Q7KZF4 910 aaKnown RBP eCLIP8.74□□□□□ -1.01
RFC4-212ENST00000479307 PPARGC1BQ86YN6 1023 aaKnown RBP8.74□□□□□ -1.01
RFC4-212ENST00000479307 ZSCAN10Q96SZ4 725 aaPredicted RBP8.74□□□□□ -1.01
RFC4-212ENST00000479307 DGAT1O75907 488 aa8.73□□□□□ -1.01
RFC4-212ENST00000479307 RNF144AP50876 292 aaPredicted RBP8.73□□□□□ -1.01
RFC4-212ENST00000479307 POTEAQ6S8J7 498 aa8.73□□□□□ -1.01
RFC4-212ENST00000479307 C2orf49Q9BVC5 232 aaPredicted RBP8.73□□□□□ -1.01
RFC4-212ENST00000479307 SERPINB4P48594 390 aa8.72□□□□□ -1.01
RFC4-212ENST00000479307 SMCPP49901 116 aaPredicted RBP8.72□□□□□ -1.01
RFC4-212ENST00000479307 HIRAP54198 1017 aaPredicted RBP8.72□□□□□ -1.01
RFC4-212ENST00000479307 TEAD4Q15561 434 aa8.72□□□□□ -1.01
RFC4-212ENST00000479307 RHBDD1Q8TEB9 315 aa8.72□□□□□ -1.01
RFC4-212ENST00000479307 CHMP7Q8WUX9 453 aaPredicted RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms