RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 PPME1Q9Y570 386 aa8.23□□□□□ -1.09
RC3H1-204ENST00000479099 NEFLP07196 543 aa8.22□□□□□ -1.09
RC3H1-204ENST00000479099 INTS6LQ5JSJ4 861 aaKnown RBP8.22□□□□□ -1.09
RC3H1-204ENST00000479099 MICAL1Q8TDZ2 1067 aa8.22□□□□□ -1.09
RC3H1-204ENST00000479099 DNMT3LQ9UJW3 386 aa8.22□□□□□ -1.09
RC3H1-204ENST00000479099 PALM3A6NDB9 673 aaPredicted RBP8.21□□□□□ -1.1
RC3H1-204ENST00000479099 FAM181BA6NEQ2 426 aa8.21□□□□□ -1.1
RC3H1-204ENST00000479099 CBLBQ13191 982 aa8.21□□□□□ -1.1
RC3H1-204ENST00000479099 NBPF20Q3BBV1 942 aa8.21□□□□□ -1.1
RC3H1-204ENST00000479099 DPH6Q7L8W6 267 aa8.21□□□□□ -1.1
RC3H1-204ENST00000479099 MYH16Q9H6N6 1097 aa8.21□□□□□ -1.1
RC3H1-204ENST00000479099 TTLL8A6PVC2 850 aa8.2□□□□□ -1.1
RC3H1-204ENST00000479099 PPFIA3O75145 1194 aa8.2□□□□□ -1.1
RC3H1-204ENST00000479099 LMOD1P29536 600 aaPredicted RBP8.2□□□□□ -1.1
RC3H1-204ENST00000479099 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.2□□□□□ -1.1
RC3H1-204ENST00000479099 ZNF326Q5BKZ1 582 aaKnown RBP8.2□□□□□ -1.1
RC3H1-204ENST00000479099 NOP9Q86U38 636 aaKnown RBP8.2□□□□□ -1.1
RC3H1-204ENST00000479099 EXOC8Q8IYI6 725 aa8.2□□□□□ -1.1
RC3H1-204ENST00000479099 ZSCAN1Q8NBB4 408 aa8.2□□□□□ -1.1
RC3H1-204ENST00000479099 SPINT1O43278 529 aa8.19□□□□□ -1.1
RC3H1-204ENST00000479099 LORP23490 312 aaPredicted RBP8.19□□□□□ -1.1
RC3H1-204ENST00000479099 SUGT1Q9Y2Z0 365 aa8.19□□□□□ -1.1
RC3H1-204ENST00000479099 DZIP3Q86Y13 1208 aaKnown RBP8.18□□□□□ -1.1
RC3H1-204ENST00000479099 NPAS4Q8IUM7 802 aa8.18□□□□□ -1.1
RC3H1-204ENST00000479099 TPD52L2O43399 206 aaKnown RBP8.17□□□□□ -1.1
RC3H1-204ENST00000479099 RAB11FIP3O75154 756 aa8.17□□□□□ -1.1
RC3H1-204ENST00000479099 RECKO95980 971 aa8.17□□□□□ -1.1
RC3H1-204ENST00000479099 WASHC4Q2M389 1173 aa8.17□□□□□ -1.1
RC3H1-204ENST00000479099 TRIM34Q9BYJ4 488 aa8.17□□□□□ -1.1
RC3H1-204ENST00000479099 IRX6P78412 446 aaPredicted RBP8.16□□□□□ -1.1
RC3H1-204ENST00000479099 SOWAHDA6NJG2 315 aa8.15□□□□□ -1.1
RC3H1-204ENST00000479099 FIGNL2A6NMB9 653 aa8.15□□□□□ -1.1
RC3H1-204ENST00000479099 ESPNB1AK53 854 aa8.15□□□□□ -1.1
RC3H1-204ENST00000479099 MARSP56192 900 aaKnown RBP8.15□□□□□ -1.1
RC3H1-204ENST00000479099 PTSQ03393 145 aa8.15□□□□□ -1.1
RC3H1-204ENST00000479099 GORABQ5T7V8 394 aa8.15□□□□□ -1.1
RC3H1-204ENST00000479099 PHLDB3Q6NSJ2 640 aa8.15□□□□□ -1.1
RC3H1-204ENST00000479099 AGBL1Q96MI9 1066 aa8.15□□□□□ -1.1
RC3H1-204ENST00000479099 TMPRSS4Q9NRS4 437 aa8.15□□□□□ -1.1
RC3H1-204ENST00000479099 TMA7Q9Y2S6 64 aaKnown RBP8.15□□□□□ -1.1
RC3H1-204ENST00000479099 ERVH48-1M5A8F1 160 aa8.14□□□□□ -1.11
RC3H1-204ENST00000479099 ARID4AP29374 1257 aaPredicted RBP8.14□□□□□ -1.11
RC3H1-204ENST00000479099 RAB15P59190 212 aa8.14□□□□□ -1.11
RC3H1-204ENST00000479099 RELBQ01201 579 aa8.14□□□□□ -1.11
RC3H1-204ENST00000479099 CDCA8Q53HL2 280 aa8.14□□□□□ -1.11
RC3H1-204ENST00000479099 SEPT12Q8IYM1 358 aa8.14□□□□□ -1.11
RC3H1-204ENST00000479099 ZNF784Q8NCA9 323 aaPredicted RBP8.14□□□□□ -1.11
RC3H1-204ENST00000479099 ALG2Q9H553 416 aa8.14□□□□□ -1.11
RC3H1-204ENST00000479099 METTL14Q9HCE5 456 aaKnown RBP8.14□□□□□ -1.11
RC3H1-204ENST00000479099 TFIP11Q9UBB9 837 aaKnown RBP8.14□□□□□ -1.11
RC3H1-204ENST00000479099 ANKRD33BA6NCL7 494 aa8.13□□□□□ -1.11
RC3H1-204ENST00000479099 ZBBXA8MT70 800 aa8.13□□□□□ -1.11
RC3H1-204ENST00000479099 CCDC181Q5TID7 509 aa8.13□□□□□ -1.11
RC3H1-204ENST00000479099 TRIM52Q96A61 297 aa8.13□□□□□ -1.11
RC3H1-204ENST00000479099 GJD4Q96KN9 370 aaPredicted RBP8.13□□□□□ -1.11
RC3H1-204ENST00000479099 CDCA7Q9BWT1 371 aaPredicted RBP8.13□□□□□ -1.11
RC3H1-204ENST00000479099 SLC52A1Q9NWF4 448 aa8.13□□□□□ -1.11
RC3H1-204ENST00000479099 SBNO2Q9Y2G9 1366 aa8.12□□□□□ -1.11
RC3H1-204ENST00000479099 LILRA1O75019 489 aa8.12□□□□□ -1.11
RC3H1-204ENST00000479099 ADH1AP07327 375 aa8.12□□□□□ -1.11
RC3H1-204ENST00000479099 CTSOP43234 321 aaPredicted RBP8.12□□□□□ -1.11
RC3H1-204ENST00000479099 ELOAQ14241 798 aaKnown RBP8.12□□□□□ -1.11
RC3H1-204ENST00000479099 TEX2Q8IWB9 1127 aa8.12□□□□□ -1.11
RC3H1-204ENST00000479099 UCN2Q96RP3 112 aa8.12□□□□□ -1.11
RC3H1-204ENST00000479099 INSM2Q96T92 566 aaPredicted RBP8.12□□□□□ -1.11
RC3H1-204ENST00000479099 CUEDC1Q9NWM3 386 aaPredicted RBP8.12□□□□□ -1.11
RC3H1-204ENST00000479099 NDUFB9Q9Y6M9 179 aa8.12□□□□□ -1.11
RC3H1-204ENST00000479099 TLDC2A0PJX2 215 aa8.11□□□□□ -1.11
RC3H1-204ENST00000479099 ERCC5P28715 1186 aaPredicted RBP8.11□□□□□ -1.11
RC3H1-204ENST00000479099 LARGE2Q8N3Y3 721 aa8.11□□□□□ -1.11
RC3H1-204ENST00000479099 CCDC155Q8N6L0 562 aa8.11□□□□□ -1.11
RC3H1-204ENST00000479099 ZNF395Q9H8N7 513 aaPredicted RBP8.11□□□□□ -1.11
RC3H1-204ENST00000479099 POLMQ9NP87 494 aaPredicted RBP8.11□□□□□ -1.11
RC3H1-204ENST00000479099 MAFBQ9Y5Q3 323 aaPredicted RBP8.11□□□□□ -1.11
RC3H1-204ENST00000479099 SLC35F4A4IF30 521 aa8.1□□□□□ -1.11
RC3H1-204ENST00000479099 RNF217Q8TC41 542 aa8.1□□□□□ -1.11
RC3H1-204ENST00000479099 NANOS1Q8WY41 292 aaKnown RBP8.1□□□□□ -1.11
RC3H1-204ENST00000479099 LNPKQ9C0E8 428 aa8.1□□□□□ -1.11
RC3H1-204ENST00000479099 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.1□□□□□ -1.11
RC3H1-204ENST00000479099 FBXO45P0C2W1 286 aa8.09□□□□□ -1.11
RC3H1-204ENST00000479099 ADD1P35611 737 aaKnown RBP8.09□□□□□ -1.11
RC3H1-204ENST00000479099 PTGIRP43119 386 aa8.09□□□□□ -1.11
RC3H1-204ENST00000479099 FBXO33Q7Z6M2 555 aa8.09□□□□□ -1.11
RC3H1-204ENST00000479099 GPATCH3Q96I76 525 aa8.09□□□□□ -1.11
RC3H1-204ENST00000479099 PCDHB9Q9Y5E1 797 aa8.09□□□□□ -1.11
RC3H1-204ENST00000479099 SSFA2P28290 1259 aa8.08□□□□□ -1.12
RC3H1-204ENST00000479099 MCCD1P59942 119 aaPredicted RBP8.08□□□□□ -1.12
RC3H1-204ENST00000479099 HSP90AB4PQ58FF6 505 aa8.08□□□□□ -1.12
RC3H1-204ENST00000479099 TMEM164Q5U3C3 297 aa8.08□□□□□ -1.12
RC3H1-204ENST00000479099 EGFLAMQ63HQ2 1017 aa8.08□□□□□ -1.12
RC3H1-204ENST00000479099 KDF1Q8NAX2 398 aaPredicted RBP8.08□□□□□ -1.12
RC3H1-204ENST00000479099 ZMIZ1Q9ULJ6 1067 aa8.08□□□□□ -1.12
RC3H1-204ENST00000479099 GIGYF1O75420 1035 aaPredicted RBP8.07□□□□□ -1.12
RC3H1-204ENST00000479099 ITGA6P23229 1130 aa8.07□□□□□ -1.12
RC3H1-204ENST00000479099 SETQ01105 290 aaPredicted RBP8.07□□□□□ -1.12
RC3H1-204ENST00000479099 GPR161Q8N6U8 529 aaKnown RBP8.07□□□□□ -1.12
RC3H1-204ENST00000479099 CYLDQ9NQC7 956 aa8.07□□□□□ -1.12
RC3H1-204ENST00000479099 GPR37L1O60883 481 aa8.06□□□□□ -1.12
RC3H1-204ENST00000479099 VAC14Q08AM6 782 aa8.06□□□□□ -1.12
RC3H1-204ENST00000479099 TSNAXIP1Q2TAA8 658 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms