RNA–Protein interactions for RNA: ENST00000479042.1

LSP1P2-201, Transcript of LSP1 pseudogene 2, humanhuman

BASIC

Gene LSP1P2, Length 133 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P2-201ENST00000479042 SMARCC1Q92922 1105 aaPredicted RBP15.41■□□□□ 0.06
LSP1P2-201ENST00000479042 RBM42Q9BTD8 480 aaKnown RBP15.41■□□□□ 0.06
LSP1P2-201ENST00000479042 RSPH6AQ9H0K4 717 aa15.41■□□□□ 0.06
LSP1P2-201ENST00000479042 SPON1Q9HCB6 807 aa15.41■□□□□ 0.06
LSP1P2-201ENST00000479042 ADAMTS7Q9UKP4 1686 aa15.41■□□□□ 0.06
LSP1P2-201ENST00000479042 MRC1P22897 1456 aa15.4■□□□□ 0.06
LSP1P2-201ENST00000479042 ERVV-2B6SEH9 535 aa15.4■□□□□ 0.06
LSP1P2-201ENST00000479042 NFATC2IPQ8NCF5 419 aa15.4■□□□□ 0.06
LSP1P2-201ENST00000479042 PHACTR3Q96KR7 559 aa15.4■□□□□ 0.06
LSP1P2-201ENST00000479042 SLC4A9Q96Q91 983 aa15.4■□□□□ 0.06
LSP1P2-201ENST00000479042 MSH5O43196 834 aa15.39■□□□□ 0.05
LSP1P2-201ENST00000479042 PHF14O94880 888 aa15.39■□□□□ 0.05
LSP1P2-201ENST00000479042 PPP1R1BQ9UD71 204 aaPredicted RBP15.39■□□□□ 0.05
LSP1P2-201ENST00000479042 COL5A3P25940 1745 aaPredicted RBP15.39■□□□□ 0.05
LSP1P2-201ENST00000479042 TJP1Q07157 1748 aa15.39■□□□□ 0.05
LSP1P2-201ENST00000479042 UBR3Q6ZT12 1888 aa15.39■□□□□ 0.05
LSP1P2-201ENST00000479042 MAP3K5Q99683 1374 aa15.38■□□□□ 0.05
LSP1P2-201ENST00000479042 RNMTO43148 476 aaKnown RBP15.38■□□□□ 0.05
LSP1P2-201ENST00000479042 PTCD1O75127 700 aaKnown RBP15.38■□□□□ 0.05
LSP1P2-201ENST00000479042 ATP6V1AP38606 617 aa15.38■□□□□ 0.05
LSP1P2-201ENST00000479042 PTGER2P43116 358 aa15.38■□□□□ 0.05
LSP1P2-201ENST00000479042 MSL1Q68DK7 614 aa15.38■□□□□ 0.05
LSP1P2-201ENST00000479042 NUDCQ9Y266 331 aa15.38■□□□□ 0.05
LSP1P2-201ENST00000479042 SLC39A6Q13433 755 aa15.37■□□□□ 0.05
LSP1P2-201ENST00000479042 COL23A1Q86Y22 540 aaPredicted RBP15.37■□□□□ 0.05
LSP1P2-201ENST00000479042 AK7Q96M32 723 aa15.37■□□□□ 0.05
LSP1P2-201ENST00000479042 MTFR1LQ9H019 292 aa15.36■□□□□ 0.05
LSP1P2-201ENST00000479042 SIPA1L3O60292 1781 aaPredicted RBP15.36■□□□□ 0.05
LSP1P2-201ENST00000479042 KCPQ6ZWJ8 1503 aa15.35■□□□□ 0.05
LSP1P2-201ENST00000479042 GAS2L2Q8NHY3 880 aa15.35■□□□□ 0.05
LSP1P2-201ENST00000479042 SLC52A2Q9HAB3 445 aa15.35■□□□□ 0.05
LSP1P2-201ENST00000479042 GNPATO15228 680 aa15.34■□□□□ 0.05
LSP1P2-201ENST00000479042 IL17REQ8NFR9 667 aa15.34■□□□□ 0.05
LSP1P2-201ENST00000479042 MYBBP1AQ9BQG0 1328 aaKnown RBP15.34■□□□□ 0.05
LSP1P2-201ENST00000479042 DLG5Q8TDM6 1919 aa15.33■□□□□ 0.05
LSP1P2-201ENST00000479042 ZNF831Q5JPB2 1677 aa15.33■□□□□ 0.04
LSP1P2-201ENST00000479042 GNAT3A8MTJ3 354 aa15.33■□□□□ 0.04
LSP1P2-201ENST00000479042 DCTN1Q14203 1278 aa15.33■□□□□ 0.04
LSP1P2-201ENST00000479042 RALBP1Q15311 655 aa15.33■□□□□ 0.04
LSP1P2-201ENST00000479042 KLHL34Q8N239 644 aa15.33■□□□□ 0.04
LSP1P2-201ENST00000479042 SGIP1Q9BQI5 828 aa15.33■□□□□ 0.04
LSP1P2-201ENST00000479042 UBR2Q8IWV8 1755 aa15.33■□□□□ 0.04
LSP1P2-201ENST00000479042 COL24A1Q17RW2 1714 aa15.32■□□□□ 0.04
LSP1P2-201ENST00000479042 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.32■□□□□ 0.04
LSP1P2-201ENST00000479042 MCM10Q7L590 875 aa15.32■□□□□ 0.04
LSP1P2-201ENST00000479042 MYH14Q7Z406 1995 aaKnown RBP15.32■□□□□ 0.04
LSP1P2-201ENST00000479042 C4AP0C0L4 1744 aa15.31■□□□□ 0.04
LSP1P2-201ENST00000479042 CICQ96RK0 1608 aaPredicted RBP15.31■□□□□ 0.04
LSP1P2-201ENST00000479042 ZNF316A6NFI3 1004 aaPredicted RBP15.3■□□□□ 0.04
LSP1P2-201ENST00000479042 FCHSD2O94868 740 aa15.3■□□□□ 0.04
LSP1P2-201ENST00000479042 UTRNP46939 3433 aa15.3■□□□□ 0.04
LSP1P2-201ENST00000479042 DNAJC10Q8IXB1 793 aa15.3■□□□□ 0.04
LSP1P2-201ENST00000479042 FHDC1Q9C0D6 1143 aaPredicted RBP15.3■□□□□ 0.04
LSP1P2-201ENST00000479042 TEFQ10587 303 aa15.29■□□□□ 0.04
LSP1P2-201ENST00000479042 PRKRIP1Q9H875 184 aaPredicted RBP15.29■□□□□ 0.04
LSP1P2-201ENST00000479042 CEMIPQ8WUJ3 1361 aa15.28■□□□□ 0.04
LSP1P2-201ENST00000479042 KCNQ3O43525 872 aa15.28■□□□□ 0.04
LSP1P2-201ENST00000479042 CCDC146Q8IYE0 955 aa15.28■□□□□ 0.04
LSP1P2-201ENST00000479042 ARXQ96QS3 562 aa15.28■□□□□ 0.04
LSP1P2-201ENST00000479042 PLEKHF1Q96S99 279 aa15.28■□□□□ 0.04
LSP1P2-201ENST00000479042 CNTNAP4Q9C0A0 1308 aa15.27■□□□□ 0.04
LSP1P2-201ENST00000479042 CRKLP46109 303 aaKnown RBP15.27■□□□□ 0.04
LSP1P2-201ENST00000479042 SLC16A10Q8TF71 515 aa15.27■□□□□ 0.04
LSP1P2-201ENST00000479042 THUMPD2Q9BTF0 503 aaKnown RBP15.27■□□□□ 0.04
LSP1P2-201ENST00000479042 SSFA2P28290 1259 aa15.26■□□□□ 0.03
LSP1P2-201ENST00000479042 POLD1P28340 1107 aa15.26■□□□□ 0.03
LSP1P2-201ENST00000479042 RTF1Q92541 710 aaKnown RBP15.26■□□□□ 0.03
LSP1P2-201ENST00000479042 MAPK8IP3Q9UPT6 1336 aa15.25■□□□□ 0.03
LSP1P2-201ENST00000479042 TTC5Q8N0Z6 440 aa15.25■□□□□ 0.03
LSP1P2-201ENST00000479042 ZNF496Q96IT1 587 aaPredicted RBP15.25■□□□□ 0.03
LSP1P2-201ENST00000479042 RTCBQ9Y3I0 505 aaKnown RBP15.25■□□□□ 0.03
LSP1P2-201ENST00000479042 BTBD11A6QL63 1104 aa15.24■□□□□ 0.03
LSP1P2-201ENST00000479042 CCDC184Q52MB2 194 aa15.24■□□□□ 0.03
LSP1P2-201ENST00000479042 INTS5Q6P9B9 1019 aaKnown RBP15.24■□□□□ 0.03
LSP1P2-201ENST00000479042 FLAD1Q8NFF5 587 aa15.24■□□□□ 0.03
LSP1P2-201ENST00000479042 SYT17Q9BSW7 474 aa15.24■□□□□ 0.03
LSP1P2-201ENST00000479042 MIS18AQ9NYP9 233 aa15.24■□□□□ 0.03
LSP1P2-201ENST00000479042 SRP68Q9UHB9 627 aaKnown RBP15.24■□□□□ 0.03
LSP1P2-201ENST00000479042 RRP7AQ9Y3A4 280 aaKnown RBP15.24■□□□□ 0.03
LSP1P2-201ENST00000479042 NEFMP07197 916 aa15.23■□□□□ 0.03
LSP1P2-201ENST00000479042 NFE2L2Q16236 605 aa15.23■□□□□ 0.03
LSP1P2-201ENST00000479042 ZNF790Q6PG37 636 aa15.23■□□□□ 0.03
LSP1P2-201ENST00000479042 NLGN2Q8NFZ4 835 aa15.23■□□□□ 0.03
LSP1P2-201ENST00000479042 ARHGEF1Q92888 912 aaKnown RBP15.23■□□□□ 0.03
LSP1P2-201ENST00000479042 ZBTB1Q9Y2K1 713 aa15.23■□□□□ 0.03
LSP1P2-201ENST00000479042 KDM3BQ7LBC6 1761 aa15.22■□□□□ 0.03
LSP1P2-201ENST00000479042 SENP3-EIF4A1A0A087X0R7 540 aa15.22■□□□□ 0.03
LSP1P2-201ENST00000479042 PRAMEF22A3QJZ6 481 aa15.22■□□□□ 0.03
LSP1P2-201ENST00000479042 RPS6KA4O75676 772 aa15.22■□□□□ 0.03
LSP1P2-201ENST00000479042 CYP19A1P11511 503 aaPredicted RBP15.22■□□□□ 0.03
LSP1P2-201ENST00000479042 WDR43Q15061 677 aaKnown RBP eCLIP15.22■□□□□ 0.03
LSP1P2-201ENST00000479042 TRAPPC3LQ5T215 181 aa15.22■□□□□ 0.03
LSP1P2-201ENST00000479042 CCDC87Q9NVE4 849 aa15.22■□□□□ 0.03
LSP1P2-201ENST00000479042 HEG1Q9ULI3 1381 aa15.22■□□□□ 0.03
LSP1P2-201ENST00000479042 PIP4K2AP48426 406 aaPredicted RBP15.21■□□□□ 0.03
LSP1P2-201ENST00000479042 RC3H1Q5TC82 1133 aaKnown RBP15.21■□□□□ 0.03
LSP1P2-201ENST00000479042 WWC3Q9ULE0 1092 aa15.21■□□□□ 0.03
LSP1P2-201ENST00000479042 CANXP27824 592 aaKnown RBP15.2■□□□□ 0.02
LSP1P2-201ENST00000479042 RFC4P35249 363 aa15.2■□□□□ 0.02
LSP1P2-201ENST00000479042 NEUROD2Q15784 382 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms