RNA–Protein interactions for RNA: ENST00000478932.1

USP25-208, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best)

Gene USP25, Length 2,605 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-208ENST00000478932 HAP1P54257 671 aaPredicted RBP5.21□□□□□ -1.58
USP25-208ENST00000478932 PLEKHO1Q53GL0 409 aaPredicted RBP5.21□□□□□ -1.58
USP25-208ENST00000478932 C1orf141Q5JVX7 400 aa5.21□□□□□ -1.58
USP25-208ENST00000478932 LNPKQ9C0E8 428 aa5.21□□□□□ -1.58
USP25-208ENST00000478932 ABCC4O15439 1325 aa5.21□□□□□ -1.58
USP25-208ENST00000478932 SPATA31A3Q5VYP0 1347 aa5.21□□□□□ -1.58
USP25-208ENST00000478932 LTN1O94822 1766 aa5.2□□□□□ -1.58
USP25-208ENST00000478932 FKBP5Q13451 457 aaPredicted RBP5.2□□□□□ -1.58
USP25-208ENST00000478932 SMC5Q8IY18 1101 aa5.2□□□□□ -1.58
USP25-208ENST00000478932 PIP4P2Q8N4L2 257 aa5.2□□□□□ -1.58
USP25-208ENST00000478932 RAPGEF4Q8WZA2 1011 aa5.2□□□□□ -1.58
USP25-208ENST00000478932 IPO9Q96P70 1041 aaKnown RBP5.2□□□□□ -1.58
USP25-208ENST00000478932 STK31Q9BXU1 1019 aa5.2□□□□□ -1.58
USP25-208ENST00000478932 PHAXQ9H814 394 aaKnown RBP5.2□□□□□ -1.58
USP25-208ENST00000478932 BTBD11A6QL63 1104 aa5.2□□□□□ -1.58
USP25-208ENST00000478932 PITPNM1O00562 1244 aa5.2□□□□□ -1.58
USP25-208ENST00000478932 ANXA1P04083 346 aa5.2□□□□□ -1.58
USP25-208ENST00000478932 FLIIQ13045 1269 aa5.2□□□□□ -1.58
USP25-208ENST00000478932 AMOTQ4VCS5 1084 aa5.2□□□□□ -1.58
USP25-208ENST00000478932 AKAP4Q5JQC9 854 aa5.2□□□□□ -1.58
USP25-208ENST00000478932 ANKRD45Q5TZF3 282 aa5.2□□□□□ -1.58
USP25-208ENST00000478932 CCDC30Q5VVM6 783 aa5.2□□□□□ -1.58
USP25-208ENST00000478932 INTS3Q68E01 1043 aaKnown RBP5.2□□□□□ -1.58
USP25-208ENST00000478932 MEIS3Q99687 375 aa5.2□□□□□ -1.58
USP25-208ENST00000478932 PRAMEF22A3QJZ6 481 aa5.19□□□□□ -1.58
USP25-208ENST00000478932 APBB1O00213 710 aa5.19□□□□□ -1.58
USP25-208ENST00000478932 HDGFL1Q5TGJ6 251 aa5.19□□□□□ -1.58
USP25-208ENST00000478932 NFATC2IPQ8NCF5 419 aa5.19□□□□□ -1.58
USP25-208ENST00000478932 PRDM11Q9NQV5 511 aa5.19□□□□□ -1.58
USP25-208ENST00000478932 CEMIPQ8WUJ3 1361 aa5.19□□□□□ -1.58
USP25-208ENST00000478932 PTPRCP08575 1304 aa5.19□□□□□ -1.58
USP25-208ENST00000478932 RNMTO43148 476 aaKnown RBP5.19□□□□□ -1.58
USP25-208ENST00000478932 SLC4A3P48751 1232 aa5.19□□□□□ -1.58
USP25-208ENST00000478932 EIF4A1P60842 406 aaKnown RBP5.19□□□□□ -1.58
USP25-208ENST00000478932 SLC39A6Q13433 755 aa5.19□□□□□ -1.58
USP25-208ENST00000478932 USP35Q9P2H5 1018 aa5.19□□□□□ -1.58
USP25-208ENST00000478932 EP400Q96L91 3159 aa5.19□□□□□ -1.58
USP25-208ENST00000478932 DCCP43146 1447 aa5.18□□□□□ -1.58
USP25-208ENST00000478932 NCOA3Q9Y6Q9 1424 aa5.18□□□□□ -1.58
USP25-208ENST00000478932 RGPD2P0DJD1 1756 aa5.18□□□□□ -1.58
USP25-208ENST00000478932 NUCB1Q02818 461 aa5.18□□□□□ -1.58
USP25-208ENST00000478932 CHD1LQ86WJ1 897 aa5.18□□□□□ -1.58
USP25-208ENST00000478932 CHPF2Q9P2E5 772 aa5.18□□□□□ -1.58
USP25-208ENST00000478932 ZBTB47Q9UFB7 747 aaPredicted RBP5.18□□□□□ -1.58
USP25-208ENST00000478932 MED1Q15648 1581 aaPredicted RBP5.18□□□□□ -1.58
USP25-208ENST00000478932 RGS12O14924 1447 aa5.18□□□□□ -1.58
USP25-208ENST00000478932 CYP27B1O15528 508 aa5.18□□□□□ -1.58
USP25-208ENST00000478932 CHMP4BQ9H444 224 aaKnown RBP5.18□□□□□ -1.58
USP25-208ENST00000478932 STRN4Q9NRL3 753 aa5.18□□□□□ -1.58
USP25-208ENST00000478932 STRCQ7RTU9 1775 aa5.18□□□□□ -1.58
USP25-208ENST00000478932 PXDNQ92626 1479 aa5.18□□□□□ -1.58
USP25-208ENST00000478932 SOS2Q07890 1332 aaPredicted RBP5.17□□□□□ -1.58
USP25-208ENST00000478932 PI4KAP2A4QPH2 592 aa5.17□□□□□ -1.58
USP25-208ENST00000478932 TOM1L2Q6ZVM7 507 aa5.17□□□□□ -1.58
USP25-208ENST00000478932 ERICH6Q7L0X2 663 aa5.17□□□□□ -1.58
USP25-208ENST00000478932 C16orf71Q8IYS4 520 aaPredicted RBP5.17□□□□□ -1.58
USP25-208ENST00000478932 PI4KAP1Q8N8J0 262 aa5.17□□□□□ -1.58
USP25-208ENST00000478932 KAT6BQ8WYB5 2073 aa5.17□□□□□ -1.58
USP25-208ENST00000478932 TRPM3Q9HCF6 1732 aaPredicted RBP5.17□□□□□ -1.58
USP25-208ENST00000478932 SLIT3O75094 1523 aa5.17□□□□□ -1.58
USP25-208ENST00000478932 GIGYF1O75420 1035 aaPredicted RBP5.17□□□□□ -1.58
USP25-208ENST00000478932 TATP17735 454 aaPredicted RBP5.17□□□□□ -1.58
USP25-208ENST00000478932 PROSER3Q2NL68 480 aa5.17□□□□□ -1.58
USP25-208ENST00000478932 CEP85Q6P2H3 762 aa5.17□□□□□ -1.58
USP25-208ENST00000478932 BABAM1Q9NWV8 329 aa5.17□□□□□ -1.58
USP25-208ENST00000478932 NOP58Q9Y2X3 529 aaKnown RBP5.17□□□□□ -1.58
USP25-208ENST00000478932 TNS3Q68CZ2 1445 aa5.17□□□□□ -1.58
USP25-208ENST00000478932 RGPD5Q99666 1765 aa5.17□□□□□ -1.58
USP25-208ENST00000478932 PHKG2P15735 406 aa5.16□□□□□ -1.58
USP25-208ENST00000478932 CCT4P50991 539 aaKnown RBP5.16□□□□□ -1.58
USP25-208ENST00000478932 MKRN4PQ13434 485 aaPredicted RBP5.16□□□□□ -1.58
USP25-208ENST00000478932 ZNF790Q6PG37 636 aa5.16□□□□□ -1.58
USP25-208ENST00000478932 DDX54Q8TDD1 881 aaKnown RBP5.16□□□□□ -1.58
USP25-208ENST00000478932 GCC1Q96CN9 775 aa5.16□□□□□ -1.58
USP25-208ENST00000478932 USP44Q9H0E7 712 aa5.16□□□□□ -1.58
USP25-208ENST00000478932 SPG7Q9UQ90 795 aa5.16□□□□□ -1.58
USP25-208ENST00000478932 SSUH2Q9Y2M2 353 aa5.16□□□□□ -1.58
USP25-208ENST00000478932 USP54Q70EL1 1684 aa5.16□□□□□ -1.58
USP25-208ENST00000478932 SMARCA5O60264 1052 aaPredicted RBP5.16□□□□□ -1.58
USP25-208ENST00000478932 PIP4K2AP48426 406 aaPredicted RBP5.16□□□□□ -1.58
USP25-208ENST00000478932 EVA1CP58658 441 aa5.16□□□□□ -1.58
USP25-208ENST00000478932 AIMP1Q12904 312 aaKnown RBP5.16□□□□□ -1.58
USP25-208ENST00000478932 LARP1Q6PKG0 1096 aaKnown RBP5.16□□□□□ -1.58
USP25-208ENST00000478932 RPAP2Q8IXW5 612 aaPredicted RBP5.16□□□□□ -1.58
USP25-208ENST00000478932 IFNL2Q8IZJ0 200 aa5.16□□□□□ -1.58
USP25-208ENST00000478932 ANKRD44Q8N8A2 993 aa5.16□□□□□ -1.58
USP25-208ENST00000478932 OTUD7AQ8TE49 926 aaPredicted RBP5.16□□□□□ -1.58
USP25-208ENST00000478932 ZNF496Q96IT1 587 aaPredicted RBP5.16□□□□□ -1.58
USP25-208ENST00000478932 DCTPP1Q9H773 170 aa5.16□□□□□ -1.58
USP25-208ENST00000478932 ALS2Q96Q42 1657 aa5.15□□□□□ -1.58
USP25-208ENST00000478932 PNMA6EA0A0J9YXQ4 647 aa5.15□□□□□ -1.58
USP25-208ENST00000478932 NBPF7P0C2Y1 421 aaPredicted RBP5.15□□□□□ -1.58
USP25-208ENST00000478932 ANP32EQ9BTT0 268 aa5.15□□□□□ -1.58
USP25-208ENST00000478932 SLC52A2Q9HAB3 445 aa5.15□□□□□ -1.58
USP25-208ENST00000478932 DBF4Q9UBU7 674 aaPredicted RBP5.15□□□□□ -1.58
USP25-208ENST00000478932 EXOC6BQ9Y2D4 811 aa5.15□□□□□ -1.58
USP25-208ENST00000478932 XIRP1Q702N8 1843 aaKnown RBP5.15□□□□□ -1.58
USP25-208ENST00000478932 KIF1AQ12756 1690 aa5.15□□□□□ -1.58
USP25-208ENST00000478932 MEGF6O75095 1541 aa5.15□□□□□ -1.59
USP25-208ENST00000478932 GNAI2P04899 355 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms