RNA–Protein interactions for RNA: ENST00000478890.5

SRRM1-211, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-211ENST00000478890 PHF24Q9UPV7 400 aa3.46□□□□□ -1.86
SRRM1-211ENST00000478890 JAG2Q9Y219 1238 aa3.46□□□□□ -1.86
SRRM1-211ENST00000478890 DYRK1BQ9Y463 629 aa3.46□□□□□ -1.86
SRRM1-211ENST00000478890 CHSY3Q70JA7 882 aa3.45□□□□□ -1.86
SRRM1-211ENST00000478890 BPHLQ86WA6 291 aaPredicted RBP3.45□□□□□ -1.86
SRRM1-211ENST00000478890 DDRGK1Q96HY6 314 aa3.45□□□□□ -1.86
SRRM1-211ENST00000478890 AGBL1Q96MI9 1066 aa3.45□□□□□ -1.86
SRRM1-211ENST00000478890 KDM4CQ9H3R0 1056 aa3.45□□□□□ -1.86
SRRM1-211ENST00000478890 B8ZZF3 427 aa3.44□□□□□ -1.86
SRRM1-211ENST00000478890 PER1O15534 1290 aaPredicted RBP3.44□□□□□ -1.86
SRRM1-211ENST00000478890 RNF135Q8IUD6 432 aa3.44□□□□□ -1.86
SRRM1-211ENST00000478890 NUCKS1Q9H1E3 243 aaKnown RBP3.44□□□□□ -1.86
SRRM1-211ENST00000478890 LILRB3O75022 631 aa3.43□□□□□ -1.86
SRRM1-211ENST00000478890 AP1G2O75843 785 aa3.43□□□□□ -1.86
SRRM1-211ENST00000478890 F12P00748 615 aaPredicted RBP3.43□□□□□ -1.86
SRRM1-211ENST00000478890 RHOQP17081 205 aa3.43□□□□□ -1.86
SRRM1-211ENST00000478890 SSTR4P31391 388 aa3.43□□□□□ -1.86
SRRM1-211ENST00000478890 CD97P48960 835 aa3.43□□□□□ -1.86
SRRM1-211ENST00000478890 NEUROD2Q15784 382 aa3.43□□□□□ -1.86
SRRM1-211ENST00000478890 RTL5Q5HYW3 569 aaPredicted RBP3.43□□□□□ -1.86
SRRM1-211ENST00000478890 PNMA1Q8ND90 353 aa3.43□□□□□ -1.86
SRRM1-211ENST00000478890 SLC10A4Q96EP9 437 aa3.43□□□□□ -1.86
SRRM1-211ENST00000478890 C1QTNF2Q9BXJ5 285 aa3.43□□□□□ -1.86
SRRM1-211ENST00000478890 ZNF395Q9H8N7 513 aaPredicted RBP3.43□□□□□ -1.86
SRRM1-211ENST00000478890 BMP4P12644 408 aa3.42□□□□□ -1.86
SRRM1-211ENST00000478890 TUSC1Q2TAM9 212 aa3.42□□□□□ -1.86
SRRM1-211ENST00000478890 C4orf48Q5BLP8 95 aa3.42□□□□□ -1.86
SRRM1-211ENST00000478890 SH3D19Q5HYK7 790 aa3.42□□□□□ -1.86
SRRM1-211ENST00000478890 PRICKLE2Q7Z3G6 844 aa3.42□□□□□ -1.86
SRRM1-211ENST00000478890 TRMT44Q8IYL2 757 aaKnown RBP3.42□□□□□ -1.86
SRRM1-211ENST00000478890 TP53INP1Q96A56 240 aa3.42□□□□□ -1.86
SRRM1-211ENST00000478890 CSRNP1Q96S65 589 aa3.42□□□□□ -1.86
SRRM1-211ENST00000478890 ARHGAP9Q9BRR9 750 aa3.42□□□□□ -1.86
SRRM1-211ENST00000478890 FAM117AQ9C073 453 aa3.42□□□□□ -1.86
SRRM1-211ENST00000478890 DBX1A6NMT0 343 aa3.41□□□□□ -1.86
SRRM1-211ENST00000478890 C9orf172C9J069 976 aa3.41□□□□□ -1.86
SRRM1-211ENST00000478890 ZNF865P0CJ78 1059 aaPredicted RBP3.41□□□□□ -1.86
SRRM1-211ENST00000478890 CTDSPL2Q05D32 466 aa3.41□□□□□ -1.86
SRRM1-211ENST00000478890 SKIV2LQ15477 1246 aaKnown RBP3.41□□□□□ -1.86
SRRM1-211ENST00000478890 ZBTB33Q86T24 672 aa3.41□□□□□ -1.86
SRRM1-211ENST00000478890 LRRN4Q8WUT4 740 aa3.41□□□□□ -1.86
SRRM1-211ENST00000478890 GAS2L1Q99501 681 aaPredicted RBP3.41□□□□□ -1.86
SRRM1-211ENST00000478890 ARAFP10398 606 aa3.4□□□□□ -1.87
SRRM1-211ENST00000478890 BUD31P41223 144 aaPredicted RBP3.4□□□□□ -1.87
SRRM1-211ENST00000478890 RAB15P59190 212 aa3.4□□□□□ -1.87
SRRM1-211ENST00000478890 ADGRE1Q14246 886 aa3.4□□□□□ -1.87
SRRM1-211ENST00000478890 NR6A1Q15406 480 aa3.4□□□□□ -1.87
SRRM1-211ENST00000478890 LILRA6Q6PI73 481 aa3.4□□□□□ -1.87
SRRM1-211ENST00000478890 SLC51AQ86UW1 340 aa3.4□□□□□ -1.87
SRRM1-211ENST00000478890 TXNRD3Q86VQ6 643 aa3.4□□□□□ -1.87
SRRM1-211ENST00000478890 PROCA1Q8NCQ7 364 aaPredicted RBP3.4□□□□□ -1.87
SRRM1-211ENST00000478890 GPKOWQ92917 476 aaPredicted RBP eCLIP3.4□□□□□ -1.871e-32■■■□□ 14.7
SRRM1-211ENST00000478890 PCMTD1Q96MG8 357 aaPredicted RBP3.4□□□□□ -1.87
SRRM1-211ENST00000478890 FKBPLQ9UIM3 349 aa3.4□□□□□ -1.87
SRRM1-211ENST00000478890 RNF144AP50876 292 aaPredicted RBP3.39□□□□□ -1.87
SRRM1-211ENST00000478890 PTK2Q05397 1052 aa3.39□□□□□ -1.87
SRRM1-211ENST00000478890 DHX9Q08211 1270 aaKnown RBP3.39□□□□□ -1.87
SRRM1-211ENST00000478890 SH3BP5LQ7L8J4 393 aa3.39□□□□□ -1.87
SRRM1-211ENST00000478890 MICALL1Q8N3F8 863 aa3.39□□□□□ -1.87
SRRM1-211ENST00000478890 KIAA1324LA8MWY0 1029 aaPredicted RBP3.38□□□□□ -1.87
SRRM1-211ENST00000478890 USP17L8P0C7I0 530 aa3.38□□□□□ -1.87
SRRM1-211ENST00000478890 MBTPS1Q14703 1052 aa3.38□□□□□ -1.87
SRRM1-211ENST00000478890 NBPF20Q3BBV1 942 aa3.38□□□□□ -1.87
SRRM1-211ENST00000478890 KRTAP19-4Q3LI73 84 aa3.38□□□□□ -1.87
SRRM1-211ENST00000478890 ERFEQ4G0M1 354 aa3.38□□□□□ -1.87
SRRM1-211ENST00000478890 IL27Q8NEV9 243 aa3.38□□□□□ -1.87
SRRM1-211ENST00000478890 CDV3Q9UKY7 258 aaKnown RBP3.38□□□□□ -1.87
SRRM1-211ENST00000478890 ZC3H4Q9UPT8 1303 aaKnown RBP3.38□□□□□ -1.87
SRRM1-211ENST00000478890 C2CD2LO14523 706 aa3.37□□□□□ -1.87
SRRM1-211ENST00000478890 RFC5P40937 340 aa3.37□□□□□ -1.87
SRRM1-211ENST00000478890 TRIM28Q13263 835 aaKnown RBP3.37□□□□□ -1.87
SRRM1-211ENST00000478890 PDXDC2PQ6P474 469 aa3.37□□□□□ -1.87
SRRM1-211ENST00000478890 DZIP3Q86Y13 1208 aaKnown RBP3.37□□□□□ -1.87
SRRM1-211ENST00000478890 KCTD15Q96SI1 283 aaPredicted RBP3.37□□□□□ -1.87
SRRM1-211ENST00000478890 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.37□□□□□ -1.87
SRRM1-211ENST00000478890 NEURL1BA8MQ27 555 aa3.36□□□□□ -1.87
SRRM1-211ENST00000478890 PTGIRP43119 386 aa3.36□□□□□ -1.87
SRRM1-211ENST00000478890 TPRNQ4KMQ1 711 aa3.36□□□□□ -1.87
SRRM1-211ENST00000478890 PPP2R2DQ66LE6 453 aa3.36□□□□□ -1.87
SRRM1-211ENST00000478890 ADAM32Q8TC27 787 aa3.36□□□□□ -1.87
SRRM1-211ENST00000478890 HMX1Q9NP08 348 aaPredicted RBP3.36□□□□□ -1.87
SRRM1-211ENST00000478890 ATXN7L1Q9ULK2 861 aaPredicted RBP3.36□□□□□ -1.87
SRRM1-211ENST00000478890 F11P03951 625 aa3.35□□□□□ -1.87
SRRM1-211ENST00000478890 ADH1AP07327 375 aa3.35□□□□□ -1.87
SRRM1-211ENST00000478890 NRG1Q02297 640 aaPredicted RBP3.35□□□□□ -1.87
SRRM1-211ENST00000478890 TMEM259Q4ZIN3 620 aa3.35□□□□□ -1.87
SRRM1-211ENST00000478890 EPS8L1Q8TE68 723 aa3.35□□□□□ -1.87
SRRM1-211ENST00000478890 ASIC4Q96FT7 647 aa3.35□□□□□ -1.87
SRRM1-211ENST00000478890 SSBP4Q9BWG4 385 aaPredicted RBP3.35□□□□□ -1.87
SRRM1-211ENST00000478890 ESF1Q9H501 851 aaKnown RBP3.35□□□□□ -1.87
SRRM1-211ENST00000478890 ADGRE2Q9UHX3 823 aa3.35□□□□□ -1.87
SRRM1-211ENST00000478890 GPSM3Q9Y4H4 160 aa3.35□□□□□ -1.87
SRRM1-211ENST00000478890 PCDHB9Q9Y5E1 797 aa3.35□□□□□ -1.87
SRRM1-211ENST00000478890 FAM229AH3BQW9 127 aa3.34□□□□□ -1.87
SRRM1-211ENST00000478890 APBB1O00213 710 aa3.34□□□□□ -1.87
SRRM1-211ENST00000478890 GPC1P35052 558 aa3.34□□□□□ -1.87
SRRM1-211ENST00000478890 GRIK4Q16099 956 aa3.34□□□□□ -1.87
SRRM1-211ENST00000478890 INTS6LQ5JSJ4 861 aaKnown RBP3.34□□□□□ -1.87
SRRM1-211ENST00000478890 FBXO31Q5XUX0 539 aaPredicted RBP3.34□□□□□ -1.87
SRRM1-211ENST00000478890 LSRQ86X29 649 aaPredicted RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms