RNA–Protein interactions for RNA: ENST00000478720.1

ITSN2-211, Transcript of intersectin 2, humanhuman

TSL 2

Gene ITSN2, Length 2,035 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-211ENST00000478720 L1TD1Q5T7N2 865 aaKnown RBP18.48■□□□□ 0.55
ITSN2-211ENST00000478720 C14orf37Q86TY3 774 aa18.48■□□□□ 0.55
ITSN2-211ENST00000478720 CEMIPQ8WUJ3 1361 aa18.48■□□□□ 0.55
ITSN2-211ENST00000478720 TRAK2O60296 914 aa18.47■□□□□ 0.55
ITSN2-211ENST00000478720 TUBGCP6Q96RT7 1819 aa18.47■□□□□ 0.55
ITSN2-211ENST00000478720 USHBP1Q8N6Y0 703 aa18.47■□□□□ 0.55
ITSN2-211ENST00000478720 TNPO1Q92973 898 aaKnown RBP18.47■□□□□ 0.55
ITSN2-211ENST00000478720 PDE1AP54750 535 aa18.46■□□□□ 0.55
ITSN2-211ENST00000478720 KDM3BQ7LBC6 1761 aa18.46■□□□□ 0.55
ITSN2-211ENST00000478720 SALL3Q9BXA9 1300 aa18.45■□□□□ 0.54
ITSN2-211ENST00000478720 ATP8B2P98198 1209 aa18.45■□□□□ 0.54
ITSN2-211ENST00000478720 NECTIN2Q92692 538 aa18.45■□□□□ 0.54
ITSN2-211ENST00000478720 HSP90AA1P07900 732 aaKnown RBP18.45■□□□□ 0.54
ITSN2-211ENST00000478720 LMO7Q8WWI1 1683 aa18.45■□□□□ 0.54
ITSN2-211ENST00000478720 FSD2A1L4K1 749 aa18.44■□□□□ 0.54
ITSN2-211ENST00000478720 NBPF6Q5VWK0 638 aa18.44■□□□□ 0.54
ITSN2-211ENST00000478720 KCNH5Q8NCM2 988 aa18.44■□□□□ 0.54
ITSN2-211ENST00000478720 NBPF4Q96M43 638 aa18.44■□□□□ 0.54
ITSN2-211ENST00000478720 GBP4Q96PP9 640 aa18.44■□□□□ 0.54
ITSN2-211ENST00000478720 EXOC6BQ9Y2D4 811 aa18.44■□□□□ 0.54
ITSN2-211ENST00000478720 RGPD2P0DJD1 1756 aa18.43■□□□□ 0.54
ITSN2-211ENST00000478720 IBTKQ9P2D0 1353 aaPredicted RBP18.43■□□□□ 0.54
ITSN2-211ENST00000478720 REC8O95072 547 aa18.43■□□□□ 0.54
ITSN2-211ENST00000478720 HDGFL1Q5TGJ6 251 aa18.43■□□□□ 0.54
ITSN2-211ENST00000478720 LRRCC1Q9C099 1032 aa18.43■□□□□ 0.54
ITSN2-211ENST00000478720 PNMA6EA0A0J9YXQ4 647 aa18.42■□□□□ 0.54
ITSN2-211ENST00000478720 ERC2O15083 957 aa18.42■□□□□ 0.54
ITSN2-211ENST00000478720 PSME1Q06323 249 aa18.42■□□□□ 0.54
ITSN2-211ENST00000478720 LRRFIP2Q9Y608 721 aaKnown RBP18.42■□□□□ 0.54
ITSN2-211ENST00000478720 HOXB7P09629 217 aa18.41■□□□□ 0.54
ITSN2-211ENST00000478720 ESCO1Q5FWF5 840 aa18.41■□□□□ 0.54
ITSN2-211ENST00000478720 RBM33Q96EV2 1170 aaKnown RBP18.41■□□□□ 0.54
ITSN2-211ENST00000478720 USP44Q9H0E7 712 aa18.41■□□□□ 0.54
ITSN2-211ENST00000478720 FOXD4L1Q9NU39 408 aa18.41■□□□□ 0.54
ITSN2-211ENST00000478720 SETD1BQ9UPS6 1966 aaKnown RBP18.41■□□□□ 0.54
ITSN2-211ENST00000478720 ADAMTSL3P82987 1691 aa18.41■□□□□ 0.54
ITSN2-211ENST00000478720 PTMSP20962 102 aa18.4■□□□□ 0.54
ITSN2-211ENST00000478720 EIF4A1P60842 406 aaKnown RBP18.4■□□□□ 0.54
ITSN2-211ENST00000478720 RTN4Q9NQC3 1192 aaKnown RBP18.4■□□□□ 0.54
ITSN2-211ENST00000478720 SLIT3O75094 1523 aa18.4■□□□□ 0.54
ITSN2-211ENST00000478720 NCAPD2Q15021 1401 aa18.4■□□□□ 0.54
ITSN2-211ENST00000478720 GOLGA6L3A6NEY3 463 aa18.4■□□□□ 0.54
ITSN2-211ENST00000478720 CLEC17AQ6ZS10 378 aa18.39■□□□□ 0.53
ITSN2-211ENST00000478720 GZF1Q9H116 711 aaPredicted RBP18.39■□□□□ 0.53
ITSN2-211ENST00000478720 UBTFL1P0CB47 393 aaPredicted RBP18.39■□□□□ 0.53
ITSN2-211ENST00000478720 MX1P20591 662 aa18.39■□□□□ 0.53
ITSN2-211ENST00000478720 PHAXQ9H814 394 aaKnown RBP18.39■□□□□ 0.53
ITSN2-211ENST00000478720 LGR6Q9HBX8 967 aa18.39■□□□□ 0.53
ITSN2-211ENST00000478720 STAP2Q9UGK3 403 aa18.39■□□□□ 0.53
ITSN2-211ENST00000478720 AKAP4Q5JQC9 854 aa18.37■□□□□ 0.53
ITSN2-211ENST00000478720 SSH3Q8TE77 659 aa18.37■□□□□ 0.53
ITSN2-211ENST00000478720 CHMP4AQ9BY43 222 aa18.37■□□□□ 0.53
ITSN2-211ENST00000478720 SRCIN1Q9C0H9 1055 aa18.37■□□□□ 0.53
ITSN2-211ENST00000478720 NPHP4O75161 1426 aaPredicted RBP18.37■□□□□ 0.53
ITSN2-211ENST00000478720 AOX1Q06278 1338 aa18.36■□□□□ 0.53
ITSN2-211ENST00000478720 CAMTA1Q9Y6Y1 1673 aa18.36■□□□□ 0.53
ITSN2-211ENST00000478720 ST18O60284 1047 aa18.36■□□□□ 0.53
ITSN2-211ENST00000478720 SSFA2P28290 1259 aa18.36■□□□□ 0.53
ITSN2-211ENST00000478720 SKOR2Q2VWA4 1001 aaPredicted RBP18.36■□□□□ 0.53
ITSN2-211ENST00000478720 PLEKHO1Q53GL0 409 aaPredicted RBP18.36■□□□□ 0.53
ITSN2-211ENST00000478720 OVOS2A0A0G2JMS6 1433 aa18.36■□□□□ 0.53
ITSN2-211ENST00000478720 XRCC6P12956 609 aaKnown RBP eCLIP18.35■□□□□ 0.53
ITSN2-211ENST00000478720 TSHZ3Q63HK5 1081 aa18.35■□□□□ 0.53
ITSN2-211ENST00000478720 ZNF530Q6P9A1 599 aaPredicted RBP18.35■□□□□ 0.53
ITSN2-211ENST00000478720 ARHGEF25Q86VW2 580 aa18.35■□□□□ 0.53
ITSN2-211ENST00000478720 LRRC59Q96AG4 307 aaKnown RBP18.35■□□□□ 0.53
ITSN2-211ENST00000478720 TRPM3Q9HCF6 1732 aaPredicted RBP18.35■□□□□ 0.53
ITSN2-211ENST00000478720 POLA2Q14181 598 aa18.35■□□□□ 0.53
ITSN2-211ENST00000478720 AMOTQ4VCS5 1084 aa18.35■□□□□ 0.53
ITSN2-211ENST00000478720 ESYT1Q9BSJ8 1104 aa18.35■□□□□ 0.53
ITSN2-211ENST00000478720 DNAJC5Q9H3Z4 198 aa18.35■□□□□ 0.53
ITSN2-211ENST00000478720 ZBTB7CA1YPR0 619 aa18.34■□□□□ 0.53
ITSN2-211ENST00000478720 EIF2S2P20042 333 aaKnown RBP18.34■□□□□ 0.53
ITSN2-211ENST00000478720 ISY1Q9ULR0 285 aaKnown RBP18.34■□□□□ 0.53
ITSN2-211ENST00000478720 KCNQ3O43525 872 aa18.33■□□□□ 0.53
ITSN2-211ENST00000478720 RAB11FIP3O75154 756 aa18.33■□□□□ 0.53
ITSN2-211ENST00000478720 GCP02774 474 aa18.33■□□□□ 0.53
ITSN2-211ENST00000478720 CHPF2Q9P2E5 772 aa18.33■□□□□ 0.53
ITSN2-211ENST00000478720 PXDNQ92626 1479 aa18.33■□□□□ 0.52
ITSN2-211ENST00000478720 NUCB2P80303 420 aa18.33■□□□□ 0.52
ITSN2-211ENST00000478720 TEFQ10587 303 aa18.33■□□□□ 0.52
ITSN2-211ENST00000478720 CWC22Q9HCG8 908 aaKnown RBP18.33■□□□□ 0.52
ITSN2-211ENST00000478720 BTBD11A6QL63 1104 aa18.32■□□□□ 0.52
ITSN2-211ENST00000478720 CYP2E1P05181 493 aaPredicted RBP18.32■□□□□ 0.52
ITSN2-211ENST00000478720 CHMLP26374 656 aa18.32■□□□□ 0.52
ITSN2-211ENST00000478720 BEND3Q5T5X7 828 aa18.32■□□□□ 0.52
ITSN2-211ENST00000478720 PPP1R42Q7Z4L9 355 aa18.32■□□□□ 0.52
ITSN2-211ENST00000478720 DNAAF4Q8WXU2 420 aa18.32■□□□□ 0.52
ITSN2-211ENST00000478720 ORAI2Q96SN7 254 aa18.32■□□□□ 0.52
ITSN2-211ENST00000478720 RNMTO43148 476 aaKnown RBP18.32■□□□□ 0.52
ITSN2-211ENST00000478720 FAM43AQ8N2R8 423 aa18.32■□□□□ 0.52
ITSN2-211ENST00000478720 LMTK3Q96Q04 1460 aa18.31■□□□□ 0.52
ITSN2-211ENST00000478720 BAG4O95429 457 aaKnown RBP18.31■□□□□ 0.52
ITSN2-211ENST00000478720 MRE11P49959 708 aa18.31■□□□□ 0.52
ITSN2-211ENST00000478720 MPRIPQ6WCQ1 1025 aa18.31■□□□□ 0.52
ITSN2-211ENST00000478720 SIPA1L3O60292 1781 aaPredicted RBP18.31■□□□□ 0.52
ITSN2-211ENST00000478720 ADCY9O60503 1353 aa18.3■□□□□ 0.52
ITSN2-211ENST00000478720 KIF1AQ12756 1690 aa18.3■□□□□ 0.52
ITSN2-211ENST00000478720 AK9Q5TCS8 1911 aa18.3■□□□□ 0.52
ITSN2-211ENST00000478720 TRIM6-TRIM34B2RNG4 842 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms