RNA–Protein interactions for RNA: ENST00000478709.1

CBS-213, Transcript of cystathionine-beta-synthase, human

TSL 3

Gene CBS, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBS-213	ENST00000478709	FLAD1	Q8NFF5	587 aa		32.15	■■■□□ 2.74
CBS-213	ENST00000478709	TUBGCP6	Q96RT7	1819 aa		32.14	■■■□□ 2.74
CBS-213	ENST00000478709	POLD1	P28340	1107 aa		32.13	■■■□□ 2.73
CBS-213	ENST00000478709	DDX10	Q13206	875 aa	Known RBP	32.13	■■■□□ 2.73
CBS-213	ENST00000478709	U2AF1L5	P0DN76	240 aa	Predicted RBP	32.12	■■■□□ 2.73
CBS-213	ENST00000478709	U2AF1	Q01081	240 aa	Known RBP eCLIP	32.12	■■■□□ 2.73
CBS-213	ENST00000478709	COL23A1	Q86Y22	540 aa	Predicted RBP	32.12	■■■□□ 2.73
CBS-213	ENST00000478709	GAS2L2	Q8NHY3	880 aa		32.12	■■■□□ 2.73
CBS-213	ENST00000478709	LINC00116	Q8NCU8	138 aa		32.11	■■■□□ 2.73
CBS-213	ENST00000478709	TAF1L	Q8IZX4	1826 aa		32.11	■■■□□ 2.73
CBS-213	ENST00000478709	C4B	P0C0L5	1744 aa		32.11	■■■□□ 2.73
CBS-213	ENST00000478709	RNMT	O43148	476 aa	Known RBP	32.1	■■■□□ 2.73
CBS-213	ENST00000478709	ITPK1	Q13572	414 aa		32.1	■■■□□ 2.73
CBS-213	ENST00000478709	SGIP1	Q9BQI5	828 aa		32.1	■■■□□ 2.73
CBS-213	ENST00000478709	SLC52A2	Q9HAB3	445 aa		32.1	■■■□□ 2.73
CBS-213	ENST00000478709	LGR6	Q9HBX8	967 aa		32.1	■■■□□ 2.73
CBS-213	ENST00000478709	PRKAR2B	P31323	418 aa		32.09	■■■□□ 2.73
CBS-213	ENST00000478709	ARX	Q96QS3	562 aa		32.09	■■■□□ 2.73
CBS-213	ENST00000478709	PHF14	O94880	888 aa		32.08	■■■□□ 2.73
CBS-213	ENST00000478709	RSPH6A	Q9H0K4	717 aa		32.07	■■■□□ 2.72
CBS-213	ENST00000478709	DCAF8L1	A6NGE4	600 aa		32.06	■■■□□ 2.72
CBS-213	ENST00000478709	GNPAT	O15228	680 aa		32.06	■■■□□ 2.72
CBS-213	ENST00000478709	PTCD1	O75127	700 aa	Known RBP	32.06	■■■□□ 2.72
CBS-213	ENST00000478709	SCN11A	Q9UI33	1791 aa		32.05	■■■□□ 2.72
CBS-213	ENST00000478709	FHDC1	Q9C0D6	1143 aa	Predicted RBP	32.05	■■■□□ 2.72
CBS-213	ENST00000478709	MAP3K5	Q99683	1374 aa		32.05	■■■□□ 2.72
CBS-213	ENST00000478709	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	32.04	■■■□□ 2.72
CBS-213	ENST00000478709	GNAT3	A8MTJ3	354 aa		32.04	■■■□□ 2.72
CBS-213	ENST00000478709	RALBP1	Q15311	655 aa		32.04	■■■□□ 2.72
CBS-213	ENST00000478709	FCHSD2	O94868	740 aa		32.03	■■■□□ 2.72
CBS-213	ENST00000478709	SSFA2	P28290	1259 aa		32.03	■■■□□ 2.72
CBS-213	ENST00000478709	SLC4A9	Q96Q91	983 aa		32.03	■■■□□ 2.72
CBS-213	ENST00000478709	MSL1	Q68DK7	614 aa		32.01	■■■□□ 2.71
CBS-213	ENST00000478709	KLHL34	Q8N239	644 aa		32.01	■■■□□ 2.71
CBS-213	ENST00000478709	MRC1	P22897	1456 aa		32	■■■□□ 2.71
CBS-213	ENST00000478709	PHACTR3	Q96KR7	559 aa		32	■■■□□ 2.71
CBS-213	ENST00000478709	NEFM	P07197	916 aa		31.99	■■■□□ 2.71
CBS-213	ENST00000478709	TEF	Q10587	303 aa		31.99	■■■□□ 2.71
CBS-213	ENST00000478709	AMIGO3	Q86WK7	504 aa		31.99	■■■□□ 2.71
CBS-213	ENST00000478709	SYT17	Q9BSW7	474 aa		31.99	■■■□□ 2.71
CBS-213	ENST00000478709	RTCB	Q9Y3I0	505 aa	Known RBP	31.99	■■■□□ 2.71
CBS-213	ENST00000478709	ZNF831	Q5JPB2	1677 aa		31.97	■■■□□ 2.71
CBS-213	ENST00000478709	RC3H1	Q5TC82	1133 aa	Known RBP	31.97	■■■□□ 2.71
CBS-213	ENST00000478709	SMIM5	Q71RC9	77 aa		31.97	■■■□□ 2.71
CBS-213	ENST00000478709	CNTNAP4	Q9C0A0	1308 aa		31.97	■■■□□ 2.71
CBS-213	ENST00000478709	SLC39A6	Q13433	755 aa		31.96	■■■□□ 2.71
CBS-213	ENST00000478709	UBR3	Q6ZT12	1888 aa		31.95	■■■□□ 2.71
CBS-213	ENST00000478709	TTC5	Q8N0Z6	440 aa		31.95	■■■□□ 2.71
CBS-213	ENST00000478709	COL24A1	Q17RW2	1714 aa		31.95	■■■□□ 2.7
CBS-213	ENST00000478709	TRAPPC3L	Q5T215	181 aa		31.94	■■■□□ 2.7
CBS-213	ENST00000478709	IL17RE	Q8NFR9	667 aa		31.94	■■■□□ 2.7
CBS-213	ENST00000478709	ADAMTS7	Q9UKP4	1686 aa		31.93	■■■□□ 2.7
CBS-213	ENST00000478709	RTF1	Q92541	710 aa	Known RBP	31.93	■■■□□ 2.7
CBS-213	ENST00000478709	RPS6KA4	O75676	772 aa		31.9	■■■□□ 2.7
CBS-213	ENST00000478709	ADRA2B	P18089	450 aa		31.9	■■■□□ 2.7
CBS-213	ENST00000478709	CRKL	P46109	303 aa	Known RBP	31.9	■■■□□ 2.7
CBS-213	ENST00000478709	VIRMA	Q69YN4	1812 aa	Known RBP	31.89	■■■□□ 2.7
CBS-213	ENST00000478709	PNN	Q9H307	717 aa	Known RBP	31.89	■■■□□ 2.7
CBS-213	ENST00000478709	MYBBP1A	Q9BQG0	1328 aa	Known RBP	31.89	■■■□□ 2.7
CBS-213	ENST00000478709	COL5A3	P25940	1745 aa	Predicted RBP	31.89	■■■□□ 2.69
CBS-213	ENST00000478709	DNAJC10	Q8IXB1	793 aa		31.88	■■■□□ 2.69
CBS-213	ENST00000478709	RFC4	P35249	363 aa		31.87	■■■□□ 2.69
CBS-213	ENST00000478709	CEMIP	Q8WUJ3	1361 aa		31.86	■■■□□ 2.69
CBS-213	ENST00000478709	ARHGEF1	Q92888	912 aa	Known RBP	31.85	■■■□□ 2.69
CBS-213	ENST00000478709	MAPK8IP3	Q9UPT6	1336 aa		31.84	■■■□□ 2.69
CBS-213	ENST00000478709	ZNF790	Q6PG37	636 aa		31.84	■■■□□ 2.69
CBS-213	ENST00000478709	VSIG10	Q8N0Z9	540 aa		31.84	■■■□□ 2.69
CBS-213	ENST00000478709	KCP	Q6ZWJ8	1503 aa		31.84	■■■□□ 2.69
CBS-213	ENST00000478709	HTATSF1	O43719	755 aa	Known RBP	31.83	■■■□□ 2.69
CBS-213	ENST00000478709	MCM10	Q7L590	875 aa		31.83	■■■□□ 2.69
CBS-213	ENST00000478709	CCDC87	Q9NVE4	849 aa		31.83	■■■□□ 2.69
CBS-213	ENST00000478709	TJP1	Q07157	1748 aa		31.83	■■■□□ 2.69
CBS-213	ENST00000478709	BTBD11	A6QL63	1104 aa		31.82	■■■□□ 2.68
CBS-213	ENST00000478709	CIC	Q96RK0	1608 aa	Predicted RBP	31.82	■■■□□ 2.68
CBS-213	ENST00000478709	CYP19A1	P11511	503 aa	Predicted RBP	31.8	■■■□□ 2.68
CBS-213	ENST00000478709	INTS5	Q6P9B9	1019 aa	Known RBP	31.8	■■■□□ 2.68
CBS-213	ENST00000478709	NLGN1	Q8N2Q7	840 aa		31.8	■■■□□ 2.68
CBS-213	ENST00000478709	ZNF496	Q96IT1	587 aa	Predicted RBP	31.79	■■■□□ 2.68
CBS-213	ENST00000478709	STARD3NL	O95772	234 aa		31.78	■■■□□ 2.68
CBS-213	ENST00000478709	DCTN1	Q14203	1278 aa		31.78	■■■□□ 2.68
CBS-213	ENST00000478709	FMNL2	Q96PY5	1086 aa		31.78	■■■□□ 2.68
CBS-213	ENST00000478709	PLEKHF1	Q96S99	279 aa		31.78	■■■□□ 2.68
CBS-213	ENST00000478709	MMP10	P09238	476 aa		31.77	■■■□□ 2.68
CBS-213	ENST00000478709	NLGN2	Q8NFZ4	835 aa		31.77	■■■□□ 2.68
CBS-213	ENST00000478709	TEX13A	Q9BXU3	409 aa	Predicted RBP	31.77	■■■□□ 2.68
CBS-213	ENST00000478709	CD2AP	Q9Y5K6	639 aa		31.77	■■■□□ 2.68
CBS-213	ENST00000478709	GPR162	Q16538	588 aa		31.76	■■■□□ 2.67
CBS-213	ENST00000478709	HEG1	Q9ULI3	1381 aa		31.76	■■■□□ 2.67
CBS-213	ENST00000478709	NFE2L2	Q16236	605 aa		31.75	■■■□□ 2.67
CBS-213	ENST00000478709	PELP1	Q8IZL8	1130 aa	Known RBP	31.75	■■■□□ 2.67
CBS-213	ENST00000478709	PRKRIP1	Q9H875	184 aa	Predicted RBP	31.75	■■■□□ 2.67
CBS-213	ENST00000478709	MYH14	Q7Z406	1995 aa	Known RBP	31.75	■■■□□ 2.67
CBS-213	ENST00000478709	UBR2	Q8IWV8	1755 aa		31.74	■■■□□ 2.67
CBS-213	ENST00000478709	GYS1	P13807	737 aa		31.74	■■■□□ 2.67
CBS-213	ENST00000478709	SIPA1L3	O60292	1781 aa	Predicted RBP	31.73	■■■□□ 2.67
CBS-213	ENST00000478709	WDR43	Q15061	677 aa	Known RBP eCLIP	31.73	■■■□□ 2.67
CBS-213	ENST00000478709	ZBTB1	Q9Y2K1	713 aa		31.73	■■■□□ 2.67
CBS-213	ENST00000478709	SOS1	Q07889	1333 aa	Predicted RBP	31.73	■■■□□ 2.67
CBS-213	ENST00000478709	ZPR1	O75312	459 aa		31.72	■■■□□ 2.67
CBS-213	ENST00000478709	USP42	Q9H9J4	1324 aa	Known RBP	31.72	■■■□□ 2.67

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms