RNA–Protein interactions for RNA: ENST00000478696.5

GARNL3-214, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-214ENST00000478696 DEPDC4Q8N2C3 294 aa5.06□□□□□ -1.6
GARNL3-214ENST00000478696 RHBDD1Q8TEB9 315 aa5.06□□□□□ -1.6
GARNL3-214ENST00000478696 NANOS1Q8WY41 292 aaKnown RBP5.06□□□□□ -1.6
GARNL3-214ENST00000478696 SENP3-EIF4A1A0A087X0R7 540 aa5.05□□□□□ -1.6
GARNL3-214ENST00000478696 A0A1B0GTH6 734 aa5.05□□□□□ -1.6
GARNL3-214ENST00000478696 USP17L3A6NCW0 530 aa5.05□□□□□ -1.6
GARNL3-214ENST00000478696 USP17L4A6NCW7 530 aa5.05□□□□□ -1.6
GARNL3-214ENST00000478696 CSB-PGBD3P0DP91 1061 aa5.05□□□□□ -1.6
GARNL3-214ENST00000478696 SMTNP53814 917 aa5.05□□□□□ -1.6
GARNL3-214ENST00000478696 USP17L2Q6R6M4 530 aa5.05□□□□□ -1.6
GARNL3-214ENST00000478696 TBC1D9Q6ZT07 1266 aa5.05□□□□□ -1.6
GARNL3-214ENST00000478696 USP17L1Q7RTZ2 530 aa5.05□□□□□ -1.6
GARNL3-214ENST00000478696 PGBD3Q8N328 593 aa5.05□□□□□ -1.6
GARNL3-214ENST00000478696 VWA5B2Q8N398 1253 aa5.05□□□□□ -1.6
GARNL3-214ENST00000478696 ADAMTS19Q8TE59 1207 aa5.05□□□□□ -1.6
GARNL3-214ENST00000478696 MKRN1Q9UHC7 482 aaKnown RBP5.05□□□□□ -1.6
GARNL3-214ENST00000478696 ERBB4Q15303 1308 aa5.04□□□□□ -1.6
GARNL3-214ENST00000478696 F11P03951 625 aa5.04□□□□□ -1.6
GARNL3-214ENST00000478696 PHKA2P46019 1235 aa5.04□□□□□ -1.6
GARNL3-214ENST00000478696 PPARGC1BQ86YN6 1023 aaKnown RBP5.04□□□□□ -1.6
GARNL3-214ENST00000478696 TRERF1Q96PN7 1200 aa5.04□□□□□ -1.6
GARNL3-214ENST00000478696 NIFKQ9BYG3 293 aaKnown RBP5.04□□□□□ -1.6
GARNL3-214ENST00000478696 TFIP11Q9UBB9 837 aaKnown RBP5.04□□□□□ -1.6
GARNL3-214ENST00000478696 SERTAD1Q9UHV2 236 aa5.04□□□□□ -1.6
GARNL3-214ENST00000478696 ZNF777Q9ULD5 760 aaPredicted RBP5.04□□□□□ -1.6
GARNL3-214ENST00000478696 PCDHGA11Q9Y5H2 935 aa5.04□□□□□ -1.6
GARNL3-214ENST00000478696 HRH3Q9Y5N1 445 aa5.04□□□□□ -1.6
GARNL3-214ENST00000478696 PALM3A6NDB9 673 aaPredicted RBP5.03□□□□□ -1.6
GARNL3-214ENST00000478696 A6NJY4 79 aa5.03□□□□□ -1.6
GARNL3-214ENST00000478696 SCNN1DP51172 638 aa5.03□□□□□ -1.6
GARNL3-214ENST00000478696 LARP1Q6PKG0 1096 aaKnown RBP5.03□□□□□ -1.6
GARNL3-214ENST00000478696 TRIM22Q8IYM9 498 aa5.03□□□□□ -1.6
GARNL3-214ENST00000478696 LARGE2Q8N3Y3 721 aa5.03□□□□□ -1.6
GARNL3-214ENST00000478696 AIDAQ96BJ3 306 aa5.03□□□□□ -1.6
GARNL3-214ENST00000478696 SLC4A9Q96Q91 983 aa5.03□□□□□ -1.6
GARNL3-214ENST00000478696 UCN2Q96RP3 112 aa5.03□□□□□ -1.6
GARNL3-214ENST00000478696 PPP1R12CQ9BZL4 782 aa5.03□□□□□ -1.6
GARNL3-214ENST00000478696 FHDC1Q9C0D6 1143 aaPredicted RBP5.03□□□□□ -1.6
GARNL3-214ENST00000478696 ZMYND15Q9H091 742 aa5.03□□□□□ -1.6
GARNL3-214ENST00000478696 DNAAF2Q9NVR5 837 aaKnown RBP5.03□□□□□ -1.6
GARNL3-214ENST00000478696 CABP1Q9NZU7 370 aa5.03□□□□□ -1.6
GARNL3-214ENST00000478696 CHMP3Q9Y3E7 222 aa5.03□□□□□ -1.6
GARNL3-214ENST00000478696 TMEM229AB2RXF0 380 aa5.02□□□□□ -1.61
GARNL3-214ENST00000478696 CDK2AP1O14519 115 aa5.02□□□□□ -1.61
GARNL3-214ENST00000478696 STAU1O95793 577 aaKnown RBP5.02□□□□□ -1.61
GARNL3-214ENST00000478696 RASA1P20936 1047 aa5.02□□□□□ -1.61
GARNL3-214ENST00000478696 NBPF1Q3BBV0 1214 aa5.02□□□□□ -1.61
GARNL3-214ENST00000478696 C4orf17Q53FE4 359 aa5.02□□□□□ -1.61
GARNL3-214ENST00000478696 EFHC2Q5JST6 749 aa5.02□□□□□ -1.61
GARNL3-214ENST00000478696 CCDC102BQ68D86 513 aa5.02□□□□□ -1.61
GARNL3-214ENST00000478696 OGFOD1Q8N543 542 aa5.02□□□□□ -1.61
GARNL3-214ENST00000478696 ZSCAN1Q8NBB4 408 aa5.02□□□□□ -1.61
GARNL3-214ENST00000478696 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.02□□□□□ -1.61
GARNL3-214ENST00000478696 TPCN2Q8NHX9 752 aa5.02□□□□□ -1.61
GARNL3-214ENST00000478696 COL25A1Q9BXS0 654 aaPredicted RBP5.02□□□□□ -1.61
GARNL3-214ENST00000478696 NUCKS1Q9H1E3 243 aaKnown RBP5.02□□□□□ -1.61
GARNL3-214ENST00000478696 TATP17735 454 aaPredicted RBP5.01□□□□□ -1.61
GARNL3-214ENST00000478696 LMOD1P29536 600 aaPredicted RBP5.01□□□□□ -1.61
GARNL3-214ENST00000478696 PLA2G4AP47712 749 aa5.01□□□□□ -1.61
GARNL3-214ENST00000478696 LBRQ14739 615 aaKnown RBP5.01□□□□□ -1.61
GARNL3-214ENST00000478696 C1orf216Q8TAB5 229 aa5.01□□□□□ -1.61
GARNL3-214ENST00000478696 CNTNAP3BQ96NU0 1288 aa5.01□□□□□ -1.61
GARNL3-214ENST00000478696 CNTNAP3Q9BZ76 1288 aa5.01□□□□□ -1.61
GARNL3-214ENST00000478696 VRTNQ9H8Y1 702 aa5.01□□□□□ -1.61
GARNL3-214ENST00000478696 GPAMQ9HCL2 828 aa5.01□□□□□ -1.61
GARNL3-214ENST00000478696 ZNF358Q9NW07 568 aa5.01□□□□□ -1.61
GARNL3-214ENST00000478696 STK17AQ9UEE5 414 aa5.01□□□□□ -1.61
GARNL3-214ENST00000478696 NSFL1CQ9UNZ2 370 aaKnown RBP5.01□□□□□ -1.61
GARNL3-214ENST00000478696 PHF24Q9UPV7 400 aa5.01□□□□□ -1.61
GARNL3-214ENST00000478696 MAFBQ9Y5Q3 323 aaPredicted RBP5.01□□□□□ -1.61
GARNL3-214ENST00000478696 MTFR1Q15390 333 aa5□□□□□ -1.61
GARNL3-214ENST00000478696 DBN1Q16643 649 aa5□□□□□ -1.61
GARNL3-214ENST00000478696 GPR161Q8N6U8 529 aaKnown RBP5□□□□□ -1.61
GARNL3-214ENST00000478696 ZNF837Q96EG3 531 aaPredicted RBP5□□□□□ -1.61
GARNL3-214ENST00000478696 ZNF594Q96JF6 807 aaPredicted RBP5□□□□□ -1.61
GARNL3-214ENST00000478696 M0R2N6 131 aa4.99□□□□□ -1.61
GARNL3-214ENST00000478696 ZBTB7BO15156 539 aaPredicted RBP4.99□□□□□ -1.61
GARNL3-214ENST00000478696 MSX1P28360 303 aa4.99□□□□□ -1.61
GARNL3-214ENST00000478696 CLDN10P78369 228 aa4.99□□□□□ -1.61
GARNL3-214ENST00000478696 ARSJQ5FYB0 599 aaPredicted RBP4.99□□□□□ -1.61
GARNL3-214ENST00000478696 LCE2CQ5TA81 110 aa4.99□□□□□ -1.61
GARNL3-214ENST00000478696 FIGNL1Q6PIW4 674 aa4.99□□□□□ -1.61
GARNL3-214ENST00000478696 BICDL1Q6ZP65 573 aa4.99□□□□□ -1.61
GARNL3-214ENST00000478696 SIX5Q8N196 739 aa4.99□□□□□ -1.61
GARNL3-214ENST00000478696 GTPBP3Q969Y2 492 aaKnown RBP4.99□□□□□ -1.61
GARNL3-214ENST00000478696 NEUROD4Q9HD90 331 aa4.99□□□□□ -1.61
GARNL3-214ENST00000478696 SCHIP1Q9P0W5 487 aaPredicted RBP4.99□□□□□ -1.61
GARNL3-214ENST00000478696 ZNF232Q9UNY5 417 aa4.99□□□□□ -1.61
GARNL3-214ENST00000478696 GJA3Q9Y6H8 435 aa4.99□□□□□ -1.61
GARNL3-214ENST00000478696 RFX1P22670 979 aa4.98□□□□□ -1.61
GARNL3-214ENST00000478696 SEC13P55735 322 aa4.98□□□□□ -1.61
GARNL3-214ENST00000478696 ERICH6Q7L0X2 663 aa4.98□□□□□ -1.61
GARNL3-214ENST00000478696 TNS4Q8IZW8 715 aa4.98□□□□□ -1.61
GARNL3-214ENST00000478696 CCDC97Q96F63 343 aaPredicted RBP4.98□□□□□ -1.61
GARNL3-214ENST00000478696 HINFPQ9BQA5 517 aa4.98□□□□□ -1.61
GARNL3-214ENST00000478696 RUBCNLQ9H714 662 aa4.98□□□□□ -1.61
GARNL3-214ENST00000478696 MBIPQ9NS73 344 aa4.98□□□□□ -1.61
GARNL3-214ENST00000478696 CUEDC1Q9NWM3 386 aaPredicted RBP4.98□□□□□ -1.61
GARNL3-214ENST00000478696 ZDHHC3Q9NYG2 299 aa4.98□□□□□ -1.61
GARNL3-214ENST00000478696 SERTM1A2A2V5 107 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms