RNA–Protein interactions for RNA: ENST00000478677.1

AGRN-207, Transcript of agrin, humanhuman

TSL 2

Gene AGRN, Length 276 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-207ENST00000478677 GPBP1L1Q9HC44 474 aaPredicted RBP17.05■□□□□ 0.32
AGRN-207ENST00000478677 ATG3Q9NT62 314 aa17.05■□□□□ 0.32
AGRN-207ENST00000478677 WASHC2AQ641Q2 1341 aa17.04■□□□□ 0.32
AGRN-207ENST00000478677 TJP1Q07157 1748 aa17.04■□□□□ 0.32
AGRN-207ENST00000478677 PHKG2P15735 406 aa17.03■□□□□ 0.32
AGRN-207ENST00000478677 KCNA3P22001 575 aa17.03■□□□□ 0.32
AGRN-207ENST00000478677 AK7Q96M32 723 aa17.02■□□□□ 0.32
AGRN-207ENST00000478677 POLKQ9UBT6 870 aa17.02■□□□□ 0.32
AGRN-207ENST00000478677 SMARCC1Q92922 1105 aaPredicted RBP17.01■□□□□ 0.31
AGRN-207ENST00000478677 ARFGEF1Q9Y6D6 1849 aa17■□□□□ 0.31
AGRN-207ENST00000478677 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17■□□□□ 0.31
AGRN-207ENST00000478677 WDR90Q96KV7 1748 aa16.99■□□□□ 0.31
AGRN-207ENST00000478677 GNPATO15228 680 aa16.99■□□□□ 0.31
AGRN-207ENST00000478677 MMP10P09238 476 aa16.99■□□□□ 0.31
AGRN-207ENST00000478677 GYS1P13807 737 aa16.97■□□□□ 0.31
AGRN-207ENST00000478677 TMF1P82094 1093 aa16.97■□□□□ 0.31
AGRN-207ENST00000478677 EIF4A2Q14240 407 aaKnown RBP16.97■□□□□ 0.31
AGRN-207ENST00000478677 NMRK2Q9NPI5 230 aa16.97■□□□□ 0.31
AGRN-207ENST00000478677 PLEKHG2Q9H7P9 1386 aa16.97■□□□□ 0.31
AGRN-207ENST00000478677 A0A0G2JLW4 131 aa16.96■□□□□ 0.31
AGRN-207ENST00000478677 ATP6V1AP38606 617 aa16.95■□□□□ 0.3
AGRN-207ENST00000478677 ARHGEF1Q92888 912 aaKnown RBP16.95■□□□□ 0.3
AGRN-207ENST00000478677 DPEP1P16444 411 aa16.94■□□□□ 0.3
AGRN-207ENST00000478677 PRELPP51888 382 aa16.94■□□□□ 0.3
AGRN-207ENST00000478677 DDR1Q08345 913 aa16.94■□□□□ 0.3
AGRN-207ENST00000478677 TMOD3Q9NYL9 352 aa16.94■□□□□ 0.3
AGRN-207ENST00000478677 CNTNAP4Q9C0A0 1308 aa16.94■□□□□ 0.3
AGRN-207ENST00000478677 NRXN2Q9P2S2 1712 aa16.93■□□□□ 0.3
AGRN-207ENST00000478677 SBF1O95248 1867 aa16.93■□□□□ 0.3
AGRN-207ENST00000478677 HTRA3P83110 453 aa16.93■□□□□ 0.3
AGRN-207ENST00000478677 SPG7Q9UQ90 795 aa16.93■□□□□ 0.3
AGRN-207ENST00000478677 IFNL2Q8IZJ0 200 aa16.92■□□□□ 0.3
AGRN-207ENST00000478677 TGFB2P61812 414 aa16.91■□□□□ 0.3
AGRN-207ENST00000478677 RC3H1Q5TC82 1133 aaKnown RBP16.91■□□□□ 0.3
AGRN-207ENST00000478677 KCPQ6ZWJ8 1503 aa16.91■□□□□ 0.3
AGRN-207ENST00000478677 SLC24A1O60721 1099 aa16.9■□□□□ 0.3
AGRN-207ENST00000478677 AEBP1Q8IUX7 1158 aa16.9■□□□□ 0.3
AGRN-207ENST00000478677 SCN11AQ9UI33 1791 aa16.89■□□□□ 0.3
AGRN-207ENST00000478677 DLEC1Q9Y238 1755 aa16.89■□□□□ 0.3
AGRN-207ENST00000478677 RPS6KA4O75676 772 aa16.89■□□□□ 0.29
AGRN-207ENST00000478677 TOMM70O94826 608 aa16.89■□□□□ 0.29
AGRN-207ENST00000478677 DCAF5Q96JK2 942 aa16.89■□□□□ 0.29
AGRN-207ENST00000478677 SRP68Q9UHB9 627 aaKnown RBP16.89■□□□□ 0.29
AGRN-207ENST00000478677 MRC1P22897 1456 aa16.88■□□□□ 0.29
AGRN-207ENST00000478677 FKBP8Q14318 412 aa16.88■□□□□ 0.29
AGRN-207ENST00000478677 BCS1LQ9Y276 419 aa16.88■□□□□ 0.29
AGRN-207ENST00000478677 AFDNP55196 1824 aaKnown RBP16.88■□□□□ 0.29
AGRN-207ENST00000478677 ERVV-2B6SEH9 535 aa16.87■□□□□ 0.29
AGRN-207ENST00000478677 PPM1GO15355 546 aaPredicted RBP16.87■□□□□ 0.29
AGRN-207ENST00000478677 APLP1P51693 650 aa16.87■□□□□ 0.29
AGRN-207ENST00000478677 INTS5Q6P9B9 1019 aaKnown RBP16.87■□□□□ 0.29
AGRN-207ENST00000478677 JMYQ8N9B5 988 aa16.87■□□□□ 0.29
AGRN-207ENST00000478677 USP42Q9H9J4 1324 aaKnown RBP16.87■□□□□ 0.29
AGRN-207ENST00000478677 TNRC6CQ9HCJ0 1690 aaKnown RBP16.86■□□□□ 0.29
AGRN-207ENST00000478677 ADRA2BP18089 450 aa16.86■□□□□ 0.29
AGRN-207ENST00000478677 TRAPPC3LQ5T215 181 aa16.86■□□□□ 0.29
AGRN-207ENST00000478677 NLGN1Q8N2Q7 840 aa16.86■□□□□ 0.29
AGRN-207ENST00000478677 RTCBQ9Y3I0 505 aaKnown RBP16.86■□□□□ 0.29
AGRN-207ENST00000478677 TM4SF1P30408 202 aa16.85■□□□□ 0.29
AGRN-207ENST00000478677 C9orf131Q5VYM1 1079 aa16.85■□□□□ 0.29
AGRN-207ENST00000478677 CHRNA5P30532 468 aa16.84■□□□□ 0.29
AGRN-207ENST00000478677 BCL2L12Q9HB09 334 aa16.84■□□□□ 0.29
AGRN-207ENST00000478677 UBR2Q8IWV8 1755 aa16.84■□□□□ 0.29
AGRN-207ENST00000478677 POLRMTO00411 1230 aaKnown RBP16.83■□□□□ 0.28
AGRN-207ENST00000478677 CRKLP46109 303 aaKnown RBP16.83■□□□□ 0.28
AGRN-207ENST00000478677 COL13A1Q5TAT6 717 aaPredicted RBP16.83■□□□□ 0.28
AGRN-207ENST00000478677 CARMIL3Q8ND23 1372 aa16.83■□□□□ 0.28
AGRN-207ENST00000478677 RBM46Q8TBY0 533 aaKnown RBP16.83■□□□□ 0.28
AGRN-207ENST00000478677 ANKRD31Q8N7Z5 1873 aa16.82■□□□□ 0.28
AGRN-207ENST00000478677 VIRMAQ69YN4 1812 aaKnown RBP16.82■□□□□ 0.28
AGRN-207ENST00000478677 HMGB2P26583 209 aaKnown RBP16.82■□□□□ 0.28
AGRN-207ENST00000478677 ARHGAP27Q6ZUM4 889 aa16.82■□□□□ 0.28
AGRN-207ENST00000478677 RBM42Q9BTD8 480 aaKnown RBP16.82■□□□□ 0.28
AGRN-207ENST00000478677 COL11A2P13942 1736 aaPredicted RBP16.82■□□□□ 0.28
AGRN-207ENST00000478677 TIAM2Q8IVF5 1701 aa16.82■□□□□ 0.28
AGRN-207ENST00000478677 FCHSD2O94868 740 aa16.81■□□□□ 0.28
AGRN-207ENST00000478677 POTECB2RU33 542 aa16.8■□□□□ 0.28
AGRN-207ENST00000478677 TNNT2P45379 298 aaPredicted RBP16.8■□□□□ 0.28
AGRN-207ENST00000478677 CDCA8Q53HL2 280 aa16.8■□□□□ 0.28
AGRN-207ENST00000478677 KLRG1Q96E93 195 aa16.8■□□□□ 0.28
AGRN-207ENST00000478677 CCDC87Q9NVE4 849 aa16.8■□□□□ 0.28
AGRN-207ENST00000478677 SOS1Q07889 1333 aaPredicted RBP16.79■□□□□ 0.28
AGRN-207ENST00000478677 ZNF530Q6P9A1 599 aaPredicted RBP16.79■□□□□ 0.28
AGRN-207ENST00000478677 NFATC2IPQ8NCF5 419 aa16.79■□□□□ 0.28
AGRN-207ENST00000478677 PTCD1O75127 700 aaKnown RBP16.78■□□□□ 0.28
AGRN-207ENST00000478677 IL13P35225 146 aa16.78■□□□□ 0.28
AGRN-207ENST00000478677 RASSF7Q02833 373 aa16.78■□□□□ 0.28
AGRN-207ENST00000478677 RFC4P35249 363 aa16.77■□□□□ 0.28
AGRN-207ENST00000478677 DNAJC10Q8IXB1 793 aa16.77■□□□□ 0.28
AGRN-207ENST00000478677 LGR6Q9HBX8 967 aa16.76■□□□□ 0.27
AGRN-207ENST00000478677 PIM2Q9P1W9 311 aa16.76■□□□□ 0.27
AGRN-207ENST00000478677 PARP3Q9Y6F1 533 aa16.76■□□□□ 0.27
AGRN-207ENST00000478677 SCN7AQ01118 1682 aa16.75■□□□□ 0.27
AGRN-207ENST00000478677 SIPA1L3O60292 1781 aaPredicted RBP16.75■□□□□ 0.27
AGRN-207ENST00000478677 NFKBIEO00221 500 aa16.75■□□□□ 0.27
AGRN-207ENST00000478677 CYP19A1P11511 503 aaPredicted RBP16.75■□□□□ 0.27
AGRN-207ENST00000478677 NFIXQ14938 502 aa16.75■□□□□ 0.27
AGRN-207ENST00000478677 RRAGCQ9HB90 399 aa16.75■□□□□ 0.27
AGRN-207ENST00000478677 RNF181Q9P0P0 153 aa16.75■□□□□ 0.27
AGRN-207ENST00000478677 CABP4P57796 275 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms