RNA–Protein interactions for RNA: ENST00000478527.1

SDK1-207, Transcript of sidekick cell adhesion molecule 1, humanhuman

TSL 3

Gene SDK1, Length 494 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDK1-207ENST00000478527 ATG3Q9NT62 314 aa21.21■□□□□ 0.99
SDK1-207ENST00000478527 TFCP2L1Q9NZI6 479 aa21.21■□□□□ 0.99
SDK1-207ENST00000478527 MYH14Q7Z406 1995 aaKnown RBP21.21■□□□□ 0.99
SDK1-207ENST00000478527 AKAP4Q5JQC9 854 aa21.2■□□□□ 0.98
SDK1-207ENST00000478527 PPP1R1BQ9UD71 204 aaPredicted RBP21.2■□□□□ 0.98
SDK1-207ENST00000478527 SGIP1Q9BQI5 828 aa21.19■□□□□ 0.98
SDK1-207ENST00000478527 ATF5Q9Y2D1 282 aaPredicted RBP21.19■□□□□ 0.98
SDK1-207ENST00000478527 DLG5Q8TDM6 1919 aa21.19■□□□□ 0.98
SDK1-207ENST00000478527 CABP4P57796 275 aa21.18■□□□□ 0.98
SDK1-207ENST00000478527 MTHFSDQ2M296 383 aaKnown RBP21.18■□□□□ 0.98
SDK1-207ENST00000478527 ITPK1Q13572 414 aa21.17■□□□□ 0.98
SDK1-207ENST00000478527 LINC00116Q8NCU8 138 aa21.17■□□□□ 0.98
SDK1-207ENST00000478527 MAP3K5Q99683 1374 aa21.17■□□□□ 0.98
SDK1-207ENST00000478527 KCPQ6ZWJ8 1503 aa21.17■□□□□ 0.98
SDK1-207ENST00000478527 RSPH6AQ9H0K4 717 aa21.16■□□□□ 0.98
SDK1-207ENST00000478527 HMGB2P26583 209 aaKnown RBP21.15■□□□□ 0.98
SDK1-207ENST00000478527 SLC16A10Q8TF71 515 aa21.15■□□□□ 0.98
SDK1-207ENST00000478527 AK7Q96M32 723 aa21.15■□□□□ 0.98
SDK1-207ENST00000478527 PRKAR2BP31323 418 aa21.14■□□□□ 0.97
SDK1-207ENST00000478527 AMIGO3Q86WK7 504 aa21.14■□□□□ 0.97
SDK1-207ENST00000478527 RNMTO43148 476 aaKnown RBP21.13■□□□□ 0.97
SDK1-207ENST00000478527 ATP6V1AP38606 617 aa21.13■□□□□ 0.97
SDK1-207ENST00000478527 COL23A1Q86Y22 540 aaPredicted RBP21.13■□□□□ 0.97
SDK1-207ENST00000478527 GAS2L2Q8NHY3 880 aa21.13■□□□□ 0.97
SDK1-207ENST00000478527 SLC4A9Q96Q91 983 aa21.13■□□□□ 0.97
SDK1-207ENST00000478527 SLC52A2Q9HAB3 445 aa21.13■□□□□ 0.97
SDK1-207ENST00000478527 NUDCQ9Y266 331 aa21.13■□□□□ 0.97
SDK1-207ENST00000478527 DDX10Q13206 875 aaKnown RBP21.12■□□□□ 0.97
SDK1-207ENST00000478527 NFATC2IPQ8NCF5 419 aa21.12■□□□□ 0.97
SDK1-207ENST00000478527 U2AF1L5P0DN76 240 aaPredicted RBP21.11■□□□□ 0.97
SDK1-207ENST00000478527 ZEB1P37275 1124 aaPredicted RBP21.11■□□□□ 0.97
SDK1-207ENST00000478527 U2AF1Q01081 240 aaKnown RBP eCLIP21.11■□□□□ 0.97
SDK1-207ENST00000478527 RBM42Q9BTD8 480 aaKnown RBP21.11■□□□□ 0.97
SDK1-207ENST00000478527 LGR6Q9HBX8 967 aa21.11■□□□□ 0.97
SDK1-207ENST00000478527 CNTNAP4Q9C0A0 1308 aa21.09■□□□□ 0.97
SDK1-207ENST00000478527 GNPATO15228 680 aa21.09■□□□□ 0.97
SDK1-207ENST00000478527 MSH5O43196 834 aa21.09■□□□□ 0.97
SDK1-207ENST00000478527 PHF14O94880 888 aa21.09■□□□□ 0.97
SDK1-207ENST00000478527 FLAD1Q8NFF5 587 aa21.09■□□□□ 0.97
SDK1-207ENST00000478527 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.08■□□□□ 0.97
SDK1-207ENST00000478527 SSFA2P28290 1259 aa21.08■□□□□ 0.97
SDK1-207ENST00000478527 PHACTR3Q96KR7 559 aa21.08■□□□□ 0.97
SDK1-207ENST00000478527 ARXQ96QS3 562 aa21.08■□□□□ 0.97
SDK1-207ENST00000478527 FHDC1Q9C0D6 1143 aaPredicted RBP21.08■□□□□ 0.97
SDK1-207ENST00000478527 CEMIPQ8WUJ3 1361 aa21.08■□□□□ 0.96
SDK1-207ENST00000478527 PTCD1O75127 700 aaKnown RBP21.07■□□□□ 0.96
SDK1-207ENST00000478527 RALBP1Q15311 655 aa21.07■□□□□ 0.96
SDK1-207ENST00000478527 MSL1Q68DK7 614 aa21.07■□□□□ 0.96
SDK1-207ENST00000478527 SMIM5Q71RC9 77 aa21.07■□□□□ 0.96
SDK1-207ENST00000478527 GNAT3A8MTJ3 354 aa21.06■□□□□ 0.96
SDK1-207ENST00000478527 POLD1P28340 1107 aa21.06■□□□□ 0.96
SDK1-207ENST00000478527 FCHSD2O94868 740 aa21.05■□□□□ 0.96
SDK1-207ENST00000478527 SLC39A6Q13433 755 aa21.04■□□□□ 0.96
SDK1-207ENST00000478527 KDM3BQ7LBC6 1761 aa21.04■□□□□ 0.96
SDK1-207ENST00000478527 MYBBP1AQ9BQG0 1328 aaKnown RBP21.04■□□□□ 0.96
SDK1-207ENST00000478527 KIF13BQ9NQT8 1826 aa21.03■□□□□ 0.96
SDK1-207ENST00000478527 LAMB4A4D0S4 1761 aa21.02■□□□□ 0.96
SDK1-207ENST00000478527 IL17REQ8NFR9 667 aa21.02■□□□□ 0.96
SDK1-207ENST00000478527 SYT17Q9BSW7 474 aa21.02■□□□□ 0.96
SDK1-207ENST00000478527 CRKLP46109 303 aaKnown RBP21.01■□□□□ 0.95
SDK1-207ENST00000478527 TEFQ10587 303 aa21.01■□□□□ 0.95
SDK1-207ENST00000478527 RC3H1Q5TC82 1133 aaKnown RBP21.01■□□□□ 0.95
SDK1-207ENST00000478527 SCN7AQ01118 1682 aa21.01■□□□□ 0.95
SDK1-207ENST00000478527 CHD4Q14839 1912 aa21■□□□□ 0.95
SDK1-207ENST00000478527 RTCBQ9Y3I0 505 aaKnown RBP21■□□□□ 0.95
SDK1-207ENST00000478527 KIAA1551Q9HCM1 1747 aa20.99■□□□□ 0.95
SDK1-207ENST00000478527 ADRA2BP18089 450 aa20.99■□□□□ 0.95
SDK1-207ENST00000478527 DNAJC10Q8IXB1 793 aa20.99■□□□□ 0.95
SDK1-207ENST00000478527 KLHL34Q8N239 644 aa20.99■□□□□ 0.95
SDK1-207ENST00000478527 RPS6KA4O75676 772 aa20.97■□□□□ 0.95
SDK1-207ENST00000478527 BCORQ6W2J9 1755 aa20.96■□□□□ 0.95
SDK1-207ENST00000478527 TTC5Q8N0Z6 440 aa20.96■□□□□ 0.95
SDK1-207ENST00000478527 PLEKHF1Q96S99 279 aa20.96■□□□□ 0.95
SDK1-207ENST00000478527 HEG1Q9ULI3 1381 aa20.96■□□□□ 0.95
SDK1-207ENST00000478527 MCM10Q7L590 875 aa20.95■□□□□ 0.94
SDK1-207ENST00000478527 CCDC87Q9NVE4 849 aa20.95■□□□□ 0.94
SDK1-207ENST00000478527 TRAPPC3LQ5T215 181 aa20.94■□□□□ 0.94
SDK1-207ENST00000478527 INTS5Q6P9B9 1019 aaKnown RBP20.94■□□□□ 0.94
SDK1-207ENST00000478527 ZNF790Q6PG37 636 aa20.94■□□□□ 0.94
SDK1-207ENST00000478527 VSIG10Q8N0Z9 540 aa20.94■□□□□ 0.94
SDK1-207ENST00000478527 RTF1Q92541 710 aaKnown RBP20.94■□□□□ 0.94
SDK1-207ENST00000478527 ZNF496Q96IT1 587 aaPredicted RBP20.94■□□□□ 0.94
SDK1-207ENST00000478527 PRKRIP1Q9H875 184 aaPredicted RBP20.94■□□□□ 0.94
SDK1-207ENST00000478527 SOS1Q07889 1333 aaPredicted RBP20.94■□□□□ 0.94
SDK1-207ENST00000478527 NEFMP07197 916 aa20.93■□□□□ 0.94
SDK1-207ENST00000478527 CYP19A1P11511 503 aaPredicted RBP20.93■□□□□ 0.94
SDK1-207ENST00000478527 NLGN2Q8NFZ4 835 aa20.93■□□□□ 0.94
SDK1-207ENST00000478527 ARHGEF1Q92888 912 aaKnown RBP20.93■□□□□ 0.94
SDK1-207ENST00000478527 MAPK8IP3Q9UPT6 1336 aa20.93■□□□□ 0.94
SDK1-207ENST00000478527 COL15A1P39059 1388 aa20.93■□□□□ 0.94
SDK1-207ENST00000478527 AFDNP55196 1824 aaKnown RBP20.92■□□□□ 0.94
SDK1-207ENST00000478527 BRCA1P38398 1863 aaKnown RBP20.92■□□□□ 0.94
SDK1-207ENST00000478527 DCTN1Q14203 1278 aa20.92■□□□□ 0.94
SDK1-207ENST00000478527 ZBTB1Q9Y2K1 713 aa20.92■□□□□ 0.94
SDK1-207ENST00000478527 USP42Q9H9J4 1324 aaKnown RBP20.92■□□□□ 0.94
SDK1-207ENST00000478527 N4BP2Q86UW6 1770 aaPredicted RBP20.92■□□□□ 0.94
SDK1-207ENST00000478527 HTATSF1O43719 755 aaKnown RBP20.91■□□□□ 0.94
SDK1-207ENST00000478527 NFE2L2Q16236 605 aa20.91■□□□□ 0.94
SDK1-207ENST00000478527 C10orf71Q711Q0 1435 aa20.91■□□□□ 0.94
SDK1-207ENST00000478527 DCAF8L1A6NGE4 600 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms