RNA–Protein interactions for RNA: ENST00000478462.5

MSL3-214, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 549 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-214ENST00000478462 MARCH10Q8NA82 808 aaPredicted RBP10.12□□□□□ -0.79
MSL3-214ENST00000478462 PLSCR2Q9NRY7 297 aa10.12□□□□□ -0.79
MSL3-214ENST00000478462 TNS2Q63HR2 1409 aa10.12□□□□□ -0.79
MSL3-214ENST00000478462 PKD1L3Q7Z443 1732 aa10.12□□□□□ -0.79
MSL3-214ENST00000478462 PCDH11XQ9BZA7 1347 aa10.11□□□□□ -0.79
MSL3-214ENST00000478462 PCDH11YQ9BZA8 1340 aa10.11□□□□□ -0.79
MSL3-214ENST00000478462 SHANK3Q9BYB0 1731 aa10.11□□□□□ -0.79
MSL3-214ENST00000478462 GSE1Q14687 1217 aa10.11□□□□□ -0.79
MSL3-214ENST00000478462 CCDC184Q52MB2 194 aa10.11□□□□□ -0.79
MSL3-214ENST00000478462 BBXQ8WY36 941 aaPredicted RBP10.11□□□□□ -0.79
MSL3-214ENST00000478462 RSPH6AQ9H0K4 717 aa10.11□□□□□ -0.79
MSL3-214ENST00000478462 VIRMAQ69YN4 1812 aaKnown RBP10.11□□□□□ -0.79
MSL3-214ENST00000478462 SBF2Q86WG5 1849 aa10.11□□□□□ -0.79
MSL3-214ENST00000478462 C1orf141Q5JVX7 400 aa10.1□□□□□ -0.79
MSL3-214ENST00000478462 ZNF530Q6P9A1 599 aaPredicted RBP10.1□□□□□ -0.79
MSL3-214ENST00000478462 IFNL2Q8IZJ0 200 aa10.1□□□□□ -0.79
MSL3-214ENST00000478462 PLEKHG2Q9H7P9 1386 aa10.1□□□□□ -0.79
MSL3-214ENST00000478462 EP400Q96L91 3159 aa10.1□□□□□ -0.79
MSL3-214ENST00000478462 MAPK8IP3Q9UPT6 1336 aa10.09□□□□□ -0.79
MSL3-214ENST00000478462 CYP27B1O15528 508 aa10.09□□□□□ -0.79
MSL3-214ENST00000478462 RASEFQ8IZ41 740 aa10.09□□□□□ -0.79
MSL3-214ENST00000478462 PHACTR3Q96KR7 559 aa10.09□□□□□ -0.79
MSL3-214ENST00000478462 TSPYL2Q9H2G4 693 aaPredicted RBP10.09□□□□□ -0.79
MSL3-214ENST00000478462 ADAMTS8Q9UP79 889 aa10.09□□□□□ -0.79
MSL3-214ENST00000478462 DLG5Q8TDM6 1919 aa10.08□□□□□ -0.8
MSL3-214ENST00000478462 TRIM37O94972 964 aa10.08□□□□□ -0.8
MSL3-214ENST00000478462 HSP90AB1P08238 724 aaKnown RBP10.08□□□□□ -0.8
MSL3-214ENST00000478462 PHKG2P15735 406 aa10.08□□□□□ -0.8
MSL3-214ENST00000478462 SF3B2Q13435 895 aaKnown RBP10.08□□□□□ -0.8
MSL3-214ENST00000478462 MTHFSDQ2M296 383 aaKnown RBP10.08□□□□□ -0.8
MSL3-214ENST00000478462 GAS2L2Q8NHY3 880 aa10.08□□□□□ -0.8
MSL3-214ENST00000478462 PNISRQ8TF01 805 aaKnown RBP10.08□□□□□ -0.8
MSL3-214ENST00000478462 ITGB4P16144 1822 aa10.07□□□□□ -0.8
MSL3-214ENST00000478462 CCER2I3L3R5 266 aa10.07□□□□□ -0.8
MSL3-214ENST00000478462 AKAP4Q5JQC9 854 aa10.07□□□□□ -0.8
MSL3-214ENST00000478462 CCDC146Q8IYE0 955 aa10.07□□□□□ -0.8
MSL3-214ENST00000478462 SYTL4Q96C24 671 aaPredicted RBP10.07□□□□□ -0.8
MSL3-214ENST00000478462 ACSBG1Q96GR2 724 aa10.07□□□□□ -0.8
MSL3-214ENST00000478462 PRIM1P49642 420 aaKnown RBP10.06□□□□□ -0.8
MSL3-214ENST00000478462 NKX1-1Q15270 411 aaPredicted RBP10.06□□□□□ -0.8
MSL3-214ENST00000478462 MPRIPQ6WCQ1 1025 aa10.06□□□□□ -0.8
MSL3-214ENST00000478462 CCDC125Q86Z20 511 aa10.06□□□□□ -0.8
MSL3-214ENST00000478462 FAM9BQ8IZU0 186 aa10.06□□□□□ -0.8
MSL3-214ENST00000478462 RUNDC1Q96C34 613 aa10.06□□□□□ -0.8
MSL3-214ENST00000478462 DCAF5Q96JK2 942 aa10.06□□□□□ -0.8
MSL3-214ENST00000478462 PLEKHF1Q96S99 279 aa10.06□□□□□ -0.8
MSL3-214ENST00000478462 DOT1LQ8TEK3 1739 aa10.06□□□□□ -0.8
MSL3-214ENST00000478462 BCL9O00512 1426 aa10.06□□□□□ -0.8
MSL3-214ENST00000478462 SCN11AQ9UI33 1791 aa10.06□□□□□ -0.8
MSL3-214ENST00000478462 GNAT3A8MTJ3 354 aa10.05□□□□□ -0.8
MSL3-214ENST00000478462 RTF1Q92541 710 aaKnown RBP10.05□□□□□ -0.8
MSL3-214ENST00000478462 UPF1Q92900 1129 aaKnown RBP eCLIP10.05□□□□□ -0.8
MSL3-214ENST00000478462 BCL11BQ9C0K0 894 aaPredicted RBP10.05□□□□□ -0.8
MSL3-214ENST00000478462 KCNQ2O43526 872 aa10.04□□□□□ -0.8
MSL3-214ENST00000478462 CABP4P57796 275 aa10.04□□□□□ -0.8
MSL3-214ENST00000478462 NFE2L2Q16236 605 aa10.04□□□□□ -0.8
MSL3-214ENST00000478462 PAXIP1Q6ZW49 1069 aaPredicted RBP10.04□□□□□ -0.8
MSL3-214ENST00000478462 BTAF1O14981 1849 aa10.04□□□□□ -0.8
MSL3-214ENST00000478462 MAP3K5Q99683 1374 aa10.03□□□□□ -0.8
MSL3-214ENST00000478462 NHSQ6T4R5 1651 aa10.03□□□□□ -0.8
MSL3-214ENST00000478462 ERVV-2B6SEH9 535 aa10.03□□□□□ -0.8
MSL3-214ENST00000478462 SOCS7O14512 581 aa10.03□□□□□ -0.8
MSL3-214ENST00000478462 APBA3O96018 575 aa10.03□□□□□ -0.8
MSL3-214ENST00000478462 RIPK4P57078 832 aa10.03□□□□□ -0.8
MSL3-214ENST00000478462 NEUROD2Q15784 382 aa10.03□□□□□ -0.8
MSL3-214ENST00000478462 ZNF579Q8NAF0 562 aaKnown RBP10.03□□□□□ -0.8
MSL3-214ENST00000478462 CFAP44Q96MT7 982 aa10.03□□□□□ -0.8
MSL3-214ENST00000478462 LGR6Q9HBX8 967 aa10.03□□□□□ -0.8
MSL3-214ENST00000478462 TMOD3Q9NYL9 352 aa10.03□□□□□ -0.8
MSL3-214ENST00000478462 TOGARAM1Q9Y4F4 1720 aa10.02□□□□□ -0.8
MSL3-214ENST00000478462 APAF1O14727 1248 aa10.02□□□□□ -0.81
MSL3-214ENST00000478462 RNMTO43148 476 aaKnown RBP10.02□□□□□ -0.81
MSL3-214ENST00000478462 HTATSF1O43719 755 aaKnown RBP10.02□□□□□ -0.81
MSL3-214ENST00000478462 TMPOP42166 694 aaKnown RBP10.02□□□□□ -0.81
MSL3-214ENST00000478462 BAG6P46379 1132 aa10.02□□□□□ -0.81
MSL3-214ENST00000478462 PTF1AQ7RTS3 328 aa10.02□□□□□ -0.81
MSL3-214ENST00000478462 VSIG10Q8N0Z9 540 aa10.02□□□□□ -0.81
MSL3-214ENST00000478462 RRP7AQ9Y3A4 280 aaKnown RBP10.02□□□□□ -0.81
MSL3-214ENST00000478462 TNS1Q9HBL0 1735 aaKnown RBP10.02□□□□□ -0.81
MSL3-214ENST00000478462 KDM6AO15550 1401 aaPredicted RBP10.01□□□□□ -0.81
MSL3-214ENST00000478462 LMOD3Q0VAK6 560 aa10.01□□□□□ -0.81
MSL3-214ENST00000478462 TEFQ10587 303 aa10.01□□□□□ -0.81
MSL3-214ENST00000478462 MCM10Q7L590 875 aa10.01□□□□□ -0.81
MSL3-214ENST00000478462 NFATC2IPQ8NCF5 419 aa10.01□□□□□ -0.81
MSL3-214ENST00000478462 IL17REQ8NFR9 667 aa10.01□□□□□ -0.81
MSL3-214ENST00000478462 PIGBQ92521 554 aa10.01□□□□□ -0.81
MSL3-214ENST00000478462 EN1Q05925 392 aaPredicted RBP10□□□□□ -0.81
MSL3-214ENST00000478462 DCTN1Q14203 1278 aa10□□□□□ -0.81
MSL3-214ENST00000478462 DEFB132Q7Z7B7 95 aa10□□□□□ -0.81
MSL3-214ENST00000478462 SLC52A2Q9HAB3 445 aa10□□□□□ -0.81
MSL3-214ENST00000478462 SENP3-EIF4A1A0A087X0R7 540 aa9.99□□□□□ -0.81
MSL3-214ENST00000478462 SMARCC1Q92922 1105 aaPredicted RBP9.99□□□□□ -0.81
MSL3-214ENST00000478462 PLSCR1O15162 318 aa9.98□□□□□ -0.81
MSL3-214ENST00000478462 THUMPD2Q9BTF0 503 aaKnown RBP9.98□□□□□ -0.81
MSL3-214ENST00000478462 ADAMTS7Q9UKP4 1686 aa9.98□□□□□ -0.81
MSL3-214ENST00000478462 SIPA1L3O60292 1781 aaPredicted RBP9.98□□□□□ -0.81
MSL3-214ENST00000478462 PYGBP11216 843 aa9.97□□□□□ -0.81
MSL3-214ENST00000478462 TAF7Q15545 349 aaPredicted RBP9.97□□□□□ -0.81
MSL3-214ENST00000478462 EZH2Q15910 746 aaKnown RBP9.97□□□□□ -0.81
MSL3-214ENST00000478462 ASAP1Q9ULH1 1129 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms