RNA–Protein interactions for RNA: ENST00000478295.1

PROM2-208, Transcript of prominin 2, humanhuman

TSL 3

Gene PROM2, Length 508 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2-208ENST00000478295 TMOD3Q9NYL9 352 aa20.11■□□□□ 0.81
PROM2-208ENST00000478295 TAF1LQ8IZX4 1826 aa20.11■□□□□ 0.81
PROM2-208ENST00000478295 PLEKHO1Q53GL0 409 aaPredicted RBP20.09■□□□□ 0.81
PROM2-208ENST00000478295 LOC102724428A0A0B4J2F2 783 aa20.08■□□□□ 0.81
PROM2-208ENST00000478295 HSP90AB1P08238 724 aaKnown RBP20.08■□□□□ 0.81
PROM2-208ENST00000478295 SIK1P57059 783 aa20.08■□□□□ 0.81
PROM2-208ENST00000478295 AMOTQ4VCS5 1084 aa20.08■□□□□ 0.81
PROM2-208ENST00000478295 LINC00116Q8NCU8 138 aa20.08■□□□□ 0.81
PROM2-208ENST00000478295 GNPATO15228 680 aa20.07■□□□□ 0.8
PROM2-208ENST00000478295 PER1O15534 1290 aaPredicted RBP20.07■□□□□ 0.8
PROM2-208ENST00000478295 SSFA2P28290 1259 aa20.07■□□□□ 0.8
PROM2-208ENST00000478295 IL13P35225 146 aa20.06■□□□□ 0.8
PROM2-208ENST00000478295 ATP6V1AP38606 617 aa20.06■□□□□ 0.8
PROM2-208ENST00000478295 ASAP1Q9ULH1 1129 aa20.06■□□□□ 0.8
PROM2-208ENST00000478295 KDRP35968 1356 aa20.06■□□□□ 0.8
PROM2-208ENST00000478295 ZNF530Q6P9A1 599 aaPredicted RBP20.05■□□□□ 0.8
PROM2-208ENST00000478295 AEBP1Q8IUX7 1158 aa20.05■□□□□ 0.8
PROM2-208ENST00000478295 DCAF5Q96JK2 942 aa20.05■□□□□ 0.8
PROM2-208ENST00000478295 ERVV-2B6SEH9 535 aa20.04■□□□□ 0.8
PROM2-208ENST00000478295 SULT6B1Q6IMI4 303 aa20.04■□□□□ 0.8
PROM2-208ENST00000478295 UBR3Q6ZT12 1888 aa20.03■□□□□ 0.8
PROM2-208ENST00000478295 MTHFSP49914 203 aa20.03■□□□□ 0.8
PROM2-208ENST00000478295 ITPK1Q13572 414 aa20.03■□□□□ 0.8
PROM2-208ENST00000478295 CC2D1BQ5T0F9 858 aaKnown RBP20.03■□□□□ 0.8
PROM2-208ENST00000478295 C1orf141Q5JVX7 400 aa20.02■□□□□ 0.8
PROM2-208ENST00000478295 ATG3Q9NT62 314 aa20.02■□□□□ 0.8
PROM2-208ENST00000478295 ADCY9O60503 1353 aa20.02■□□□□ 0.8
PROM2-208ENST00000478295 NPC1L1Q9UHC9 1359 aa20.02■□□□□ 0.8
PROM2-208ENST00000478295 KDM6AO15550 1401 aaPredicted RBP20.02■□□□□ 0.79
PROM2-208ENST00000478295 MMP10P09238 476 aa20.01■□□□□ 0.79
PROM2-208ENST00000478295 RBM42Q9BTD8 480 aaKnown RBP20■□□□□ 0.79
PROM2-208ENST00000478295 HSPA6P17066 643 aa19.99■□□□□ 0.79
PROM2-208ENST00000478295 CABP4P57796 275 aa19.99■□□□□ 0.79
PROM2-208ENST00000478295 IFFO2Q5TF58 517 aa19.99■□□□□ 0.79
PROM2-208ENST00000478295 RTCBQ9Y3I0 505 aaKnown RBP19.98■□□□□ 0.79
PROM2-208ENST00000478295 CEP350Q5VT06 3117 aa19.98■□□□□ 0.79
PROM2-208ENST00000478295 ZNF831Q5JPB2 1677 aa19.97■□□□□ 0.79
PROM2-208ENST00000478295 DIAPH1O60610 1272 aaKnown RBP19.97■□□□□ 0.79
PROM2-208ENST00000478295 TRAPPC3LQ5T215 181 aa19.97■□□□□ 0.79
PROM2-208ENST00000478295 BCS1LQ9Y276 419 aa19.96■□□□□ 0.79
PROM2-208ENST00000478295 A0A0G2JLW4 131 aa19.94■□□□□ 0.78
PROM2-208ENST00000478295 HMOX1P09601 288 aa19.94■□□□□ 0.78
PROM2-208ENST00000478295 AKAP4Q5JQC9 854 aa19.94■□□□□ 0.78
PROM2-208ENST00000478295 CICQ96RK0 1608 aaPredicted RBP19.94■□□□□ 0.78
PROM2-208ENST00000478295 PXDNLA1KZ92 1463 aa19.93■□□□□ 0.78
PROM2-208ENST00000478295 SCN11AQ9UI33 1791 aa19.93■□□□□ 0.78
PROM2-208ENST00000478295 NLGN1Q8N2Q7 840 aa19.93■□□□□ 0.78
PROM2-208ENST00000478295 SLC4A9Q96Q91 983 aa19.93■□□□□ 0.78
PROM2-208ENST00000478295 RFC4P35249 363 aa19.92■□□□□ 0.78
PROM2-208ENST00000478295 CNGB1Q14028 1251 aaPredicted RBP19.92■□□□□ 0.78
PROM2-208ENST00000478295 ARHGAP27Q6ZUM4 889 aa19.92■□□□□ 0.78
PROM2-208ENST00000478295 NFATC2IPQ8NCF5 419 aa19.92■□□□□ 0.78
PROM2-208ENST00000478295 CCDC87Q9NVE4 849 aa19.92■□□□□ 0.78
PROM2-208ENST00000478295 COL3A1P02461 1466 aaPredicted RBP19.92■□□□□ 0.78
PROM2-208ENST00000478295 COL5A3P25940 1745 aaPredicted RBP19.91■□□□□ 0.78
PROM2-208ENST00000478295 KIF3CO14782 793 aa19.91■□□□□ 0.78
PROM2-208ENST00000478295 TGFB2P61812 414 aa19.91■□□□□ 0.78
PROM2-208ENST00000478295 RC3H1Q5TC82 1133 aaKnown RBP19.91■□□□□ 0.78
PROM2-208ENST00000478295 ARHGEF1Q92888 912 aaKnown RBP19.91■□□□□ 0.78
PROM2-208ENST00000478295 PARP3Q9Y6F1 533 aa19.91■□□□□ 0.78
PROM2-208ENST00000478295 FCHSD2O94868 740 aa19.9■□□□□ 0.78
PROM2-208ENST00000478295 CNTNAP4Q9C0A0 1308 aa19.9■□□□□ 0.78
PROM2-208ENST00000478295 PTCD1O75127 700 aaKnown RBP19.89■□□□□ 0.77
PROM2-208ENST00000478295 DPEP1P16444 411 aa19.89■□□□□ 0.77
PROM2-208ENST00000478295 N4BP2Q86UW6 1770 aaPredicted RBP19.88■□□□□ 0.77
PROM2-208ENST00000478295 C10orf71Q711Q0 1435 aa19.88■□□□□ 0.77
PROM2-208ENST00000478295 GYS1P13807 737 aa19.88■□□□□ 0.77
PROM2-208ENST00000478295 ADRA2BP18089 450 aa19.88■□□□□ 0.77
PROM2-208ENST00000478295 SLC52A2Q9HAB3 445 aa19.88■□□□□ 0.77
PROM2-208ENST00000478295 MRC1P22897 1456 aa19.87■□□□□ 0.77
PROM2-208ENST00000478295 RPS6KA4O75676 772 aa19.87■□□□□ 0.77
PROM2-208ENST00000478295 MTHFSDQ2M296 383 aaKnown RBP19.87■□□□□ 0.77
PROM2-208ENST00000478295 U2SURPO15042 1029 aaKnown RBP19.86■□□□□ 0.77
PROM2-208ENST00000478295 RNMTO43148 476 aaKnown RBP19.86■□□□□ 0.77
PROM2-208ENST00000478295 LGR6Q9HBX8 967 aa19.86■□□□□ 0.77
PROM2-208ENST00000478295 VIRMAQ69YN4 1812 aaKnown RBP19.86■□□□□ 0.77
PROM2-208ENST00000478295 ADAMTS7Q9UKP4 1686 aa19.85■□□□□ 0.77
PROM2-208ENST00000478295 CFAP53Q96M91 514 aa19.85■□□□□ 0.77
PROM2-208ENST00000478295 SRP68Q9UHB9 627 aaKnown RBP19.84■□□□□ 0.77
PROM2-208ENST00000478295 MYH14Q7Z406 1995 aaKnown RBP19.84■□□□□ 0.77
PROM2-208ENST00000478295 C4AP0C0L4 1744 aa19.84■□□□□ 0.77
PROM2-208ENST00000478295 TJP1Q07157 1748 aa19.84■□□□□ 0.77
PROM2-208ENST00000478295 KIF13BQ9NQT8 1826 aa19.83■□□□□ 0.77
PROM2-208ENST00000478295 KIAA1551Q9HCM1 1747 aa19.83■□□□□ 0.77
PROM2-208ENST00000478295 TOMM70O94826 608 aa19.83■□□□□ 0.77
PROM2-208ENST00000478295 CRKLP46109 303 aaKnown RBP19.83■□□□□ 0.77
PROM2-208ENST00000478295 APLP1P51693 650 aa19.83■□□□□ 0.77
PROM2-208ENST00000478295 NMRK2Q9NPI5 230 aa19.83■□□□□ 0.77
PROM2-208ENST00000478295 C9orf131Q5VYM1 1079 aa19.82■□□□□ 0.76
PROM2-208ENST00000478295 GAS2L2Q8NHY3 880 aa19.82■□□□□ 0.76
PROM2-208ENST00000478295 C16orf71Q8IYS4 520 aaPredicted RBP19.81■□□□□ 0.76
PROM2-208ENST00000478295 PIM2Q9P1W9 311 aa19.81■□□□□ 0.76
PROM2-208ENST00000478295 FKBP8Q14318 412 aa19.8■□□□□ 0.76
PROM2-208ENST00000478295 PPP2R1AP30153 589 aa19.79■□□□□ 0.76
PROM2-208ENST00000478295 SLC39A6Q13433 755 aa19.79■□□□□ 0.76
PROM2-208ENST00000478295 DALRD3Q5D0E6 543 aaKnown RBP19.79■□□□□ 0.76
PROM2-208ENST00000478295 NUDCQ9Y266 331 aa19.79■□□□□ 0.76
PROM2-208ENST00000478295 USP42Q9H9J4 1324 aaKnown RBP19.78■□□□□ 0.76
PROM2-208ENST00000478295 KCPQ6ZWJ8 1503 aa19.78■□□□□ 0.76
PROM2-208ENST00000478295 DNAJC10Q8IXB1 793 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms