RNA–Protein interactions for RNA: ENST00000478264.1

PLOD3-213, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 663 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-213ENST00000478264 PIGBQ92521 554 aa23.88■■□□□ 1.41
PLOD3-213ENST00000478264 NFATC2IPQ8NCF5 419 aa23.87■■□□□ 1.41
PLOD3-213ENST00000478264 UPF1Q92900 1129 aaKnown RBP eCLIP23.87■■□□□ 1.41
PLOD3-213ENST00000478264 KAT6BQ8WYB5 2073 aa23.87■■□□□ 1.41
PLOD3-213ENST00000478264 THUMPD2Q9BTF0 503 aaKnown RBP23.85■■□□□ 1.41
PLOD3-213ENST00000478264 PAPPAQ13219 1627 aa23.84■■□□□ 1.41
PLOD3-213ENST00000478264 RGPD3A6NKT7 1758 aaPredicted RBP23.84■■□□□ 1.41
PLOD3-213ENST00000478264 RGPD4Q7Z3J3 1758 aa23.84■■□□□ 1.41
PLOD3-213ENST00000478264 SENP3-EIF4A1A0A087X0R7 540 aa23.84■■□□□ 1.41
PLOD3-213ENST00000478264 APBA3O96018 575 aa23.84■■□□□ 1.41
PLOD3-213ENST00000478264 BAG6P46379 1132 aa23.82■■□□□ 1.4
PLOD3-213ENST00000478264 CALD1Q05682 793 aaKnown RBP23.82■■□□□ 1.4
PLOD3-213ENST00000478264 PLSCR1O15162 318 aa23.81■■□□□ 1.4
PLOD3-213ENST00000478264 TAF7Q15545 349 aaPredicted RBP23.81■■□□□ 1.4
PLOD3-213ENST00000478264 WWC1Q8IX03 1113 aa23.81■■□□□ 1.4
PLOD3-213ENST00000478264 SMARCC1Q92922 1105 aaPredicted RBP23.81■■□□□ 1.4
PLOD3-213ENST00000478264 SALL2Q9Y467 1007 aaPredicted RBP23.81■■□□□ 1.4
PLOD3-213ENST00000478264 PALLDQ8WX93 1383 aa23.8■■□□□ 1.4
PLOD3-213ENST00000478264 ATG3Q9NT62 314 aa23.8■■□□□ 1.4
PLOD3-213ENST00000478264 BTBD11A6QL63 1104 aa23.79■■□□□ 1.4
PLOD3-213ENST00000478264 ASAP1Q9ULH1 1129 aa23.79■■□□□ 1.4
PLOD3-213ENST00000478264 LY75O60449 1722 aa23.79■■□□□ 1.4
PLOD3-213ENST00000478264 TTC5Q8N0Z6 440 aa23.77■■□□□ 1.4
PLOD3-213ENST00000478264 BABAM1Q9NWV8 329 aa23.77■■□□□ 1.4
PLOD3-213ENST00000478264 KDM3BQ7LBC6 1761 aa23.77■■□□□ 1.4
PLOD3-213ENST00000478264 UBR2Q8IWV8 1755 aa23.77■■□□□ 1.4
PLOD3-213ENST00000478264 SLC39A6Q13433 755 aa23.76■■□□□ 1.39
PLOD3-213ENST00000478264 ZNF790Q6PG37 636 aa23.76■■□□□ 1.39
PLOD3-213ENST00000478264 KCPQ6ZWJ8 1503 aa23.75■■□□□ 1.39
PLOD3-213ENST00000478264 HNRNPUQ00839 825 aaKnown RBP eCLIP23.75■■□□□ 1.39
PLOD3-213ENST00000478264 EN1Q05925 392 aaPredicted RBP23.75■■□□□ 1.39
PLOD3-213ENST00000478264 DEFB132Q7Z7B7 95 aa23.75■■□□□ 1.39
PLOD3-213ENST00000478264 WDR63Q8IWG1 891 aa23.75■■□□□ 1.39
PLOD3-213ENST00000478264 IFT57Q9NWB7 429 aa23.75■■□□□ 1.39
PLOD3-213ENST00000478264 IL16Q14005 1332 aa23.75■■□□□ 1.39
PLOD3-213ENST00000478264 ZNF521Q96K83 1311 aa23.75■■□□□ 1.39
PLOD3-213ENST00000478264 CFAP44Q96MT7 982 aa23.74■■□□□ 1.39
PLOD3-213ENST00000478264 TSPYL4Q9UJ04 414 aa23.74■■□□□ 1.39
PLOD3-213ENST00000478264 GNAI1P63096 354 aa23.73■■□□□ 1.39
PLOD3-213ENST00000478264 CAMKK2Q96RR4 588 aa23.73■■□□□ 1.39
PLOD3-213ENST00000478264 ZNF831Q5JPB2 1677 aa23.73■■□□□ 1.39
PLOD3-213ENST00000478264 RREB1Q92766 1687 aa23.73■■□□□ 1.39
PLOD3-213ENST00000478264 EZH2Q15910 746 aaKnown RBP23.72■■□□□ 1.39
PLOD3-213ENST00000478264 TXNRD1Q16881 649 aa23.72■■□□□ 1.39
PLOD3-213ENST00000478264 MIS18AQ9NYP9 233 aa23.72■■□□□ 1.39
PLOD3-213ENST00000478264 LAS1LQ9Y4W2 734 aaKnown RBP23.72■■□□□ 1.39
PLOD3-213ENST00000478264 CICQ96RK0 1608 aaPredicted RBP23.71■■□□□ 1.39
PLOD3-213ENST00000478264 LOC102724428A0A0B4J2F2 783 aa23.71■■□□□ 1.39
PLOD3-213ENST00000478264 CHL1O00533 1208 aa23.71■■□□□ 1.39
PLOD3-213ENST00000478264 ZNF853P0CG23 659 aa23.71■■□□□ 1.39
PLOD3-213ENST00000478264 SIK1P57059 783 aa23.71■■□□□ 1.39
PLOD3-213ENST00000478264 SLC27A3Q5K4L6 730 aa23.71■■□□□ 1.39
PLOD3-213ENST00000478264 RBM42Q9BTD8 480 aaKnown RBP23.71■■□□□ 1.39
PLOD3-213ENST00000478264 PTCD1O75127 700 aaKnown RBP23.7■■□□□ 1.38
PLOD3-213ENST00000478264 FMNL2Q96PY5 1086 aa23.7■■□□□ 1.38
PLOD3-213ENST00000478264 CCNL1Q9UK58 526 aaPredicted RBP23.7■■□□□ 1.38
PLOD3-213ENST00000478264 KCNQ3O43525 872 aa23.69■■□□□ 1.38
PLOD3-213ENST00000478264 HEG1Q9ULI3 1381 aa23.68■■□□□ 1.38
PLOD3-213ENST00000478264 VSIG10Q8N0Z9 540 aa23.68■■□□□ 1.38
PLOD3-213ENST00000478264 PROM2Q8N271 834 aa23.68■■□□□ 1.38
PLOD3-213ENST00000478264 ZNF496Q96IT1 587 aaPredicted RBP23.68■■□□□ 1.38
PLOD3-213ENST00000478264 MBIPQ9NS73 344 aa23.68■■□□□ 1.38
PLOD3-213ENST00000478264 TJP1Q07157 1748 aa23.67■■□□□ 1.38
PLOD3-213ENST00000478264 NUP188Q5SRE5 1749 aa23.67■■□□□ 1.38
PLOD3-213ENST00000478264 ZBED9Q6R2W3 1325 aa23.66■■□□□ 1.38
PLOD3-213ENST00000478264 HMGB2P26583 209 aaKnown RBP23.66■■□□□ 1.38
PLOD3-213ENST00000478264 ATP6V1AP38606 617 aa23.66■■□□□ 1.38
PLOD3-213ENST00000478264 EIF4A1P60842 406 aaKnown RBP23.66■■□□□ 1.38
PLOD3-213ENST00000478264 GOLGA2Q08379 1002 aa23.66■■□□□ 1.38
PLOD3-213ENST00000478264 SLC4A9Q96Q91 983 aa23.66■■□□□ 1.38
PLOD3-213ENST00000478264 C5P01031 1676 aa23.66■■□□□ 1.38
PLOD3-213ENST00000478264 LRRC4BQ9NT99 713 aa23.65■■□□□ 1.38
PLOD3-213ENST00000478264 MYH16Q9H6N6 1097 aa23.64■■□□□ 1.37
PLOD3-213ENST00000478264 TAF1LQ8IZX4 1826 aa23.63■■□□□ 1.37
PLOD3-213ENST00000478264 COL5A3P25940 1745 aaPredicted RBP23.63■■□□□ 1.37
PLOD3-213ENST00000478264 FANCIQ9NVI1 1328 aa23.62■■□□□ 1.37
PLOD3-213ENST00000478264 E9PSI1 815 aa23.62■■□□□ 1.37
PLOD3-213ENST00000478264 SNRPA1P09661 255 aaKnown RBP23.62■■□□□ 1.37
PLOD3-213ENST00000478264 KCNQ4P56696 695 aa23.62■■□□□ 1.37
PLOD3-213ENST00000478264 ITPK1Q13572 414 aa23.62■■□□□ 1.37
PLOD3-213ENST00000478264 TSR2Q969E8 191 aaKnown RBP23.62■■□□□ 1.37
PLOD3-213ENST00000478264 SPINK5Q9NQ38 1064 aaPredicted RBP23.62■■□□□ 1.37
PLOD3-213ENST00000478264 LAMB4A4D0S4 1761 aa23.61■■□□□ 1.37
PLOD3-213ENST00000478264 TEX13AQ9BXU3 409 aaPredicted RBP23.61■■□□□ 1.37
PLOD3-213ENST00000478264 C4BP0C0L5 1744 aa23.6■■□□□ 1.37
PLOD3-213ENST00000478264 DNAJC10Q8IXB1 793 aa23.6■■□□□ 1.37
PLOD3-213ENST00000478264 GIGYF1O75420 1035 aaPredicted RBP23.59■■□□□ 1.37
PLOD3-213ENST00000478264 SLFN5Q08AF3 891 aa23.59■■□□□ 1.37
PLOD3-213ENST00000478264 LINC00116Q8NCU8 138 aa23.59■■□□□ 1.37
PLOD3-213ENST00000478264 STARD3NLO95772 234 aa23.57■■□□□ 1.36
PLOD3-213ENST00000478264 HOXB7P09629 217 aa23.57■■□□□ 1.36
PLOD3-213ENST00000478264 CNTNAP4Q9C0A0 1308 aa23.57■■□□□ 1.36
PLOD3-213ENST00000478264 PRAMEF22A3QJZ6 481 aa23.56■■□□□ 1.36
PLOD3-213ENST00000478264 CYP19A1P11511 503 aaPredicted RBP23.56■■□□□ 1.36
PLOD3-213ENST00000478264 KRT24Q2M2I5 525 aa23.56■■□□□ 1.36
PLOD3-213ENST00000478264 CDCA7LQ96GN5 454 aa23.56■■□□□ 1.36
PLOD3-213ENST00000478264 SOS1Q07889 1333 aaPredicted RBP23.56■■□□□ 1.36
PLOD3-213ENST00000478264 NBPF14Q5TI25 921 aa23.55■■□□□ 1.36
PLOD3-213ENST00000478264 RC3H1Q5TC82 1133 aaKnown RBP23.54■■□□□ 1.36
PLOD3-213ENST00000478264 AKT1S1Q96B36 256 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms