RNA–Protein interactions for RNA: ENST00000478087.5

HPS1-211, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 5

Gene HPS1, Length 971 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-211ENST00000478087 ERVV-2B6SEH9 535 aa17.65■□□□□ 0.42
HPS1-211ENST00000478087 KLHL34Q8N239 644 aa17.65■□□□□ 0.42
HPS1-211ENST00000478087 DCAF5Q96JK2 942 aa17.65■□□□□ 0.42
HPS1-211ENST00000478087 MYH14Q7Z406 1995 aaKnown RBP17.64■□□□□ 0.41
HPS1-211ENST00000478087 PHF14O94880 888 aa17.64■□□□□ 0.41
HPS1-211ENST00000478087 ATP6V1AP38606 617 aa17.64■□□□□ 0.41
HPS1-211ENST00000478087 DIAPH1O60610 1272 aaKnown RBP17.63■□□□□ 0.41
HPS1-211ENST00000478087 CABP4P57796 275 aa17.63■□□□□ 0.41
HPS1-211ENST00000478087 C1orf141Q5JVX7 400 aa17.63■□□□□ 0.41
HPS1-211ENST00000478087 NFATC2IPQ8NCF5 419 aa17.63■□□□□ 0.41
HPS1-211ENST00000478087 AK7Q96M32 723 aa17.63■□□□□ 0.41
HPS1-211ENST00000478087 RBM42Q9BTD8 480 aaKnown RBP17.63■□□□□ 0.41
HPS1-211ENST00000478087 LGR6Q9HBX8 967 aa17.63■□□□□ 0.41
HPS1-211ENST00000478087 HSP90AB1P08238 724 aaKnown RBP17.62■□□□□ 0.41
HPS1-211ENST00000478087 POLD1P28340 1107 aa17.62■□□□□ 0.41
HPS1-211ENST00000478087 PLEKHG2Q9H7P9 1386 aa17.62■□□□□ 0.41
HPS1-211ENST00000478087 NPC1L1Q9UHC9 1359 aa17.62■□□□□ 0.41
HPS1-211ENST00000478087 COL3A1P02461 1466 aaPredicted RBP17.62■□□□□ 0.41
HPS1-211ENST00000478087 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.61■□□□□ 0.41
HPS1-211ENST00000478087 MTHFSDQ2M296 383 aaKnown RBP17.6■□□□□ 0.41
HPS1-211ENST00000478087 NLGN2Q8NFZ4 835 aa17.6■□□□□ 0.41
HPS1-211ENST00000478087 COL5A3P25940 1745 aaPredicted RBP17.6■□□□□ 0.41
HPS1-211ENST00000478087 DCAF8L1A6NGE4 600 aa17.59■□□□□ 0.41
HPS1-211ENST00000478087 PTCD1O75127 700 aaKnown RBP17.59■□□□□ 0.41
HPS1-211ENST00000478087 CHD4Q14839 1912 aa17.59■□□□□ 0.41
HPS1-211ENST00000478087 U2SURPO15042 1029 aaKnown RBP17.58■□□□□ 0.4
HPS1-211ENST00000478087 GNPATO15228 680 aa17.58■□□□□ 0.4
HPS1-211ENST00000478087 YY1P25490 414 aa17.58■□□□□ 0.4
HPS1-211ENST00000478087 AKAP4Q5JQC9 854 aa17.58■□□□□ 0.4
HPS1-211ENST00000478087 MAP3K5Q99683 1374 aa17.57■□□□□ 0.4
HPS1-211ENST00000478087 FLAD1Q8NFF5 587 aa17.57■□□□□ 0.4
HPS1-211ENST00000478087 ZNF831Q5JPB2 1677 aa17.57■□□□□ 0.4
HPS1-211ENST00000478087 RNMTO43148 476 aaKnown RBP17.56■□□□□ 0.4
HPS1-211ENST00000478087 SSFA2P28290 1259 aa17.55■□□□□ 0.4
HPS1-211ENST00000478087 PPP2R1AP30153 589 aa17.55■□□□□ 0.4
HPS1-211ENST00000478087 SLC39A6Q13433 755 aa17.55■□□□□ 0.4
HPS1-211ENST00000478087 TJP1Q07157 1748 aa17.55■□□□□ 0.4
HPS1-211ENST00000478087 PELP1Q8IZL8 1130 aaKnown RBP17.54■□□□□ 0.4
HPS1-211ENST00000478087 SLC52A2Q9HAB3 445 aa17.54■□□□□ 0.4
HPS1-211ENST00000478087 ADAMTS7Q9UKP4 1686 aa17.53■□□□□ 0.4
HPS1-211ENST00000478087 PHACTR3Q96KR7 559 aa17.53■□□□□ 0.4
HPS1-211ENST00000478087 HMGB2P26583 209 aaKnown RBP17.52■□□□□ 0.4
HPS1-211ENST00000478087 GPR162Q16538 588 aa17.52■□□□□ 0.4
HPS1-211ENST00000478087 ARHGEF1Q92888 912 aaKnown RBP17.52■□□□□ 0.4
HPS1-211ENST00000478087 C4AP0C0L4 1744 aa17.51■□□□□ 0.39
HPS1-211ENST00000478087 TRAPPC3LQ5T215 181 aa17.51■□□□□ 0.39
HPS1-211ENST00000478087 RC3H1Q5TC82 1133 aaKnown RBP17.51■□□□□ 0.39
HPS1-211ENST00000478087 IL17REQ8NFR9 667 aa17.51■□□□□ 0.39
HPS1-211ENST00000478087 RTCBQ9Y3I0 505 aaKnown RBP17.51■□□□□ 0.39
HPS1-211ENST00000478087 YBX3P16989 372 aaKnown RBP eCLIP17.5■□□□□ 0.391e-7■■□□□ 14.5
HPS1-211ENST00000478087 CNTNAP4Q9C0A0 1308 aa17.49■□□□□ 0.39
HPS1-211ENST00000478087 RPS6KA4O75676 772 aa17.49■□□□□ 0.39
HPS1-211ENST00000478087 CRKLP46109 303 aaKnown RBP17.49■□□□□ 0.39
HPS1-211ENST00000478087 DNAJC10Q8IXB1 793 aa17.49■□□□□ 0.39
HPS1-211ENST00000478087 RSPH6AQ9H0K4 717 aa17.49■□□□□ 0.39
HPS1-211ENST00000478087 WWC3Q9ULE0 1092 aa17.49■□□□□ 0.39
HPS1-211ENST00000478087 MRC1P22897 1456 aa17.49■□□□□ 0.39
HPS1-211ENST00000478087 SIPA1L3O60292 1781 aaPredicted RBP17.48■□□□□ 0.39
HPS1-211ENST00000478087 PRKAR2BP31323 418 aa17.48■□□□□ 0.39
HPS1-211ENST00000478087 INTS5Q6P9B9 1019 aaKnown RBP17.48■□□□□ 0.39
HPS1-211ENST00000478087 CFAP53Q96M91 514 aa17.48■□□□□ 0.39
HPS1-211ENST00000478087 SRP68Q9UHB9 627 aaKnown RBP17.47■□□□□ 0.39
HPS1-211ENST00000478087 CD2APQ9Y5K6 639 aa17.47■□□□□ 0.39
HPS1-211ENST00000478087 UBR2Q8IWV8 1755 aa17.47■□□□□ 0.39
HPS1-211ENST00000478087 KCPQ6ZWJ8 1503 aa17.47■□□□□ 0.39
HPS1-211ENST00000478087 N4BP2Q86UW6 1770 aaPredicted RBP17.46■□□□□ 0.39
HPS1-211ENST00000478087 GNAT3A8MTJ3 354 aa17.46■□□□□ 0.39
HPS1-211ENST00000478087 MMP10P09238 476 aa17.46■□□□□ 0.39
HPS1-211ENST00000478087 U2AF1L5P0DN76 240 aaPredicted RBP17.46■□□□□ 0.39
HPS1-211ENST00000478087 GYS1P13807 737 aa17.46■□□□□ 0.39
HPS1-211ENST00000478087 U2AF1Q01081 240 aaKnown RBP eCLIP17.46■□□□□ 0.39
HPS1-211ENST00000478087 RFC4P35249 363 aa17.45■□□□□ 0.38
HPS1-211ENST00000478087 CICQ96RK0 1608 aaPredicted RBP17.45■□□□□ 0.38
HPS1-211ENST00000478087 CYP19A1P11511 503 aaPredicted RBP17.44■□□□□ 0.38
HPS1-211ENST00000478087 GAS2L2Q8NHY3 880 aa17.44■□□□□ 0.38
HPS1-211ENST00000478087 DLG5Q8TDM6 1919 aa17.44■□□□□ 0.38
HPS1-211ENST00000478087 KIF13BQ9NQT8 1826 aa17.43■□□□□ 0.38
HPS1-211ENST00000478087 KCNQ3O43525 872 aa17.43■□□□□ 0.38
HPS1-211ENST00000478087 NUDCQ9Y266 331 aa17.43■□□□□ 0.38
HPS1-211ENST00000478087 KIAA1551Q9HCM1 1747 aa17.42■□□□□ 0.38
HPS1-211ENST00000478087 ADRA2BP18089 450 aa17.42■□□□□ 0.38
HPS1-211ENST00000478087 NLGN1Q8N2Q7 840 aa17.42■□□□□ 0.38
HPS1-211ENST00000478087 ZNF784Q8NCA9 323 aaPredicted RBP17.42■□□□□ 0.38
HPS1-211ENST00000478087 CCDC87Q9NVE4 849 aa17.42■□□□□ 0.38
HPS1-211ENST00000478087 TEFQ10587 303 aa17.41■□□□□ 0.38
HPS1-211ENST00000478087 DDX10Q13206 875 aaKnown RBP17.41■□□□□ 0.38
HPS1-211ENST00000478087 DCTN1Q14203 1278 aa17.41■□□□□ 0.38
HPS1-211ENST00000478087 FKBP8Q14318 412 aa17.41■□□□□ 0.38
HPS1-211ENST00000478087 ZNF496Q96IT1 587 aaPredicted RBP17.41■□□□□ 0.38
HPS1-211ENST00000478087 FCHSD2O94868 740 aa17.4■□□□□ 0.38
HPS1-211ENST00000478087 MCM10Q7L590 875 aa17.4■□□□□ 0.38
HPS1-211ENST00000478087 ZBTB1Q9Y2K1 713 aa17.4■□□□□ 0.38
HPS1-211ENST00000478087 ZNF790Q6PG37 636 aa17.39■□□□□ 0.37
HPS1-211ENST00000478087 SOS1Q07889 1333 aaPredicted RBP17.39■□□□□ 0.37
HPS1-211ENST00000478087 USP42Q9H9J4 1324 aaKnown RBP17.39■□□□□ 0.37
HPS1-211ENST00000478087 CEMIPQ8WUJ3 1361 aa17.39■□□□□ 0.37
HPS1-211ENST00000478087 AFDNP55196 1824 aaKnown RBP17.38■□□□□ 0.37
HPS1-211ENST00000478087 A0A0G2JLW4 131 aa17.38■□□□□ 0.37
HPS1-211ENST00000478087 CANXP27824 592 aaKnown RBP17.38■□□□□ 0.37
HPS1-211ENST00000478087 DDR1Q08345 913 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms