RNA–Protein interactions for RNA: ENST00000478080.5

CDHR3-211, Transcript of cadherin related family member 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDHR3, Length 2,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-211ENST00000478080 CEMIPQ8WUJ3 1361 aa11.06□□□□□ -0.64
CDHR3-211ENST00000478080 ANXA1P04083 346 aa11.05□□□□□ -0.64
CDHR3-211ENST00000478080 HSPA2P54652 639 aa11.05□□□□□ -0.64
CDHR3-211ENST00000478080 FAM208AQ9UK61 1670 aaKnown RBP11.05□□□□□ -0.64
CDHR3-211ENST00000478080 PXDNQ92626 1479 aa11.05□□□□□ -0.64
CDHR3-211ENST00000478080 EIF4A1P60842 406 aaKnown RBP11.05□□□□□ -0.64
CDHR3-211ENST00000478080 CABLES1Q8TDN4 633 aa11.05□□□□□ -0.64
CDHR3-211ENST00000478080 ANTXR1Q9H6X2 564 aa11.05□□□□□ -0.64
CDHR3-211ENST00000478080 EXOC6BQ9Y2D4 811 aa11.05□□□□□ -0.64
CDHR3-211ENST00000478080 PNMA6EA0A0J9YXQ4 647 aa11.04□□□□□ -0.64
CDHR3-211ENST00000478080 PLEKHO1Q53GL0 409 aaPredicted RBP11.04□□□□□ -0.64
CDHR3-211ENST00000478080 AKAP4Q5JQC9 854 aa11.04□□□□□ -0.64
CDHR3-211ENST00000478080 TMEM94Q12767 1356 aa11.04□□□□□ -0.64
CDHR3-211ENST00000478080 TRPM3Q9HCF6 1732 aaPredicted RBP11.04□□□□□ -0.64
CDHR3-211ENST00000478080 BTBD11A6QL63 1104 aa11.04□□□□□ -0.64
CDHR3-211ENST00000478080 GNAI2P04899 355 aa11.04□□□□□ -0.64
CDHR3-211ENST00000478080 TEFQ10587 303 aa11.04□□□□□ -0.64
CDHR3-211ENST00000478080 TTC22Q5TAA0 569 aa11.04□□□□□ -0.64
CDHR3-211ENST00000478080 CHPF2Q9P2E5 772 aa11.04□□□□□ -0.64
CDHR3-211ENST00000478080 SLIT3O75094 1523 aa11.03□□□□□ -0.64
CDHR3-211ENST00000478080 PRAMEF22A3QJZ6 481 aa11.03□□□□□ -0.64
CDHR3-211ENST00000478080 ATF3P18847 181 aa11.03□□□□□ -0.64
CDHR3-211ENST00000478080 RBM25P49756 843 aaKnown RBP11.03□□□□□ -0.64
CDHR3-211ENST00000478080 BABAM1Q9NWV8 329 aa11.03□□□□□ -0.64
CDHR3-211ENST00000478080 RGPD5Q99666 1765 aa11.03□□□□□ -0.64
CDHR3-211ENST00000478080 RNMTO43148 476 aaKnown RBP11.03□□□□□ -0.64
CDHR3-211ENST00000478080 TSHZ3Q63HK5 1081 aa11.03□□□□□ -0.64
CDHR3-211ENST00000478080 KIF2CQ99661 725 aa11.03□□□□□ -0.64
CDHR3-211ENST00000478080 LRRFIP2Q9Y608 721 aaKnown RBP11.03□□□□□ -0.64
CDHR3-211ENST00000478080 CDC45O75419 566 aa11.02□□□□□ -0.65
CDHR3-211ENST00000478080 C1orf141Q5JVX7 400 aa11.02□□□□□ -0.65
CDHR3-211ENST00000478080 RBM42Q9BTD8 480 aaKnown RBP11.02□□□□□ -0.65
CDHR3-211ENST00000478080 USP44Q9H0E7 712 aa11.02□□□□□ -0.65
CDHR3-211ENST00000478080 STRCP1A6NGW2 1772 aa11.02□□□□□ -0.65
CDHR3-211ENST00000478080 DNAJC5Q9H3Z4 198 aa11.02□□□□□ -0.65
CDHR3-211ENST00000478080 PHRF1Q9P1Y6 1649 aaKnown RBP11.01□□□□□ -0.65
CDHR3-211ENST00000478080 HMMRO75330 724 aa11.01□□□□□ -0.65
CDHR3-211ENST00000478080 SDSP20132 328 aa11.01□□□□□ -0.65
CDHR3-211ENST00000478080 MST1RQ04912 1400 aa11.01□□□□□ -0.65
CDHR3-211ENST00000478080 CD2BP2O95400 341 aaKnown RBP11.01□□□□□ -0.65
CDHR3-211ENST00000478080 CHRNA2Q15822 529 aa11.01□□□□□ -0.65
CDHR3-211ENST00000478080 AMOTQ4VCS5 1084 aa11.01□□□□□ -0.65
CDHR3-211ENST00000478080 BRPF3Q9ULD4 1205 aa11.01□□□□□ -0.65
CDHR3-211ENST00000478080 MED1Q15648 1581 aaPredicted RBP11.01□□□□□ -0.65
CDHR3-211ENST00000478080 ERBB3P21860 1342 aa11□□□□□ -0.65
CDHR3-211ENST00000478080 GNAI3P08754 354 aa11□□□□□ -0.65
CDHR3-211ENST00000478080 NLRP2Q9NX02 1062 aa11□□□□□ -0.65
CDHR3-211ENST00000478080 PI4KAP2A4QPH2 592 aa11□□□□□ -0.65
CDHR3-211ENST00000478080 ATP8B2P98198 1209 aa11□□□□□ -0.65
CDHR3-211ENST00000478080 PROSER3Q2NL68 480 aa11□□□□□ -0.65
CDHR3-211ENST00000478080 PI4KAP1Q8N8J0 262 aa11□□□□□ -0.65
CDHR3-211ENST00000478080 LMO7Q8WWI1 1683 aa11□□□□□ -0.65
CDHR3-211ENST00000478080 KDM3BQ7LBC6 1761 aa10.99□□□□□ -0.65
CDHR3-211ENST00000478080 SOS1Q07889 1333 aaPredicted RBP10.99□□□□□ -0.65
CDHR3-211ENST00000478080 HSCBQ8IWL3 235 aa10.99□□□□□ -0.65
CDHR3-211ENST00000478080 NBPF7P0C2Y1 421 aaPredicted RBP10.99□□□□□ -0.65
CDHR3-211ENST00000478080 UBTFL1P0CB47 393 aaPredicted RBP10.99□□□□□ -0.65
CDHR3-211ENST00000478080 NCAPD2Q15021 1401 aa10.99□□□□□ -0.65
CDHR3-211ENST00000478080 PDE1AP54750 535 aa10.98□□□□□ -0.65
CDHR3-211ENST00000478080 SLC39A6Q13433 755 aa10.98□□□□□ -0.65
CDHR3-211ENST00000478080 SRCIN1Q9C0H9 1055 aa10.98□□□□□ -0.65
CDHR3-211ENST00000478080 CACNA1FO60840 1977 aa10.98□□□□□ -0.65
CDHR3-211ENST00000478080 FOXD4L1Q9NU39 408 aa10.98□□□□□ -0.65
CDHR3-211ENST00000478080 KIF1AQ12756 1690 aa10.98□□□□□ -0.65
CDHR3-211ENST00000478080 ALS2Q96Q42 1657 aa10.98□□□□□ -0.65
CDHR3-211ENST00000478080 GIGYF1O75420 1035 aaPredicted RBP10.97□□□□□ -0.65
CDHR3-211ENST00000478080 BEND3Q5T5X7 828 aa10.97□□□□□ -0.65
CDHR3-211ENST00000478080 DNAAF4Q8WXU2 420 aa10.97□□□□□ -0.65
CDHR3-211ENST00000478080 LRRCC1Q9C099 1032 aa10.97□□□□□ -0.65
CDHR3-211ENST00000478080 IL1RAPL2Q9NP60 686 aa10.97□□□□□ -0.65
CDHR3-211ENST00000478080 CSB-PGBD3P0DP91 1061 aa10.97□□□□□ -0.65
CDHR3-211ENST00000478080 GSE1Q14687 1217 aa10.97□□□□□ -0.65
CDHR3-211ENST00000478080 ADCY9O60503 1353 aa10.97□□□□□ -0.65
CDHR3-211ENST00000478080 AEBP2Q6ZN18 517 aaPredicted RBP10.96□□□□□ -0.65
CDHR3-211ENST00000478080 PPP1R42Q7Z4L9 355 aa10.96□□□□□ -0.65
CDHR3-211ENST00000478080 RAPGEF4Q8WZA2 1011 aa10.96□□□□□ -0.65
CDHR3-211ENST00000478080 HOXB7P09629 217 aa10.96□□□□□ -0.66
CDHR3-211ENST00000478080 USP26Q9BXU7 913 aa10.96□□□□□ -0.66
CDHR3-211ENST00000478080 IBTKQ9P2D0 1353 aaPredicted RBP10.95□□□□□ -0.66
CDHR3-211ENST00000478080 CADPS2Q86UW7 1296 aa10.95□□□□□ -0.66
CDHR3-211ENST00000478080 SNX21Q969T3 373 aa10.95□□□□□ -0.66
CDHR3-211ENST00000478080 DBF4Q9UBU7 674 aaPredicted RBP10.95□□□□□ -0.66
CDHR3-211ENST00000478080 MAP3K2Q9Y2U5 619 aa10.95□□□□□ -0.66
CDHR3-211ENST00000478080 SALL3Q9BXA9 1300 aa10.95□□□□□ -0.66
CDHR3-211ENST00000478080 PXDNLA1KZ92 1463 aa10.95□□□□□ -0.66
CDHR3-211ENST00000478080 AIMP1Q12904 312 aaKnown RBP10.95□□□□□ -0.66
CDHR3-211ENST00000478080 NUTM1Q86Y26 1132 aa10.95□□□□□ -0.66
CDHR3-211ENST00000478080 NFATC2IPQ8NCF5 419 aa10.95□□□□□ -0.66
CDHR3-211ENST00000478080 CAMTA1Q9Y6Y1 1673 aa10.95□□□□□ -0.66
CDHR3-211ENST00000478080 MEGF6O75095 1541 aa10.94□□□□□ -0.66
CDHR3-211ENST00000478080 SRGAP3O43295 1099 aa10.94□□□□□ -0.66
CDHR3-211ENST00000478080 SURF6O75683 361 aaKnown RBP10.94□□□□□ -0.66
CDHR3-211ENST00000478080 HSP90AB1P08238 724 aaKnown RBP10.94□□□□□ -0.66
CDHR3-211ENST00000478080 MX1P20591 662 aa10.94□□□□□ -0.66
CDHR3-211ENST00000478080 CWF19L2Q2TBE0 894 aaKnown RBP10.94□□□□□ -0.66
CDHR3-211ENST00000478080 OSBPL3Q9H4L5 887 aa10.94□□□□□ -0.66
CDHR3-211ENST00000478080 NPHP3Q7Z494 1330 aa10.94□□□□□ -0.66
CDHR3-211ENST00000478080 SSH3Q8TE77 659 aa10.94□□□□□ -0.66
CDHR3-211ENST00000478080 HEG1Q9ULI3 1381 aa10.94□□□□□ -0.66
CDHR3-211ENST00000478080 KDM6AO15550 1401 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms