RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 SLC16A10Q8TF71 515 aa8.87□□□□□ -0.99
SMNDC1-205ENST00000477763 FAM196BA6NMK8 535 aa8.86□□□□□ -0.99
SMNDC1-205ENST00000477763 RASA1P20936 1047 aa8.86□□□□□ -0.99
SMNDC1-205ENST00000477763 CENPCQ03188 943 aa8.86□□□□□ -0.99
SMNDC1-205ENST00000477763 LARP1Q6PKG0 1096 aaKnown RBP8.86□□□□□ -0.99
SMNDC1-205ENST00000477763 NPAS3Q8IXF0 933 aa8.86□□□□□ -0.99
SMNDC1-205ENST00000477763 SLC4A9Q96Q91 983 aa8.86□□□□□ -0.99
SMNDC1-205ENST00000477763 GRIP2Q9C0E4 1043 aa8.86□□□□□ -0.99
SMNDC1-205ENST00000477763 ERBB4Q15303 1308 aa8.85□□□□□ -0.99
SMNDC1-205ENST00000477763 H3BM21 787 aa8.85□□□□□ -0.99
SMNDC1-205ENST00000477763 BACH1O14867 736 aa8.85□□□□□ -0.99
SMNDC1-205ENST00000477763 SRPK2P78362 688 aaKnown RBP8.85□□□□□ -0.99
SMNDC1-205ENST00000477763 CCDC102BQ68D86 513 aa8.85□□□□□ -0.99
SMNDC1-205ENST00000477763 LYSMD3Q7Z3D4 306 aa8.85□□□□□ -0.99
SMNDC1-205ENST00000477763 ARXQ96QS3 562 aa8.85□□□□□ -0.99
SMNDC1-205ENST00000477763 FHDC1Q9C0D6 1143 aaPredicted RBP8.85□□□□□ -0.99
SMNDC1-205ENST00000477763 KIAA1024Q9UPX6 916 aa8.85□□□□□ -0.99
SMNDC1-205ENST00000477763 SOBPA7XYQ1 873 aa8.84□□□□□ -0.99
SMNDC1-205ENST00000477763 M0R2N6 131 aa8.84□□□□□ -0.99
SMNDC1-205ENST00000477763 DKK1O94907 266 aa8.84□□□□□ -0.99
SMNDC1-205ENST00000477763 STAU1O95793 577 aaKnown RBP8.84□□□□□ -0.99
SMNDC1-205ENST00000477763 RFX1P22670 979 aa8.84□□□□□ -0.99
SMNDC1-205ENST00000477763 PTK7Q13308 1070 aa8.84□□□□□ -0.99
SMNDC1-205ENST00000477763 SLC27A3Q5K4L6 730 aa8.84□□□□□ -0.99
SMNDC1-205ENST00000477763 TPCN2Q8NHX9 752 aa8.84□□□□□ -0.99
SMNDC1-205ENST00000477763 FIGNL2A6NMB9 653 aa8.83□□□□□ -1
SMNDC1-205ENST00000477763 SPATA31C2B4DYI2 1134 aa8.83□□□□□ -1
SMNDC1-205ENST00000477763 USP17L15C9J2P7 530 aa8.83□□□□□ -1
SMNDC1-205ENST00000477763 USP17L10C9JJH3 530 aa8.83□□□□□ -1
SMNDC1-205ENST00000477763 USP17L13C9JLJ4 530 aa8.83□□□□□ -1
SMNDC1-205ENST00000477763 USP17L12C9JPN9 530 aa8.83□□□□□ -1
SMNDC1-205ENST00000477763 USP17L11C9JVI0 530 aa8.83□□□□□ -1
SMNDC1-205ENST00000477763 USP17L21D6R901 530 aa8.83□□□□□ -1
SMNDC1-205ENST00000477763 USP17L18D6R9N7 530 aa8.83□□□□□ -1
SMNDC1-205ENST00000477763 USP17L22D6RA61 530 aa8.83□□□□□ -1
SMNDC1-205ENST00000477763 USP17L17D6RBQ6 530 aa8.83□□□□□ -1
SMNDC1-205ENST00000477763 USP17L19D6RCP7 530 aa8.83□□□□□ -1
SMNDC1-205ENST00000477763 USP17L20D6RJB6 530 aa8.83□□□□□ -1
SMNDC1-205ENST00000477763 SMTNP53814 917 aa8.83□□□□□ -1
SMNDC1-205ENST00000477763 USP17L24Q0WX57 530 aa8.83□□□□□ -1
SMNDC1-205ENST00000477763 MTFR1Q15390 333 aa8.83□□□□□ -1
SMNDC1-205ENST00000477763 TLR1Q15399 786 aa8.83□□□□□ -1
SMNDC1-205ENST00000477763 CRTC2Q53ET0 693 aaPredicted RBP8.83□□□□□ -1
SMNDC1-205ENST00000477763 WDR44Q5JSH3 913 aa8.83□□□□□ -1
SMNDC1-205ENST00000477763 PBXIP1Q96AQ6 731 aa8.83□□□□□ -1
SMNDC1-205ENST00000477763 ZNF358Q9NW07 568 aa8.83□□□□□ -1
SMNDC1-205ENST00000477763 RBM19Q9Y4C8 960 aaKnown RBP8.83□□□□□ -1
SMNDC1-205ENST00000477763 IRF7Q92985 503 aa8.82□□□□□ -1
SMNDC1-205ENST00000477763 ZNF594Q96JF6 807 aaPredicted RBP8.82□□□□□ -1
SMNDC1-205ENST00000477763 ZSCAN10Q96SZ4 725 aaPredicted RBP8.82□□□□□ -1
SMNDC1-205ENST00000477763 GTF2E1P29083 439 aaPredicted RBP8.81□□□□□ -1
SMNDC1-205ENST00000477763 PPARGC1BQ86YN6 1023 aaKnown RBP8.81□□□□□ -1
SMNDC1-205ENST00000477763 ANKMY2Q8IV38 441 aa8.81□□□□□ -1
SMNDC1-205ENST00000477763 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.81□□□□□ -1
SMNDC1-205ENST00000477763 ARID3AQ99856 593 aa8.81□□□□□ -1
SMNDC1-205ENST00000477763 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.8□□□□□ -1
SMNDC1-205ENST00000477763 A6NJY4 79 aa8.8□□□□□ -1
SMNDC1-205ENST00000477763 CDK2AP1O14519 115 aa8.8□□□□□ -1
SMNDC1-205ENST00000477763 PPP1R15AO75807 674 aaPredicted RBP8.8□□□□□ -1
SMNDC1-205ENST00000477763 ATG7O95352 703 aa8.8□□□□□ -1
SMNDC1-205ENST00000477763 SEC13P55735 322 aa8.8□□□□□ -1
SMNDC1-205ENST00000477763 ELOAQ14241 798 aaKnown RBP8.8□□□□□ -1
SMNDC1-205ENST00000477763 PRICKLE2Q7Z3G6 844 aa8.8□□□□□ -1
SMNDC1-205ENST00000477763 SERTAD1Q9UHV2 236 aa8.8□□□□□ -1
SMNDC1-205ENST00000477763 EPHA4P54764 986 aa8.79□□□□□ -1
SMNDC1-205ENST00000477763 PTSQ03393 145 aa8.79□□□□□ -1
SMNDC1-205ENST00000477763 GNASQ5JWF2 1037 aa8.79□□□□□ -1
SMNDC1-205ENST00000477763 TMEM214Q6NUQ4 689 aaKnown RBP8.79□□□□□ -1
SMNDC1-205ENST00000477763 NBPF10Q6P3W6 841 aaKnown RBP8.79□□□□□ -1
SMNDC1-205ENST00000477763 TAS1R3Q7RTX0 852 aa8.79□□□□□ -1
SMNDC1-205ENST00000477763 NBPF15Q8N660 670 aa8.79□□□□□ -1
SMNDC1-205ENST00000477763 RHBDD1Q8TEB9 315 aa8.79□□□□□ -1
SMNDC1-205ENST00000477763 DPYDQ12882 1025 aa8.78□□□□□ -1
SMNDC1-205ENST00000477763 SCHIP1Q9P0W5 487 aaPredicted RBP8.78□□□□□ -1
SMNDC1-205ENST00000477763 IQSEC3Q9UPP2 1182 aaPredicted RBP8.78□□□□□ -1
SMNDC1-205ENST00000477763 SLC35F4A4IF30 521 aa8.77□□□□□ -1.01
SMNDC1-205ENST00000477763 SFI1A8K8P3 1242 aa8.77□□□□□ -1.01
SMNDC1-205ENST00000477763 FOXK2Q01167 660 aa8.77□□□□□ -1.01
SMNDC1-205ENST00000477763 POU4F2Q12837 409 aa8.77□□□□□ -1.01
SMNDC1-205ENST00000477763 CDCA8Q53HL2 280 aa8.77□□□□□ -1.01
SMNDC1-205ENST00000477763 HOMEZQ8IX15 550 aa8.77□□□□□ -1.01
SMNDC1-205ENST00000477763 ZSCAN1Q8NBB4 408 aa8.77□□□□□ -1.01
SMNDC1-205ENST00000477763 SENP3-EIF4A1A0A087X0R7 540 aa8.76□□□□□ -1.01
SMNDC1-205ENST00000477763 ZNF295-AS1Q8N0V1 137 aa8.76□□□□□ -1.01
SMNDC1-205ENST00000477763 FAM200AQ8TCP9 573 aa8.76□□□□□ -1.01
SMNDC1-205ENST00000477763 NIFKQ9BYG3 293 aaKnown RBP8.76□□□□□ -1.01
SMNDC1-205ENST00000477763 NOVA2Q9UNW9 492 aaKnown RBP8.76□□□□□ -1.01
SMNDC1-205ENST00000477763 DYRK1BQ9Y463 629 aa8.76□□□□□ -1.01
SMNDC1-205ENST00000477763 RHOQP17081 205 aa8.75□□□□□ -1.01
SMNDC1-205ENST00000477763 C4orf17Q53FE4 359 aa8.75□□□□□ -1.01
SMNDC1-205ENST00000477763 TNS4Q8IZW8 715 aa8.75□□□□□ -1.01
SMNDC1-205ENST00000477763 VSIG8P0DPA2 414 aa8.74□□□□□ -1.01
SMNDC1-205ENST00000477763 CCDC155Q8N6L0 562 aa8.74□□□□□ -1.01
SMNDC1-205ENST00000477763 TSEN2Q8NCE0 465 aaKnown RBP8.74□□□□□ -1.01
SMNDC1-205ENST00000477763 ZMIZ1Q9ULJ6 1067 aa8.74□□□□□ -1.01
SMNDC1-205ENST00000477763 PPFIA3O75145 1194 aa8.73□□□□□ -1.01
SMNDC1-205ENST00000477763 SLC9A9Q8IVB4 645 aa8.73□□□□□ -1.01
SMNDC1-205ENST00000477763 GAS2L2Q8NHY3 880 aa8.73□□□□□ -1.01
SMNDC1-205ENST00000477763 TIMMDC1Q9NPL8 285 aa8.73□□□□□ -1.01
SMNDC1-205ENST00000477763 A0A1B0GTH6 734 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms