RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 TNS3Q68CZ2 1445 aa9.39□□□□□ -0.91
LINC00173-202ENST00000477702 ADGRB2O60241 1585 aa9.38□□□□□ -0.91
LINC00173-202ENST00000477702 SPATA31A5Q5VU36 1347 aa9.38□□□□□ -0.91
LINC00173-202ENST00000477702 SPATA31A7Q8IWB4 1347 aa9.38□□□□□ -0.91
LINC00173-202ENST00000477702 POTEMA6NI47 508 aa9.38□□□□□ -0.91
LINC00173-202ENST00000477702 FAM196AQ6ZSG2 479 aa9.38□□□□□ -0.91
LINC00173-202ENST00000477702 ANKRD13DQ6ZTN6 518 aa9.38□□□□□ -0.91
LINC00173-202ENST00000477702 TMUB1Q9BVT8 246 aa9.38□□□□□ -0.91
LINC00173-202ENST00000477702 RABGEF1Q9UJ41 708 aa9.38□□□□□ -0.91
LINC00173-202ENST00000477702 PARD3Q8TEW0 1356 aa9.37□□□□□ -0.91
LINC00173-202ENST00000477702 ADGRD1Q6QNK2 874 aa9.37□□□□□ -0.91
LINC00173-202ENST00000477702 GIGYF2Q6Y7W6 1299 aaKnown RBP9.37□□□□□ -0.91
LINC00173-202ENST00000477702 PRAG1Q86YV5 1406 aa9.37□□□□□ -0.91
LINC00173-202ENST00000477702 UTRNP46939 3433 aa9.36□□□□□ -0.91
LINC00173-202ENST00000477702 CLTCL1P53675 1640 aa9.36□□□□□ -0.91
LINC00173-202ENST00000477702 PSME1Q06323 249 aa9.36□□□□□ -0.91
LINC00173-202ENST00000477702 NUP188Q5SRE5 1749 aa9.36□□□□□ -0.91
LINC00173-202ENST00000477702 NRAPQ86VF7 1730 aa9.36□□□□□ -0.91
LINC00173-202ENST00000477702 PLEKHH1Q9ULM0 1364 aa9.36□□□□□ -0.91
LINC00173-202ENST00000477702 BHMG1C9JSJ3 638 aaPredicted RBP9.35□□□□□ -0.91
LINC00173-202ENST00000477702 ZBTB7AO95365 584 aa9.35□□□□□ -0.91
LINC00173-202ENST00000477702 MS4A1P11836 297 aa9.35□□□□□ -0.91
LINC00173-202ENST00000477702 ABCA3Q99758 1704 aa9.35□□□□□ -0.91
LINC00173-202ENST00000477702 FAM117AQ9C073 453 aa9.35□□□□□ -0.91
LINC00173-202ENST00000477702 PDGFDQ9GZP0 370 aaPredicted RBP9.35□□□□□ -0.91
LINC00173-202ENST00000477702 THSD7AQ9UPZ6 1657 aa9.35□□□□□ -0.91
LINC00173-202ENST00000477702 TK2O00142 265 aa9.34□□□□□ -0.91
LINC00173-202ENST00000477702 GIGYF1O75420 1035 aaPredicted RBP9.34□□□□□ -0.91
LINC00173-202ENST00000477702 GPCPD1Q9NPB8 672 aa9.34□□□□□ -0.91
LINC00173-202ENST00000477702 RREB1Q92766 1687 aa9.34□□□□□ -0.91
LINC00173-202ENST00000477702 ARHGEF10O15013 1369 aa9.34□□□□□ -0.91
LINC00173-202ENST00000477702 NRKQ7Z2Y5 1582 aa9.33□□□□□ -0.92
LINC00173-202ENST00000477702 KIF1AQ12756 1690 aa9.33□□□□□ -0.92
LINC00173-202ENST00000477702 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.33□□□□□ -0.92
LINC00173-202ENST00000477702 LOC105371045A0A1W2PR82 267 aa9.33□□□□□ -0.92
LINC00173-202ENST00000477702 HRO43593 1189 aa9.33□□□□□ -0.92
LINC00173-202ENST00000477702 DNAJB2P25686 324 aa9.33□□□□□ -0.92
LINC00173-202ENST00000477702 CLCN1P35523 988 aa9.33□□□□□ -0.92
LINC00173-202ENST00000477702 CDAN1Q8IWY9 1227 aa9.33□□□□□ -0.92
LINC00173-202ENST00000477702 IL27Q8NEV9 243 aa9.33□□□□□ -0.92
LINC00173-202ENST00000477702 SBNO1A3KN83 1393 aa9.33□□□□□ -0.92
LINC00173-202ENST00000477702 FMN2Q9NZ56 1722 aa9.32□□□□□ -0.92
LINC00173-202ENST00000477702 PDE3BQ13370 1112 aa9.32□□□□□ -0.92
LINC00173-202ENST00000477702 PMFBP1Q8TBY8 1022 aa9.32□□□□□ -0.92
LINC00173-202ENST00000477702 FHDC1Q9C0D6 1143 aaPredicted RBP9.32□□□□□ -0.92
LINC00173-202ENST00000477702 TMEM134Q9H6X4 195 aa9.32□□□□□ -0.92
LINC00173-202ENST00000477702 STRN4Q9NRL3 753 aa9.32□□□□□ -0.92
LINC00173-202ENST00000477702 USP35Q9P2H5 1018 aa9.32□□□□□ -0.92
LINC00173-202ENST00000477702 SPATA31A1Q5TZJ5 1347 aa9.31□□□□□ -0.92
LINC00173-202ENST00000477702 SSTR3P32745 418 aaPredicted RBP9.31□□□□□ -0.92
LINC00173-202ENST00000477702 ITGAEP38570 1179 aa9.31□□□□□ -0.92
LINC00173-202ENST00000477702 SWT1Q5T5J6 900 aaKnown RBP9.31□□□□□ -0.92
LINC00173-202ENST00000477702 TMEM132EQ6IEE7 984 aa9.31□□□□□ -0.92
LINC00173-202ENST00000477702 SYT17Q9BSW7 474 aa9.31□□□□□ -0.92
LINC00173-202ENST00000477702 PRDM11Q9NQV5 511 aa9.31□□□□□ -0.92
LINC00173-202ENST00000477702 FAM217BQ9NTX9 383 aaPredicted RBP9.31□□□□□ -0.92
LINC00173-202ENST00000477702 COL14A1Q05707 1796 aaKnown RBP9.31□□□□□ -0.92
LINC00173-202ENST00000477702 MYOM1P52179 1685 aa9.3□□□□□ -0.92
LINC00173-202ENST00000477702 CHRNA2Q15822 529 aa9.3□□□□□ -0.92
LINC00173-202ENST00000477702 DAXXQ9UER7 740 aaPredicted RBP9.3□□□□□ -0.92
LINC00173-202ENST00000477702 RGPD8O14715 1765 aaPredicted RBP9.29□□□□□ -0.92
LINC00173-202ENST00000477702 KIF1BO60333 1816 aa9.29□□□□□ -0.92
LINC00173-202ENST00000477702 PLEKHG3A1L390 1219 aa9.29□□□□□ -0.92
LINC00173-202ENST00000477702 NBPF3Q9H094 633 aa9.29□□□□□ -0.92
LINC00173-202ENST00000477702 TECPR2O15040 1411 aa9.29□□□□□ -0.92
LINC00173-202ENST00000477702 RRBP1Q9P2E9 1410 aaKnown RBP9.29□□□□□ -0.92
LINC00173-202ENST00000477702 ADGRF5Q8IZF2 1346 aa9.29□□□□□ -0.92
LINC00173-202ENST00000477702 NRXN1Q9ULB1 1477 aa9.28□□□□□ -0.92
LINC00173-202ENST00000477702 ROCK1Q13464 1354 aa9.28□□□□□ -0.92
LINC00173-202ENST00000477702 SAFB2Q14151 953 aaKnown RBP eCLIP9.28□□□□□ -0.92
LINC00173-202ENST00000477702 SAMD7Q7Z3H4 446 aa9.28□□□□□ -0.92
LINC00173-202ENST00000477702 MRPL50Q8N5N7 158 aaKnown RBP9.28□□□□□ -0.92
LINC00173-202ENST00000477702 CHD4Q14839 1912 aa9.28□□□□□ -0.92
LINC00173-202ENST00000477702 RPGRIP1LQ68CZ1 1315 aa9.28□□□□□ -0.92
LINC00173-202ENST00000477702 DDX11L8A8MPP1 907 aa9.27□□□□□ -0.93
LINC00173-202ENST00000477702 ZFRQ96KR1 1074 aaKnown RBP9.27□□□□□ -0.93
LINC00173-202ENST00000477702 CASZ1Q86V15 1759 aa9.27□□□□□ -0.93
LINC00173-202ENST00000477702 KIAA0232Q92628 1395 aa9.26□□□□□ -0.93
LINC00173-202ENST00000477702 ABCC11Q96J66 1382 aa9.26□□□□□ -0.93
LINC00173-202ENST00000477702 GPR162Q16538 588 aa9.26□□□□□ -0.93
LINC00173-202ENST00000477702 PTF1AQ7RTS3 328 aa9.26□□□□□ -0.93
LINC00173-202ENST00000477702 LAPTM4BQ86VI4 370 aa9.26□□□□□ -0.93
LINC00173-202ENST00000477702 EVA1CP58658 441 aa9.25□□□□□ -0.93
LINC00173-202ENST00000477702 ZC3H6P61129 1189 aaKnown RBP9.25□□□□□ -0.93
LINC00173-202ENST00000477702 BEGAINQ9BUH8 593 aa9.25□□□□□ -0.93
LINC00173-202ENST00000477702 IFT172Q9UG01 1749 aa9.25□□□□□ -0.93
LINC00173-202ENST00000477702 PPLO60437 1756 aa9.24□□□□□ -0.93
LINC00173-202ENST00000477702 SLC10A3P09131 477 aa9.24□□□□□ -0.93
LINC00173-202ENST00000477702 LARP1Q6PKG0 1096 aaKnown RBP9.24□□□□□ -0.93
LINC00173-202ENST00000477702 GPRASP1Q5JY77 1395 aa9.24□□□□□ -0.93
LINC00173-202ENST00000477702 YTHDC2Q9H6S0 1430 aaKnown RBP9.23□□□□□ -0.93
LINC00173-202ENST00000477702 TRPM3Q9HCF6 1732 aaPredicted RBP9.23□□□□□ -0.93
LINC00173-202ENST00000477702 DLC1Q96QB1 1528 aa9.23□□□□□ -0.93
LINC00173-202ENST00000477702 RNF40O75150 1001 aa9.23□□□□□ -0.93
LINC00173-202ENST00000477702 CD46P15529 392 aa9.23□□□□□ -0.93
LINC00173-202ENST00000477702 TMEM132AQ24JP5 1023 aa9.23□□□□□ -0.93
LINC00173-202ENST00000477702 RGL3Q3MIN7 710 aa9.23□□□□□ -0.93
LINC00173-202ENST00000477702 ACIN1Q9UKV3 1341 aaKnown RBP9.23□□□□□ -0.93
LINC00173-202ENST00000477702 PLSCR1O15162 318 aa9.22□□□□□ -0.93
LINC00173-202ENST00000477702 NUTM2GQ5VZR2 741 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms