RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 ATP6V1AP38606 617 aa15.56■□□□□ 0.08
HDLBP-236ENST00000477477 PLEKHO1Q53GL0 409 aaPredicted RBP15.56■□□□□ 0.08
HDLBP-236ENST00000477477 KDRP35968 1356 aa15.56■□□□□ 0.08
HDLBP-236ENST00000477477 ERVV-2B6SEH9 535 aa15.55■□□□□ 0.08
HDLBP-236ENST00000477477 GNPATO15228 680 aa15.55■□□□□ 0.08
HDLBP-236ENST00000477477 GRIN3BO60391 1043 aa15.55■□□□□ 0.08
HDLBP-236ENST00000477477 DCAF5Q96JK2 942 aa15.55■□□□□ 0.08
HDLBP-236ENST00000477477 KNSTRNQ9Y448 316 aa15.55■□□□□ 0.08
HDLBP-236ENST00000477477 KDM6AO15550 1401 aaPredicted RBP15.54■□□□□ 0.08
HDLBP-236ENST00000477477 AMOTQ4VCS5 1084 aa15.54■□□□□ 0.08
HDLBP-236ENST00000477477 ZNF530Q6P9A1 599 aaPredicted RBP15.54■□□□□ 0.08
HDLBP-236ENST00000477477 AEBP1Q8IUX7 1158 aa15.54■□□□□ 0.08
HDLBP-236ENST00000477477 AMER1Q5JTC6 1135 aaPredicted RBP15.52■□□□□ 0.08
HDLBP-236ENST00000477477 SLC4A9Q96Q91 983 aa15.52■□□□□ 0.08
HDLBP-236ENST00000477477 KIF7Q2M1P5 1343 aa15.51■□□□□ 0.07
HDLBP-236ENST00000477477 IL13P35225 146 aa15.51■□□□□ 0.07
HDLBP-236ENST00000477477 SULT6B1Q6IMI4 303 aa15.51■□□□□ 0.07
HDLBP-236ENST00000477477 RBM42Q9BTD8 480 aaKnown RBP15.51■□□□□ 0.07
HDLBP-236ENST00000477477 MTHFSP49914 203 aa15.5■□□□□ 0.07
HDLBP-236ENST00000477477 CABP4P57796 275 aa15.5■□□□□ 0.07
HDLBP-236ENST00000477477 C1orf141Q5JVX7 400 aa15.5■□□□□ 0.07
HDLBP-236ENST00000477477 RTCBQ9Y3I0 505 aaKnown RBP15.5■□□□□ 0.07
HDLBP-236ENST00000477477 ZNF831Q5JPB2 1677 aa15.5■□□□□ 0.07
HDLBP-236ENST00000477477 CNTNAP4Q9C0A0 1308 aa15.49■□□□□ 0.07
HDLBP-236ENST00000477477 C1QTNF8P60827 252 aa15.49■□□□□ 0.07
HDLBP-236ENST00000477477 RC3H1Q5TC82 1133 aaKnown RBP15.49■□□□□ 0.07
HDLBP-236ENST00000477477 GIGYF1O75420 1035 aaPredicted RBP15.47■□□□□ 0.07
HDLBP-236ENST00000477477 MMP10P09238 476 aa15.47■□□□□ 0.07
HDLBP-236ENST00000477477 ADRA2BP18089 450 aa15.47■□□□□ 0.07
HDLBP-236ENST00000477477 TRAPPC3LQ5T215 181 aa15.47■□□□□ 0.07
HDLBP-236ENST00000477477 NFATC2IPQ8NCF5 419 aa15.46■□□□□ 0.07
HDLBP-236ENST00000477477 COL5A3P25940 1745 aaPredicted RBP15.46■□□□□ 0.06
HDLBP-236ENST00000477477 PTCD1O75127 700 aaKnown RBP15.45■□□□□ 0.06
HDLBP-236ENST00000477477 RPS6KA4O75676 772 aa15.45■□□□□ 0.06
HDLBP-236ENST00000477477 NLGN1Q8N2Q7 840 aa15.45■□□□□ 0.06
HDLBP-236ENST00000477477 ARHGEF1Q92888 912 aaKnown RBP15.45■□□□□ 0.06
HDLBP-236ENST00000477477 WWC3Q9ULE0 1092 aa15.45■□□□□ 0.06
HDLBP-236ENST00000477477 ATP10DQ9P241 1426 aa15.44■□□□□ 0.06
HDLBP-236ENST00000477477 SENP3-EIF4A1A0A087X0R7 540 aa15.44■□□□□ 0.06
HDLBP-236ENST00000477477 PER1O15534 1290 aaPredicted RBP15.44■□□□□ 0.06
HDLBP-236ENST00000477477 GYS1P13807 737 aa15.44■□□□□ 0.06
HDLBP-236ENST00000477477 AKAP4Q5JQC9 854 aa15.44■□□□□ 0.06
HDLBP-236ENST00000477477 ADCY9O60503 1353 aa15.44■□□□□ 0.06
HDLBP-236ENST00000477477 C10orf71Q711Q0 1435 aa15.43■□□□□ 0.06
HDLBP-236ENST00000477477 CICQ96RK0 1608 aaPredicted RBP15.43■□□□□ 0.06
HDLBP-236ENST00000477477 RFC4P35249 363 aa15.43■□□□□ 0.06
HDLBP-236ENST00000477477 CRKLP46109 303 aaKnown RBP15.43■□□□□ 0.06
HDLBP-236ENST00000477477 PXDNLA1KZ92 1463 aa15.43■□□□□ 0.06
HDLBP-236ENST00000477477 HMOX1P09601 288 aa15.42■□□□□ 0.06
HDLBP-236ENST00000477477 CC2D1BQ5T0F9 858 aaKnown RBP15.42■□□□□ 0.06
HDLBP-236ENST00000477477 MRC1P22897 1456 aa15.41■□□□□ 0.06
HDLBP-236ENST00000477477 SLC52A2Q9HAB3 445 aa15.41■□□□□ 0.06
HDLBP-236ENST00000477477 TJP1Q07157 1748 aa15.4■□□□□ 0.06
HDLBP-236ENST00000477477 SCN11AQ9UI33 1791 aa15.4■□□□□ 0.06
HDLBP-236ENST00000477477 DIAPH1O60610 1272 aaKnown RBP15.4■□□□□ 0.06
HDLBP-236ENST00000477477 TGFB2P61812 414 aa15.4■□□□□ 0.06
HDLBP-236ENST00000477477 LGR6Q9HBX8 967 aa15.4■□□□□ 0.06
HDLBP-236ENST00000477477 CCDC87Q9NVE4 849 aa15.4■□□□□ 0.06
HDLBP-236ENST00000477477 KIF13BQ9NQT8 1826 aa15.4■□□□□ 0.06
HDLBP-236ENST00000477477 MYH14Q7Z406 1995 aaKnown RBP15.4■□□□□ 0.06
HDLBP-236ENST00000477477 C4AP0C0L4 1744 aa15.4■□□□□ 0.06
HDLBP-236ENST00000477477 NPC1L1Q9UHC9 1359 aa15.39■□□□□ 0.05
HDLBP-236ENST00000477477 RNMTO43148 476 aaKnown RBP15.39■□□□□ 0.05
HDLBP-236ENST00000477477 PARP3Q9Y6F1 533 aa15.39■□□□□ 0.05
HDLBP-236ENST00000477477 KIAA1551Q9HCM1 1747 aa15.39■□□□□ 0.05
HDLBP-236ENST00000477477 USP42Q9H9J4 1324 aaKnown RBP15.39■□□□□ 0.05
HDLBP-236ENST00000477477 MTHFSDQ2M296 383 aaKnown RBP15.38■□□□□ 0.05
HDLBP-236ENST00000477477 INTS5Q6P9B9 1019 aaKnown RBP15.38■□□□□ 0.05
HDLBP-236ENST00000477477 GPBP1L1Q9HC44 474 aaPredicted RBP15.38■□□□□ 0.05
HDLBP-236ENST00000477477 SRP68Q9UHB9 627 aaKnown RBP15.38■□□□□ 0.05
HDLBP-236ENST00000477477 COL3A1P02461 1466 aaPredicted RBP15.38■□□□□ 0.05
HDLBP-236ENST00000477477 A0A0G2JLW4 131 aa15.37■□□□□ 0.05
HDLBP-236ENST00000477477 DNAJC10Q8IXB1 793 aa15.37■□□□□ 0.05
HDLBP-236ENST00000477477 ADAMTS7Q9UKP4 1686 aa15.36■□□□□ 0.05
HDLBP-236ENST00000477477 SLC39A6Q13433 755 aa15.36■□□□□ 0.05
HDLBP-236ENST00000477477 FKBP8Q14318 412 aa15.36■□□□□ 0.05
HDLBP-236ENST00000477477 BCS1LQ9Y276 419 aa15.36■□□□□ 0.05
HDLBP-236ENST00000477477 KCPQ6ZWJ8 1503 aa15.36■□□□□ 0.05
HDLBP-236ENST00000477477 CYP19A1P11511 503 aaPredicted RBP15.35■□□□□ 0.05
HDLBP-236ENST00000477477 DPEP1P16444 411 aa15.35■□□□□ 0.05
HDLBP-236ENST00000477477 DDR1Q08345 913 aa15.35■□□□□ 0.05
HDLBP-236ENST00000477477 ZNF526Q8TF50 670 aaPredicted RBP15.35■□□□□ 0.05
HDLBP-236ENST00000477477 SOS1Q07889 1333 aaPredicted RBP15.35■□□□□ 0.05
HDLBP-236ENST00000477477 N4BP2Q86UW6 1770 aaPredicted RBP15.34■□□□□ 0.05
HDLBP-236ENST00000477477 U2SURPO15042 1029 aaKnown RBP15.33■□□□□ 0.04
HDLBP-236ENST00000477477 KCNA3P22001 575 aa15.33■□□□□ 0.04
HDLBP-236ENST00000477477 CNGB1Q14028 1251 aaPredicted RBP15.33■□□□□ 0.04
HDLBP-236ENST00000477477 USPL1Q5W0Q7 1092 aa15.33■□□□□ 0.04
HDLBP-236ENST00000477477 POLRMTO00411 1230 aaKnown RBP15.32■□□□□ 0.04
HDLBP-236ENST00000477477 ZPR1O75312 459 aa15.32■□□□□ 0.04
HDLBP-236ENST00000477477 FCHSD2O94868 740 aa15.32■□□□□ 0.04
HDLBP-236ENST00000477477 VSIG10Q8N0Z9 540 aa15.32■□□□□ 0.04
HDLBP-236ENST00000477477 ZBTB1Q9Y2K1 713 aa15.32■□□□□ 0.04
HDLBP-236ENST00000477477 COL15A1P39059 1388 aa15.32■□□□□ 0.04
HDLBP-236ENST00000477477 TM4SF1P30408 202 aa15.31■□□□□ 0.04
HDLBP-236ENST00000477477 GAS2L2Q8NHY3 880 aa15.31■□□□□ 0.04
HDLBP-236ENST00000477477 CEP350Q5VT06 3117 aa15.3■□□□□ 0.04
HDLBP-236ENST00000477477 ARHGAP27Q6ZUM4 889 aa15.3■□□□□ 0.04
HDLBP-236ENST00000477477 NARFQ9UHQ1 456 aa15.3■□□□□ 0.04
HDLBP-236ENST00000477477 BRCA1P38398 1863 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms