RNA–Protein interactions for RNA: ENST00000477221.2

FRMD4A-206, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-206ENST00000477221 ITPK1Q13572 414 aa13.49□□□□□ -0.25
FRMD4A-206ENST00000477221 RBM42Q9BTD8 480 aaKnown RBP13.49□□□□□ -0.25
FRMD4A-206ENST00000477221 ITGB4P16144 1822 aa13.48□□□□□ -0.25
FRMD4A-206ENST00000477221 C5P01031 1676 aa13.48□□□□□ -0.25
FRMD4A-206ENST00000477221 FLAD1Q8NFF5 587 aa13.48□□□□□ -0.25
FRMD4A-206ENST00000477221 TUBGCP6Q96RT7 1819 aa13.48□□□□□ -0.25
FRMD4A-206ENST00000477221 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.47□□□□□ -0.25
FRMD4A-206ENST00000477221 U2SURPO15042 1029 aaKnown RBP13.47□□□□□ -0.25
FRMD4A-206ENST00000477221 C4BP0C0L5 1744 aa13.47□□□□□ -0.25
FRMD4A-206ENST00000477221 QSER1Q2KHR3 1735 aa13.47□□□□□ -0.25
FRMD4A-206ENST00000477221 GNPATO15228 680 aa13.46□□□□□ -0.25
FRMD4A-206ENST00000477221 YY1P25490 414 aa13.46□□□□□ -0.25
FRMD4A-206ENST00000477221 AKAP4Q5JQC9 854 aa13.46□□□□□ -0.25
FRMD4A-206ENST00000477221 NFATC2IPQ8NCF5 419 aa13.46□□□□□ -0.25
FRMD4A-206ENST00000477221 SLC4A9Q96Q91 983 aa13.46□□□□□ -0.25
FRMD4A-206ENST00000477221 MAP3K5Q99683 1374 aa13.45□□□□□ -0.26
FRMD4A-206ENST00000477221 PTCD1O75127 700 aaKnown RBP13.45□□□□□ -0.26
FRMD4A-206ENST00000477221 MTHFSDQ2M296 383 aaKnown RBP13.45□□□□□ -0.26
FRMD4A-206ENST00000477221 LGR6Q9HBX8 967 aa13.45□□□□□ -0.26
FRMD4A-206ENST00000477221 COL3A1P02461 1466 aaPredicted RBP13.44□□□□□ -0.26
FRMD4A-206ENST00000477221 SSFA2P28290 1259 aa13.44□□□□□ -0.26
FRMD4A-206ENST00000477221 NLGN2Q8NFZ4 835 aa13.44□□□□□ -0.26
FRMD4A-206ENST00000477221 RNMTO43148 476 aaKnown RBP13.43□□□□□ -0.26
FRMD4A-206ENST00000477221 PELP1Q8IZL8 1130 aaKnown RBP13.43□□□□□ -0.26
FRMD4A-206ENST00000477221 TAF1LQ8IZX4 1826 aa13.42□□□□□ -0.26
FRMD4A-206ENST00000477221 GPR162Q16538 588 aa13.42□□□□□ -0.26
FRMD4A-206ENST00000477221 CFAP53Q96M91 514 aa13.42□□□□□ -0.26
FRMD4A-206ENST00000477221 SLC52A2Q9HAB3 445 aa13.42□□□□□ -0.26
FRMD4A-206ENST00000477221 PPP2R1AP30153 589 aa13.41□□□□□ -0.26
FRMD4A-206ENST00000477221 RTCBQ9Y3I0 505 aaKnown RBP13.41□□□□□ -0.26
FRMD4A-206ENST00000477221 SLC39A6Q13433 755 aa13.4□□□□□ -0.26
FRMD4A-206ENST00000477221 CNTNAP4Q9C0A0 1308 aa13.39□□□□□ -0.27
FRMD4A-206ENST00000477221 COL24A1Q17RW2 1714 aa13.39□□□□□ -0.27
FRMD4A-206ENST00000477221 TRAPPC3LQ5T215 181 aa13.39□□□□□ -0.27
FRMD4A-206ENST00000477221 RC3H1Q5TC82 1133 aaKnown RBP13.39□□□□□ -0.27
FRMD4A-206ENST00000477221 RPS6KA4O75676 772 aa13.38□□□□□ -0.27
FRMD4A-206ENST00000477221 PRKAR2BP31323 418 aa13.38□□□□□ -0.27
FRMD4A-206ENST00000477221 CRKLP46109 303 aaKnown RBP13.38□□□□□ -0.27
FRMD4A-206ENST00000477221 GAS2L2Q8NHY3 880 aa13.38□□□□□ -0.27
FRMD4A-206ENST00000477221 ARHGEF1Q92888 912 aaKnown RBP13.38□□□□□ -0.27
FRMD4A-206ENST00000477221 NUDCQ9Y266 331 aa13.38□□□□□ -0.27
FRMD4A-206ENST00000477221 UBR3Q6ZT12 1888 aa13.38□□□□□ -0.27
FRMD4A-206ENST00000477221 U2AF1L5P0DN76 240 aaPredicted RBP13.37□□□□□ -0.27
FRMD4A-206ENST00000477221 RFC4P35249 363 aa13.37□□□□□ -0.27
FRMD4A-206ENST00000477221 U2AF1Q01081 240 aaKnown RBP eCLIP13.37□□□□□ -0.27
FRMD4A-206ENST00000477221 DNAJC10Q8IXB1 793 aa13.37□□□□□ -0.27
FRMD4A-206ENST00000477221 PHACTR3Q96KR7 559 aa13.37□□□□□ -0.27
FRMD4A-206ENST00000477221 RSPH6AQ9H0K4 717 aa13.37□□□□□ -0.27
FRMD4A-206ENST00000477221 CD2APQ9Y5K6 639 aa13.37□□□□□ -0.27
FRMD4A-206ENST00000477221 MRC1P22897 1456 aa13.36□□□□□ -0.27
FRMD4A-206ENST00000477221 GNAT3A8MTJ3 354 aa13.36□□□□□ -0.27
FRMD4A-206ENST00000477221 MMP10P09238 476 aa13.36□□□□□ -0.27
FRMD4A-206ENST00000477221 YBX3P16989 372 aaKnown RBP eCLIP13.35□□□□□ -0.27
FRMD4A-206ENST00000477221 ADRA2BP18089 450 aa13.35□□□□□ -0.27
FRMD4A-206ENST00000477221 TEFQ10587 303 aa13.35□□□□□ -0.27
FRMD4A-206ENST00000477221 IL17REQ8NFR9 667 aa13.35□□□□□ -0.27
FRMD4A-206ENST00000477221 WWC3Q9ULE0 1092 aa13.35□□□□□ -0.27
FRMD4A-206ENST00000477221 GYS1P13807 737 aa13.34□□□□□ -0.27
FRMD4A-206ENST00000477221 INTS5Q6P9B9 1019 aaKnown RBP13.34□□□□□ -0.27
FRMD4A-206ENST00000477221 NLGN1Q8N2Q7 840 aa13.34□□□□□ -0.27
FRMD4A-206ENST00000477221 CCDC87Q9NVE4 849 aa13.34□□□□□ -0.27
FRMD4A-206ENST00000477221 SRP68Q9UHB9 627 aaKnown RBP13.34□□□□□ -0.27
FRMD4A-206ENST00000477221 SCN11AQ9UI33 1791 aa13.34□□□□□ -0.27
FRMD4A-206ENST00000477221 ZNF831Q5JPB2 1677 aa13.34□□□□□ -0.27
FRMD4A-206ENST00000477221 CYP19A1P11511 503 aaPredicted RBP13.33□□□□□ -0.28
FRMD4A-206ENST00000477221 TTC5Q8N0Z6 440 aa13.33□□□□□ -0.28
FRMD4A-206ENST00000477221 KCPQ6ZWJ8 1503 aa13.33□□□□□ -0.28
FRMD4A-206ENST00000477221 COL5A3P25940 1745 aaPredicted RBP13.33□□□□□ -0.28
FRMD4A-206ENST00000477221 FCHSD2O94868 740 aa13.32□□□□□ -0.28
FRMD4A-206ENST00000477221 TJP1Q07157 1748 aa13.32□□□□□ -0.28
FRMD4A-206ENST00000477221 ADAMTS7Q9UKP4 1686 aa13.31□□□□□ -0.28
FRMD4A-206ENST00000477221 GRIN3BO60391 1043 aa13.31□□□□□ -0.28
FRMD4A-206ENST00000477221 ZBTB1Q9Y2K1 713 aa13.31□□□□□ -0.28
FRMD4A-206ENST00000477221 PARP3Q9Y6F1 533 aa13.31□□□□□ -0.28
FRMD4A-206ENST00000477221 USP42Q9H9J4 1324 aaKnown RBP13.31□□□□□ -0.28
FRMD4A-206ENST00000477221 DDX10Q13206 875 aaKnown RBP13.3□□□□□ -0.28
FRMD4A-206ENST00000477221 FKBP8Q14318 412 aa13.3□□□□□ -0.28
FRMD4A-206ENST00000477221 ZNF790Q6PG37 636 aa13.3□□□□□ -0.28
FRMD4A-206ENST00000477221 MCM10Q7L590 875 aa13.3□□□□□ -0.28
FRMD4A-206ENST00000477221 VSIG10Q8N0Z9 540 aa13.3□□□□□ -0.28
FRMD4A-206ENST00000477221 ZNF784Q8NCA9 323 aaPredicted RBP13.3□□□□□ -0.28
FRMD4A-206ENST00000477221 ZNF496Q96IT1 587 aaPredicted RBP13.3□□□□□ -0.28
FRMD4A-206ENST00000477221 CICQ96RK0 1608 aaPredicted RBP13.3□□□□□ -0.28
FRMD4A-206ENST00000477221 SOS1Q07889 1333 aaPredicted RBP13.3□□□□□ -0.28
FRMD4A-206ENST00000477221 CEMIPQ8WUJ3 1361 aa13.3□□□□□ -0.28
FRMD4A-206ENST00000477221 KCNQ3O43525 872 aa13.29□□□□□ -0.28
FRMD4A-206ENST00000477221 CANXP27824 592 aaKnown RBP13.29□□□□□ -0.28
FRMD4A-206ENST00000477221 DCTN1Q14203 1278 aa13.29□□□□□ -0.28
FRMD4A-206ENST00000477221 USPL1Q5W0Q7 1092 aa13.29□□□□□ -0.28
FRMD4A-206ENST00000477221 RTF1Q92541 710 aaKnown RBP13.29□□□□□ -0.28
FRMD4A-206ENST00000477221 BTBD11A6QL63 1104 aa13.28□□□□□ -0.28
FRMD4A-206ENST00000477221 ZPR1O75312 459 aa13.28□□□□□ -0.28
FRMD4A-206ENST00000477221 COL15A1P39059 1388 aa13.28□□□□□ -0.28
FRMD4A-206ENST00000477221 HEG1Q9ULI3 1381 aa13.28□□□□□ -0.28
FRMD4A-206ENST00000477221 MYH14Q7Z406 1995 aaKnown RBP13.27□□□□□ -0.28
FRMD4A-206ENST00000477221 A0A0G2JLW4 131 aa13.27□□□□□ -0.29
FRMD4A-206ENST00000477221 STARD3NLO95772 234 aa13.27□□□□□ -0.29
FRMD4A-206ENST00000477221 DDR1Q08345 913 aa13.27□□□□□ -0.29
FRMD4A-206ENST00000477221 FMNL2Q96PY5 1086 aa13.27□□□□□ -0.29
FRMD4A-206ENST00000477221 ZNF330Q9Y3S2 320 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms