RNA–Protein interactions for RNA: ENST00000476970.1

PRPF3-205, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 1,005 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-205ENST00000476970 ZC3H4Q9UPT8 1303 aaKnown RBP10.5□□□□□ -0.73
PRPF3-205ENST00000476970 TATP17735 454 aaPredicted RBP10.49□□□□□ -0.73
PRPF3-205ENST00000476970 HOXC9P31274 260 aa10.49□□□□□ -0.73
PRPF3-205ENST00000476970 AMPHP49418 695 aa10.49□□□□□ -0.73
PRPF3-205ENST00000476970 MPRIPQ6WCQ1 1025 aa10.49□□□□□ -0.73
PRPF3-205ENST00000476970 A0A0G2JLW4 131 aa10.48□□□□□ -0.73
PRPF3-205ENST00000476970 GNPATO15228 680 aa10.48□□□□□ -0.73
PRPF3-205ENST00000476970 SLC4A2P04920 1241 aa10.48□□□□□ -0.73
PRPF3-205ENST00000476970 AMIGO3Q86WK7 504 aa10.48□□□□□ -0.73
PRPF3-205ENST00000476970 RRAGCQ9HB90 399 aa10.48□□□□□ -0.73
PRPF3-205ENST00000476970 TERF2IPQ9NYB0 399 aa10.48□□□□□ -0.73
PRPF3-205ENST00000476970 RNF181Q9P0P0 153 aa10.48□□□□□ -0.73
PRPF3-205ENST00000476970 ROCK2O75116 1388 aaKnown RBP10.48□□□□□ -0.73
PRPF3-205ENST00000476970 DPEP1P16444 411 aa10.47□□□□□ -0.73
PRPF3-205ENST00000476970 NLGN1Q8N2Q7 840 aa10.47□□□□□ -0.73
PRPF3-205ENST00000476970 TMC1Q8TDI8 760 aa10.47□□□□□ -0.73
PRPF3-205ENST00000476970 MAP3K19Q56UN5 1328 aa10.47□□□□□ -0.73
PRPF3-205ENST00000476970 LOC102724428A0A0B4J2F2 783 aa10.46□□□□□ -0.73
PRPF3-205ENST00000476970 SIK1P57059 783 aa10.46□□□□□ -0.73
PRPF3-205ENST00000476970 COG3Q96JB2 828 aa10.46□□□□□ -0.73
PRPF3-205ENST00000476970 PIM2Q9P1W9 311 aa10.46□□□□□ -0.73
PRPF3-205ENST00000476970 A0A1W2PP64 1363 aa10.46□□□□□ -0.74
PRPF3-205ENST00000476970 TIAM2Q8IVF5 1701 aa10.46□□□□□ -0.74
PRPF3-205ENST00000476970 TMF1P82094 1093 aa10.45□□□□□ -0.74
PRPF3-205ENST00000476970 DALRD3Q5D0E6 543 aaKnown RBP10.45□□□□□ -0.74
PRPF3-205ENST00000476970 LINC00116Q8NCU8 138 aa10.45□□□□□ -0.74
PRPF3-205ENST00000476970 DCAF5Q96JK2 942 aa10.45□□□□□ -0.74
PRPF3-205ENST00000476970 SPINK5Q9NQ38 1064 aaPredicted RBP10.45□□□□□ -0.74
PRPF3-205ENST00000476970 PARP3Q9Y6F1 533 aa10.45□□□□□ -0.74
PRPF3-205ENST00000476970 ZNF831Q5JPB2 1677 aa10.44□□□□□ -0.74
PRPF3-205ENST00000476970 VEGFAP15692 232 aaPredicted RBP10.44□□□□□ -0.74
PRPF3-205ENST00000476970 NBPF6Q5VWK0 638 aa10.44□□□□□ -0.74
PRPF3-205ENST00000476970 SMIM5Q71RC9 77 aa10.44□□□□□ -0.74
PRPF3-205ENST00000476970 NBPF4Q96M43 638 aa10.44□□□□□ -0.74
PRPF3-205ENST00000476970 PRDM10Q9NQV6 1147 aa10.44□□□□□ -0.74
PRPF3-205ENST00000476970 CCDC88AQ3V6T2 1871 aa10.43□□□□□ -0.74
PRPF3-205ENST00000476970 TRAPPC3LQ5T215 181 aa10.43□□□□□ -0.74
PRPF3-205ENST00000476970 USHBP1Q8N6Y0 703 aa10.43□□□□□ -0.74
PRPF3-205ENST00000476970 PIGBQ92521 554 aa10.43□□□□□ -0.74
PRPF3-205ENST00000476970 AIDAQ96BJ3 306 aa10.43□□□□□ -0.74
PRPF3-205ENST00000476970 RTCBQ9Y3I0 505 aaKnown RBP10.43□□□□□ -0.74
PRPF3-205ENST00000476970 COL5A3P25940 1745 aaPredicted RBP10.43□□□□□ -0.74
PRPF3-205ENST00000476970 CYP27B1O15528 508 aa10.42□□□□□ -0.74
PRPF3-205ENST00000476970 ATP6V1AP38606 617 aa10.42□□□□□ -0.74
PRPF3-205ENST00000476970 TMOD3Q9NYL9 352 aa10.42□□□□□ -0.74
PRPF3-205ENST00000476970 KDM6AO15550 1401 aaPredicted RBP10.41□□□□□ -0.74
PRPF3-205ENST00000476970 GLTPD2A6NH11 291 aa10.41□□□□□ -0.74
PRPF3-205ENST00000476970 CTCFP49711 727 aaPredicted RBP10.41□□□□□ -0.74
PRPF3-205ENST00000476970 FAM161AQ3B820 660 aa10.41□□□□□ -0.74
PRPF3-205ENST00000476970 SLC12A5Q9H2X9 1139 aa10.41□□□□□ -0.74
PRPF3-205ENST00000476970 CREBZFQ9NS37 354 aa10.41□□□□□ -0.74
PRPF3-205ENST00000476970 DLEC1Q9Y238 1755 aa10.4□□□□□ -0.74
PRPF3-205ENST00000476970 FOXN1O15353 648 aa10.4□□□□□ -0.74
PRPF3-205ENST00000476970 RFC4P35249 363 aa10.4□□□□□ -0.74
PRPF3-205ENST00000476970 ITPK1Q13572 414 aa10.4□□□□□ -0.74
PRPF3-205ENST00000476970 INSRP06213 1382 aa10.39□□□□□ -0.75
PRPF3-205ENST00000476970 FLT4P35916 1363 aa10.39□□□□□ -0.75
PRPF3-205ENST00000476970 KIF24Q5T7B8 1368 aa10.39□□□□□ -0.75
PRPF3-205ENST00000476970 DICER1Q9UPY3 1922 aaKnown RBP10.39□□□□□ -0.75
PRPF3-205ENST00000476970 GYS1P13807 737 aa10.39□□□□□ -0.75
PRPF3-205ENST00000476970 LMNB1P20700 586 aa10.39□□□□□ -0.75
PRPF3-205ENST00000476970 KCNA3P22001 575 aa10.39□□□□□ -0.75
PRPF3-205ENST00000476970 NKX1-1Q15270 411 aaPredicted RBP10.39□□□□□ -0.75
PRPF3-205ENST00000476970 PUS7Q96PZ0 661 aaKnown RBP10.39□□□□□ -0.75
PRPF3-205ENST00000476970 SPG7Q9UQ90 795 aa10.39□□□□□ -0.75
PRPF3-205ENST00000476970 KIF20BQ96Q89 1820 aa10.39□□□□□ -0.75
PRPF3-205ENST00000476970 KDRP35968 1356 aa10.39□□□□□ -0.75
PRPF3-205ENST00000476970 CNTNAP4Q9C0A0 1308 aa10.38□□□□□ -0.75
PRPF3-205ENST00000476970 VIRMAQ69YN4 1812 aaKnown RBP10.38□□□□□ -0.75
PRPF3-205ENST00000476970 L3MBTL2Q969R5 705 aa10.38□□□□□ -0.75
PRPF3-205ENST00000476970 MKRN1Q9UHC7 482 aaKnown RBP10.38□□□□□ -0.75
PRPF3-205ENST00000476970 CNTNAP1P78357 1384 aa10.38□□□□□ -0.75
PRPF3-205ENST00000476970 PDE4DIPQ5VU43 2346 aa10.38□□□□□ -0.75
PRPF3-205ENST00000476970 MYH14Q7Z406 1995 aaKnown RBP10.37□□□□□ -0.75
PRPF3-205ENST00000476970 MLLT1Q03111 559 aaPredicted RBP10.37□□□□□ -0.75
PRPF3-205ENST00000476970 RRS1Q15050 365 aaKnown RBP10.37□□□□□ -0.75
PRPF3-205ENST00000476970 RC3H1Q5TC82 1133 aaKnown RBP10.37□□□□□ -0.75
PRPF3-205ENST00000476970 ARHGEF1Q92888 912 aaKnown RBP10.37□□□□□ -0.75
PRPF3-205ENST00000476970 ASAP1Q9ULH1 1129 aa10.37□□□□□ -0.75
PRPF3-205ENST00000476970 NCAPD2Q15021 1401 aa10.36□□□□□ -0.75
PRPF3-205ENST00000476970 RASSF7Q02833 373 aa10.36□□□□□ -0.75
PRPF3-205ENST00000476970 DPY19L2Q6NUT2 758 aa10.36□□□□□ -0.75
PRPF3-205ENST00000476970 ABHD8Q96I13 439 aa10.36□□□□□ -0.75
PRPF3-205ENST00000476970 RPS6KA4O75676 772 aa10.35□□□□□ -0.75
PRPF3-205ENST00000476970 FBLN1P23142 703 aa10.35□□□□□ -0.75
PRPF3-205ENST00000476970 CHADLQ6NUI6 762 aa10.35□□□□□ -0.75
PRPF3-205ENST00000476970 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.35□□□□□ -0.752e-10■■□□□ 13.3
PRPF3-205ENST00000476970 ANKRD26Q9UPS8 1709 aa10.35□□□□□ -0.75
PRPF3-205ENST00000476970 AFDNP55196 1824 aaKnown RBP10.35□□□□□ -0.75
PRPF3-205ENST00000476970 CHRNA5P30532 468 aa10.34□□□□□ -0.75
PRPF3-205ENST00000476970 HSP90AB2PQ58FF8 381 aa10.34□□□□□ -0.75
PRPF3-205ENST00000476970 IFNL2Q8IZJ0 200 aa10.34□□□□□ -0.75
PRPF3-205ENST00000476970 ATG3Q9NT62 314 aa10.34□□□□□ -0.75
PRPF3-205ENST00000476970 SCN4AP35499 1836 aa10.33□□□□□ -0.76
PRPF3-205ENST00000476970 LBX1P52954 281 aa10.33□□□□□ -0.76
PRPF3-205ENST00000476970 RBM42Q9BTD8 480 aaKnown RBP10.33□□□□□ -0.76
PRPF3-205ENST00000476970 CARD11Q9BXL7 1154 aa10.33□□□□□ -0.76
PRPF3-205ENST00000476970 USP42Q9H9J4 1324 aaKnown RBP10.33□□□□□ -0.76
PRPF3-205ENST00000476970 TONSLQ96HA7 1378 aa10.32□□□□□ -0.76
PRPF3-205ENST00000476970 DDR1Q08345 913 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms