RNA–Protein interactions for RNA: ENST00000476935.5

GNAS-233, Transcript of GNAS complex locus, human

TSL 3

Gene GNAS, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GNAS-233	ENST00000476935	AK7	Q96M32	723 aa		32.05	■■■□□ 2.72
GNAS-233	ENST00000476935	ATP6V1A	P38606	617 aa		32.04	■■■□□ 2.72
GNAS-233	ENST00000476935	AKAP4	Q5JQC9	854 aa		32.04	■■■□□ 2.72
GNAS-233	ENST00000476935	SCN11A	Q9UI33	1791 aa		32.04	■■■□□ 2.72
GNAS-233	ENST00000476935	COL3A1	P02461	1466 aa	Predicted RBP	32.03	■■■□□ 2.72
GNAS-233	ENST00000476935	UBR3	Q6ZT12	1888 aa		32.03	■■■□□ 2.72
GNAS-233	ENST00000476935	MAP3K5	Q99683	1374 aa		32.03	■■■□□ 2.72
GNAS-233	ENST00000476935	ITPK1	Q13572	414 aa		32.02	■■■□□ 2.72
GNAS-233	ENST00000476935	LINC00116	Q8NCU8	138 aa		32.02	■■■□□ 2.72
GNAS-233	ENST00000476935	ZNF831	Q5JPB2	1677 aa		32.02	■■■□□ 2.72
GNAS-233	ENST00000476935	NFATC2IP	Q8NCF5	419 aa		32	■■■□□ 2.71
GNAS-233	ENST00000476935	SSFA2	P28290	1259 aa		31.97	■■■□□ 2.71
GNAS-233	ENST00000476935	CFAP53	Q96M91	514 aa		31.97	■■■□□ 2.71
GNAS-233	ENST00000476935	RBM42	Q9BTD8	480 aa	Known RBP	31.97	■■■□□ 2.71
GNAS-233	ENST00000476935	VIRMA	Q69YN4	1812 aa	Known RBP	31.97	■■■□□ 2.71
GNAS-233	ENST00000476935	U2SURP	O15042	1029 aa	Known RBP	31.96	■■■□□ 2.71
GNAS-233	ENST00000476935	SLC4A9	Q96Q91	983 aa		31.96	■■■□□ 2.71
GNAS-233	ENST00000476935	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	31.95	■■■□□ 2.71
GNAS-233	ENST00000476935	MTHFSD	Q2M296	383 aa	Known RBP	31.95	■■■□□ 2.71
GNAS-233	ENST00000476935	AMIGO3	Q86WK7	504 aa		31.95	■■■□□ 2.71
GNAS-233	ENST00000476935	PPP2R1A	P30153	589 aa		31.93	■■■□□ 2.7
GNAS-233	ENST00000476935	LGR6	Q9HBX8	967 aa		31.93	■■■□□ 2.7
GNAS-233	ENST00000476935	GNPAT	O15228	680 aa		31.92	■■■□□ 2.7
GNAS-233	ENST00000476935	RNMT	O43148	476 aa	Known RBP	31.92	■■■□□ 2.7
GNAS-233	ENST00000476935	PHF14	O94880	888 aa		31.92	■■■□□ 2.7
GNAS-233	ENST00000476935	MSL1	Q68DK7	614 aa		31.92	■■■□□ 2.7
GNAS-233	ENST00000476935	RC3H1	Q5TC82	1133 aa	Known RBP	31.91	■■■□□ 2.7
GNAS-233	ENST00000476935	SLC52A2	Q9HAB3	445 aa		31.91	■■■□□ 2.7
GNAS-233	ENST00000476935	COL5A3	P25940	1745 aa	Predicted RBP	31.9	■■■□□ 2.7
GNAS-233	ENST00000476935	SMIM5	Q71RC9	77 aa		31.9	■■■□□ 2.7
GNAS-233	ENST00000476935	NUDC	Q9Y266	331 aa		31.89	■■■□□ 2.7
GNAS-233	ENST00000476935	ADAMTS7	Q9UKP4	1686 aa		31.89	■■■□□ 2.7
GNAS-233	ENST00000476935	PTCD1	O75127	700 aa	Known RBP	31.88	■■■□□ 2.69
GNAS-233	ENST00000476935	KLHL34	Q8N239	644 aa		31.88	■■■□□ 2.69
GNAS-233	ENST00000476935	MRC1	P22897	1456 aa		31.87	■■■□□ 2.69
GNAS-233	ENST00000476935	CNTNAP4	Q9C0A0	1308 aa		31.87	■■■□□ 2.69
GNAS-233	ENST00000476935	RTCB	Q9Y3I0	505 aa	Known RBP	31.87	■■■□□ 2.69
GNAS-233	ENST00000476935	GAS2L2	Q8NHY3	880 aa		31.86	■■■□□ 2.69
GNAS-233	ENST00000476935	MYH14	Q7Z406	1995 aa	Known RBP	31.86	■■■□□ 2.69
GNAS-233	ENST00000476935	TRAPPC3L	Q5T215	181 aa		31.83	■■■□□ 2.69
GNAS-233	ENST00000476935	CIC	Q96RK0	1608 aa	Predicted RBP	31.82	■■■□□ 2.69
GNAS-233	ENST00000476935	RPS6KA4	O75676	772 aa		31.82	■■■□□ 2.68
GNAS-233	ENST00000476935	ADRA2B	P18089	450 aa		31.82	■■■□□ 2.68
GNAS-233	ENST00000476935	YY1	P25490	414 aa		31.82	■■■□□ 2.68
GNAS-233	ENST00000476935	RSPH6A	Q9H0K4	717 aa		31.82	■■■□□ 2.68
GNAS-233	ENST00000476935	GNAT3	A8MTJ3	354 aa		31.81	■■■□□ 2.68
GNAS-233	ENST00000476935	PRKAR2B	P31323	418 aa		31.79	■■■□□ 2.68
GNAS-233	ENST00000476935	TJP1	Q07157	1748 aa		31.79	■■■□□ 2.68
GNAS-233	ENST00000476935	NLGN2	Q8NFZ4	835 aa		31.79	■■■□□ 2.68
GNAS-233	ENST00000476935	CD2AP	Q9Y5K6	639 aa		31.79	■■■□□ 2.68
GNAS-233	ENST00000476935	U2AF1L5	P0DN76	240 aa	Predicted RBP	31.78	■■■□□ 2.68
GNAS-233	ENST00000476935	U2AF1	Q01081	240 aa	Known RBP eCLIP	31.78	■■■□□ 2.68
GNAS-233	ENST00000476935	SLC39A6	Q13433	755 aa		31.78	■■■□□ 2.68
GNAS-233	ENST00000476935	ARHGEF1	Q92888	912 aa	Known RBP	31.78	■■■□□ 2.68
GNAS-233	ENST00000476935	PHACTR3	Q96KR7	559 aa		31.78	■■■□□ 2.68
GNAS-233	ENST00000476935	CHD4	Q14839	1912 aa		31.77	■■■□□ 2.68
GNAS-233	ENST00000476935	FCHSD2	O94868	740 aa		31.77	■■■□□ 2.68
GNAS-233	ENST00000476935	CRKL	P46109	303 aa	Known RBP	31.77	■■■□□ 2.68
GNAS-233	ENST00000476935	GPR162	Q16538	588 aa		31.76	■■■□□ 2.67
GNAS-233	ENST00000476935	IL17RE	Q8NFR9	667 aa		31.76	■■■□□ 2.67
GNAS-233	ENST00000476935	NLGN1	Q8N2Q7	840 aa		31.74	■■■□□ 2.67
GNAS-233	ENST00000476935	RFC4	P35249	363 aa		31.73	■■■□□ 2.67
GNAS-233	ENST00000476935	TEF	Q10587	303 aa		31.73	■■■□□ 2.67
GNAS-233	ENST00000476935	KCP	Q6ZWJ8	1503 aa		31.72	■■■□□ 2.67
GNAS-233	ENST00000476935	DNAJC10	Q8IXB1	793 aa		31.72	■■■□□ 2.67
GNAS-233	ENST00000476935	UBR2	Q8IWV8	1755 aa		31.71	■■■□□ 2.67
GNAS-233	ENST00000476935	INTS5	Q6P9B9	1019 aa	Known RBP	31.71	■■■□□ 2.67
GNAS-233	ENST00000476935	VSIG10	Q8N0Z9	540 aa		31.71	■■■□□ 2.67
GNAS-233	ENST00000476935	SIPA1L3	O60292	1781 aa	Predicted RBP	31.71	■■■□□ 2.67
GNAS-233	ENST00000476935	CEMIP	Q8WUJ3	1361 aa		31.69	■■■□□ 2.66
GNAS-233	ENST00000476935	C4A	P0C0L4	1744 aa		31.69	■■■□□ 2.66
GNAS-233	ENST00000476935	MMP10	P09238	476 aa		31.68	■■■□□ 2.66
GNAS-233	ENST00000476935	CYP19A1	P11511	503 aa	Predicted RBP	31.68	■■■□□ 2.66
GNAS-233	ENST00000476935	GYS1	P13807	737 aa		31.68	■■■□□ 2.66
GNAS-233	ENST00000476935	TTC5	Q8N0Z6	440 aa		31.68	■■■□□ 2.66
GNAS-233	ENST00000476935	CCDC87	Q9NVE4	849 aa		31.68	■■■□□ 2.66
GNAS-233	ENST00000476935	PELP1	Q8IZL8	1130 aa	Known RBP	31.67	■■■□□ 2.66
GNAS-233	ENST00000476935	UTRN	P46939	3433 aa		31.66	■■■□□ 2.66
GNAS-233	ENST00000476935	DDX10	Q13206	875 aa	Known RBP	31.65	■■■□□ 2.66
GNAS-233	ENST00000476935	RALBP1	Q15311	655 aa		31.65	■■■□□ 2.66
GNAS-233	ENST00000476935	ZNF790	Q6PG37	636 aa		31.65	■■■□□ 2.66
GNAS-233	ENST00000476935	GRIN3B	O60391	1043 aa		31.62	■■■□□ 2.65
GNAS-233	ENST00000476935	RTF1	Q92541	710 aa	Known RBP	31.62	■■■□□ 2.65
GNAS-233	ENST00000476935	USP42	Q9H9J4	1324 aa	Known RBP	31.62	■■■□□ 2.65
GNAS-233	ENST00000476935	SOS1	Q07889	1333 aa	Predicted RBP	31.61	■■■□□ 2.65
GNAS-233	ENST00000476935	HTATSF1	O43719	755 aa	Known RBP	31.61	■■■□□ 2.65
GNAS-233	ENST00000476935	YBX3	P16989	372 aa	Known RBP eCLIP	31.61	■■■□□ 2.65	7e-8	■■□□□ 12.1
GNAS-233	ENST00000476935	ZNF496	Q96IT1	587 aa	Predicted RBP	31.61	■■■□□ 2.65
GNAS-233	ENST00000476935	KIF13B	Q9NQT8	1826 aa		31.61	■■■□□ 2.65
GNAS-233	ENST00000476935	STARD3NL	O95772	234 aa		31.6	■■■□□ 2.65
GNAS-233	ENST00000476935	TEX13A	Q9BXU3	409 aa	Predicted RBP	31.6	■■■□□ 2.65
GNAS-233	ENST00000476935	SRP68	Q9UHB9	627 aa	Known RBP	31.6	■■■□□ 2.65
GNAS-233	ENST00000476935	HEG1	Q9ULI3	1381 aa		31.59	■■■□□ 2.65
GNAS-233	ENST00000476935	NEFM	P07197	916 aa		31.59	■■■□□ 2.65
GNAS-233	ENST00000476935	BTBD11	A6QL63	1104 aa		31.58	■■■□□ 2.65
GNAS-233	ENST00000476935	ZBTB1	Q9Y2K1	713 aa		31.58	■■■□□ 2.65
GNAS-233	ENST00000476935	PARP3	Q9Y6F1	533 aa		31.58	■■■□□ 2.65
GNAS-233	ENST00000476935	GOLGB1	Q14789	3259 aa	Known RBP	31.58	■■■□□ 2.65
GNAS-233	ENST00000476935	FMNL2	Q96PY5	1086 aa		31.57	■■■□□ 2.64
GNAS-233	ENST00000476935	ZPR1	O75312	459 aa		31.56	■■■□□ 2.64

Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms