RNA–Protein interactions for RNA: ENST00000476825.2

SPTAN1-207, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 3

Gene SPTAN1, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-207ENST00000476825 NEFMP07197 916 aa12.03□□□□□ -0.48
SPTAN1-207ENST00000476825 MPRIPQ6WCQ1 1025 aa12.03□□□□□ -0.48
SPTAN1-207ENST00000476825 PTF1AQ7RTS3 328 aa12.03□□□□□ -0.48
SPTAN1-207ENST00000476825 IL17REQ8NFR9 667 aa12.03□□□□□ -0.48
SPTAN1-207ENST00000476825 LGR6Q9HBX8 967 aa12.03□□□□□ -0.48
SPTAN1-207ENST00000476825 TRIM35Q9UPQ4 493 aa12.03□□□□□ -0.48
SPTAN1-207ENST00000476825 RRP7AQ9Y3A4 280 aaKnown RBP12.03□□□□□ -0.48
SPTAN1-207ENST00000476825 QSER1Q2KHR3 1735 aa12.03□□□□□ -0.48
SPTAN1-207ENST00000476825 NCBP3Q53F19 620 aaKnown RBP12.02□□□□□ -0.49
SPTAN1-207ENST00000476825 ERVV-2B6SEH9 535 aa12.01□□□□□ -0.49
SPTAN1-207ENST00000476825 KCNQ2O43526 872 aa12.01□□□□□ -0.49
SPTAN1-207ENST00000476825 RIPK4P57078 832 aa12.01□□□□□ -0.49
SPTAN1-207ENST00000476825 DCTN1Q14203 1278 aa12.01□□□□□ -0.49
SPTAN1-207ENST00000476825 ACSBG1Q96GR2 724 aa12.01□□□□□ -0.49
SPTAN1-207ENST00000476825 CCDC27Q2M243 656 aa12□□□□□ -0.49
SPTAN1-207ENST00000476825 MCM10Q7L590 875 aa12□□□□□ -0.49
SPTAN1-207ENST00000476825 SLC52A2Q9HAB3 445 aa12□□□□□ -0.49
SPTAN1-207ENST00000476825 ZNF521Q96K83 1311 aa12□□□□□ -0.49
SPTAN1-207ENST00000476825 UBR3Q6ZT12 1888 aa12□□□□□ -0.49
SPTAN1-207ENST00000476825 MYH14Q7Z406 1995 aaKnown RBP11.99□□□□□ -0.49
SPTAN1-207ENST00000476825 SENP3-EIF4A1A0A087X0R7 540 aa11.99□□□□□ -0.49
SPTAN1-207ENST00000476825 TRIM37O94972 964 aa11.99□□□□□ -0.49
SPTAN1-207ENST00000476825 PRIM1P49642 420 aaKnown RBP11.99□□□□□ -0.49
SPTAN1-207ENST00000476825 LMOD3Q0VAK6 560 aa11.99□□□□□ -0.49
SPTAN1-207ENST00000476825 THUMPD2Q9BTF0 503 aaKnown RBP11.99□□□□□ -0.49
SPTAN1-207ENST00000476825 BCL11BQ9C0K0 894 aaPredicted RBP11.99□□□□□ -0.49
SPTAN1-207ENST00000476825 C4BP0C0L5 1744 aa11.99□□□□□ -0.49
SPTAN1-207ENST00000476825 NEUROD2Q15784 382 aa11.98□□□□□ -0.49
SPTAN1-207ENST00000476825 PIGBQ92521 554 aa11.98□□□□□ -0.49
SPTAN1-207ENST00000476825 RNF39Q9H2S5 420 aa11.98□□□□□ -0.49
SPTAN1-207ENST00000476825 C4AP0C0L4 1744 aa11.97□□□□□ -0.49
SPTAN1-207ENST00000476825 WWC1Q8IX03 1113 aa11.97□□□□□ -0.49
SPTAN1-207ENST00000476825 RTF1Q92541 710 aaKnown RBP11.97□□□□□ -0.49
SPTAN1-207ENST00000476825 UPF1Q92900 1129 aaKnown RBP eCLIP11.97□□□□□ -0.49
SPTAN1-207ENST00000476825 TMOD3Q9NYL9 352 aa11.97□□□□□ -0.49
SPTAN1-207ENST00000476825 PALLDQ8WX93 1383 aa11.96□□□□□ -0.49
SPTAN1-207ENST00000476825 CABP4P57796 275 aa11.96□□□□□ -0.49
SPTAN1-207ENST00000476825 NGEFQ8N5V2 710 aa11.96□□□□□ -0.49
SPTAN1-207ENST00000476825 NFATC2IPQ8NCF5 419 aa11.96□□□□□ -0.49
SPTAN1-207ENST00000476825 CACNA1FO60840 1977 aa11.96□□□□□ -0.5
SPTAN1-207ENST00000476825 TEFQ10587 303 aa11.95□□□□□ -0.5
SPTAN1-207ENST00000476825 SYTL4Q96C24 671 aaPredicted RBP11.95□□□□□ -0.5
SPTAN1-207ENST00000476825 ATG3Q9NT62 314 aa11.95□□□□□ -0.5
SPTAN1-207ENST00000476825 ZNF853P0CG23 659 aa11.94□□□□□ -0.5
SPTAN1-207ENST00000476825 ASAP1Q9ULH1 1129 aa11.94□□□□□ -0.5
SPTAN1-207ENST00000476825 BCORQ6W2J9 1755 aa11.94□□□□□ -0.5
SPTAN1-207ENST00000476825 HEG1Q9ULI3 1381 aa11.93□□□□□ -0.5
SPTAN1-207ENST00000476825 IL16Q14005 1332 aa11.93□□□□□ -0.5
SPTAN1-207ENST00000476825 CASZ1Q86V15 1759 aa11.93□□□□□ -0.5
SPTAN1-207ENST00000476825 CCDC125Q86Z20 511 aa11.93□□□□□ -0.5
SPTAN1-207ENST00000476825 CHL1O00533 1208 aa11.92□□□□□ -0.5
SPTAN1-207ENST00000476825 PLSCR1O15162 318 aa11.92□□□□□ -0.5
SPTAN1-207ENST00000476825 KCNQ3O43525 872 aa11.92□□□□□ -0.5
SPTAN1-207ENST00000476825 SLC39A6Q13433 755 aa11.92□□□□□ -0.5
SPTAN1-207ENST00000476825 TAF7Q15545 349 aaPredicted RBP11.92□□□□□ -0.5
SPTAN1-207ENST00000476825 WDR63Q8IWG1 891 aa11.92□□□□□ -0.5
SPTAN1-207ENST00000476825 SLC4A9Q96Q91 983 aa11.92□□□□□ -0.5
SPTAN1-207ENST00000476825 IFT57Q9NWB7 429 aa11.92□□□□□ -0.5
SPTAN1-207ENST00000476825 BABAM1Q9NWV8 329 aa11.92□□□□□ -0.5
SPTAN1-207ENST00000476825 SALL2Q9Y467 1007 aaPredicted RBP11.92□□□□□ -0.5
SPTAN1-207ENST00000476825 COL24A1Q17RW2 1714 aa11.91□□□□□ -0.5
SPTAN1-207ENST00000476825 ZBED9Q6R2W3 1325 aa11.91□□□□□ -0.5
SPTAN1-207ENST00000476825 SCN7AQ01118 1682 aa11.91□□□□□ -0.5
SPTAN1-207ENST00000476825 BTBD11A6QL63 1104 aa11.91□□□□□ -0.5
SPTAN1-207ENST00000476825 APBA3O96018 575 aa11.91□□□□□ -0.5
SPTAN1-207ENST00000476825 HNRNPUQ00839 825 aaKnown RBP eCLIP11.91□□□□□ -0.5
SPTAN1-207ENST00000476825 ZNF790Q6PG37 636 aa11.91□□□□□ -0.5
SPTAN1-207ENST00000476825 DEFB132Q7Z7B7 95 aa11.91□□□□□ -0.5
SPTAN1-207ENST00000476825 PROM2Q8N271 834 aa11.91□□□□□ -0.5
SPTAN1-207ENST00000476825 SMARCC1Q92922 1105 aaPredicted RBP11.91□□□□□ -0.5
SPTAN1-207ENST00000476825 CFAP44Q96MT7 982 aa11.91□□□□□ -0.5
SPTAN1-207ENST00000476825 CAMKK2Q96RR4 588 aa11.91□□□□□ -0.5
SPTAN1-207ENST00000476825 SPINK5Q9NQ38 1064 aaPredicted RBP11.91□□□□□ -0.5
SPTAN1-207ENST00000476825 CALD1Q05682 793 aaKnown RBP11.9□□□□□ -0.5
SPTAN1-207ENST00000476825 ZNF496Q96IT1 587 aaPredicted RBP11.9□□□□□ -0.5
SPTAN1-207ENST00000476825 MBIPQ9NS73 344 aa11.9□□□□□ -0.5
SPTAN1-207ENST00000476825 MIS18AQ9NYP9 233 aa11.9□□□□□ -0.5
SPTAN1-207ENST00000476825 ANKRD36CQ5JPF3 1778 aa11.9□□□□□ -0.51
SPTAN1-207ENST00000476825 FANCIQ9NVI1 1328 aa11.89□□□□□ -0.51
SPTAN1-207ENST00000476825 BAG6P46379 1132 aa11.89□□□□□ -0.51
SPTAN1-207ENST00000476825 GNAI1P63096 354 aa11.89□□□□□ -0.51
SPTAN1-207ENST00000476825 EN1Q05925 392 aaPredicted RBP11.89□□□□□ -0.51
SPTAN1-207ENST00000476825 EZH2Q15910 746 aaKnown RBP11.89□□□□□ -0.51
SPTAN1-207ENST00000476825 TXNRD1Q16881 649 aa11.89□□□□□ -0.51
SPTAN1-207ENST00000476825 LRRC4BQ9NT99 713 aa11.89□□□□□ -0.51
SPTAN1-207ENST00000476825 N4BP2Q86UW6 1770 aaPredicted RBP11.89□□□□□ -0.51
SPTAN1-207ENST00000476825 ARFGEF2Q9Y6D5 1785 aa11.88□□□□□ -0.51
SPTAN1-207ENST00000476825 LOC102724428A0A0B4J2F2 783 aa11.88□□□□□ -0.51
SPTAN1-207ENST00000476825 SIK1P57059 783 aa11.88□□□□□ -0.51
SPTAN1-207ENST00000476825 EIF4A1P60842 406 aaKnown RBP11.88□□□□□ -0.51
SPTAN1-207ENST00000476825 ITPK1Q13572 414 aa11.88□□□□□ -0.51
SPTAN1-207ENST00000476825 TSPYL4Q9UJ04 414 aa11.88□□□□□ -0.51
SPTAN1-207ENST00000476825 SF3B2Q13435 895 aaKnown RBP11.87□□□□□ -0.51
SPTAN1-207ENST00000476825 SLC27A3Q5K4L6 730 aa11.87□□□□□ -0.51
SPTAN1-207ENST00000476825 TRMT2AQ8IZ69 625 aaKnown RBP11.87□□□□□ -0.51
SPTAN1-207ENST00000476825 TTC5Q8N0Z6 440 aa11.87□□□□□ -0.51
SPTAN1-207ENST00000476825 VSIG10Q8N0Z9 540 aa11.87□□□□□ -0.51
SPTAN1-207ENST00000476825 TSR2Q969E8 191 aaKnown RBP11.87□□□□□ -0.51
SPTAN1-207ENST00000476825 CDCA7LQ96GN5 454 aa11.87□□□□□ -0.51
SPTAN1-207ENST00000476825 NUP98P52948 1817 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms