RNA–Protein interactions for RNA: ENST00000476743.5

MSL3-213, Transcript of MSL complex subunit 3, humanhuman

TSL 4

Gene MSL3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-213ENST00000476743 SLC16A10Q8TF71 515 aa18.43■□□□□ 0.54
MSL3-213ENST00000476743 SGIP1Q9BQI5 828 aa18.43■□□□□ 0.54
MSL3-213ENST00000476743 NUDCQ9Y266 331 aa18.43■□□□□ 0.54
MSL3-213ENST00000476743 UBR3Q6ZT12 1888 aa18.43■□□□□ 0.54
MSL3-213ENST00000476743 RSPH6AQ9H0K4 717 aa18.42■□□□□ 0.54
MSL3-213ENST00000476743 TFCP2L1Q9NZI6 479 aa18.42■□□□□ 0.54
MSL3-213ENST00000476743 COL5A3P25940 1745 aaPredicted RBP18.41■□□□□ 0.54
MSL3-213ENST00000476743 DDX10Q13206 875 aaKnown RBP18.41■□□□□ 0.54
MSL3-213ENST00000476743 RNMTO43148 476 aaKnown RBP18.4■□□□□ 0.54
MSL3-213ENST00000476743 NFATC2IPQ8NCF5 419 aa18.4■□□□□ 0.54
MSL3-213ENST00000476743 ITPK1Q13572 414 aa18.39■□□□□ 0.53
MSL3-213ENST00000476743 RALBP1Q15311 655 aa18.39■□□□□ 0.53
MSL3-213ENST00000476743 LINC00116Q8NCU8 138 aa18.39■□□□□ 0.53
MSL3-213ENST00000476743 GAS2L2Q8NHY3 880 aa18.39■□□□□ 0.53
MSL3-213ENST00000476743 SLC4A9Q96Q91 983 aa18.39■□□□□ 0.53
MSL3-213ENST00000476743 SLC52A2Q9HAB3 445 aa18.39■□□□□ 0.53
MSL3-213ENST00000476743 LGR6Q9HBX8 967 aa18.39■□□□□ 0.53
MSL3-213ENST00000476743 ATF5Q9Y2D1 282 aaPredicted RBP18.39■□□□□ 0.53
MSL3-213ENST00000476743 SIPA1L3O60292 1781 aaPredicted RBP18.38■□□□□ 0.53
MSL3-213ENST00000476743 FCHSD2O94868 740 aa18.38■□□□□ 0.53
MSL3-213ENST00000476743 PRKAR2BP31323 418 aa18.38■□□□□ 0.53
MSL3-213ENST00000476743 COL23A1Q86Y22 540 aaPredicted RBP18.38■□□□□ 0.53
MSL3-213ENST00000476743 MAP3K5Q99683 1374 aa18.38■□□□□ 0.53
MSL3-213ENST00000476743 U2AF1L5P0DN76 240 aaPredicted RBP18.37■□□□□ 0.53
MSL3-213ENST00000476743 ATP6V1AP38606 617 aa18.37■□□□□ 0.53
MSL3-213ENST00000476743 U2AF1Q01081 240 aaKnown RBP eCLIP18.37■□□□□ 0.53
MSL3-213ENST00000476743 FLAD1Q8NFF5 587 aa18.37■□□□□ 0.53
MSL3-213ENST00000476743 PHACTR3Q96KR7 559 aa18.37■□□□□ 0.53
MSL3-213ENST00000476743 PPP1R1BQ9UD71 204 aaPredicted RBP18.37■□□□□ 0.53
MSL3-213ENST00000476743 TJP1Q07157 1748 aa18.37■□□□□ 0.53
MSL3-213ENST00000476743 AK7Q96M32 723 aa18.36■□□□□ 0.53
MSL3-213ENST00000476743 UBR2Q8IWV8 1755 aa18.35■□□□□ 0.53
MSL3-213ENST00000476743 GNAT3A8MTJ3 354 aa18.35■□□□□ 0.53
MSL3-213ENST00000476743 AMIGO3Q86WK7 504 aa18.35■□□□□ 0.53
MSL3-213ENST00000476743 KCPQ6ZWJ8 1503 aa18.34■□□□□ 0.53
MSL3-213ENST00000476743 CEMIPQ8WUJ3 1361 aa18.34■□□□□ 0.53
MSL3-213ENST00000476743 SSFA2P28290 1259 aa18.34■□□□□ 0.53
MSL3-213ENST00000476743 MYH14Q7Z406 1995 aaKnown RBP18.33■□□□□ 0.53
MSL3-213ENST00000476743 CNTNAP4Q9C0A0 1308 aa18.33■□□□□ 0.53
MSL3-213ENST00000476743 RC3H1Q5TC82 1133 aaKnown RBP18.33■□□□□ 0.52
MSL3-213ENST00000476743 IL17REQ8NFR9 667 aa18.33■□□□□ 0.52
MSL3-213ENST00000476743 RBM42Q9BTD8 480 aaKnown RBP18.33■□□□□ 0.52
MSL3-213ENST00000476743 ARXQ96QS3 562 aa18.32■□□□□ 0.52
MSL3-213ENST00000476743 MYBBP1AQ9BQG0 1328 aaKnown RBP18.31■□□□□ 0.52
MSL3-213ENST00000476743 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.31■□□□□ 0.52
MSL3-213ENST00000476743 GNPATO15228 680 aa18.3■□□□□ 0.52
MSL3-213ENST00000476743 PTCD1O75127 700 aaKnown RBP18.3■□□□□ 0.52
MSL3-213ENST00000476743 POLD1P28340 1107 aa18.29■□□□□ 0.52
MSL3-213ENST00000476743 PLEKHF1Q96S99 279 aa18.29■□□□□ 0.52
MSL3-213ENST00000476743 DLG5Q8TDM6 1919 aa18.29■□□□□ 0.52
MSL3-213ENST00000476743 MSH5O43196 834 aa18.28■□□□□ 0.52
MSL3-213ENST00000476743 HTATSF1O43719 755 aaKnown RBP18.28■□□□□ 0.52
MSL3-213ENST00000476743 SLC39A6Q13433 755 aa18.28■□□□□ 0.52
MSL3-213ENST00000476743 FHDC1Q9C0D6 1143 aaPredicted RBP18.28■□□□□ 0.52
MSL3-213ENST00000476743 C4AP0C0L4 1744 aa18.27■□□□□ 0.52
MSL3-213ENST00000476743 RPS6KA4O75676 772 aa18.27■□□□□ 0.52
MSL3-213ENST00000476743 PHF14O94880 888 aa18.27■□□□□ 0.52
MSL3-213ENST00000476743 ADRA2BP18089 450 aa18.27■□□□□ 0.52
MSL3-213ENST00000476743 TEFQ10587 303 aa18.27■□□□□ 0.52
MSL3-213ENST00000476743 SMIM5Q71RC9 77 aa18.27■□□□□ 0.52
MSL3-213ENST00000476743 VSIG10Q8N0Z9 540 aa18.27■□□□□ 0.52
MSL3-213ENST00000476743 SYT17Q9BSW7 474 aa18.27■□□□□ 0.52
MSL3-213ENST00000476743 PRKRIP1Q9H875 184 aaPredicted RBP18.27■□□□□ 0.52
MSL3-213ENST00000476743 RTCBQ9Y3I0 505 aaKnown RBP18.26■□□□□ 0.51
MSL3-213ENST00000476743 CRKLP46109 303 aaKnown RBP18.25■□□□□ 0.51
MSL3-213ENST00000476743 MSL1Q68DK7 614 aa18.24■□□□□ 0.51
MSL3-213ENST00000476743 ZNF790Q6PG37 636 aa18.24■□□□□ 0.51
MSL3-213ENST00000476743 DNAJC10Q8IXB1 793 aa18.24■□□□□ 0.51
MSL3-213ENST00000476743 PNNQ9H307 717 aaKnown RBP18.24■□□□□ 0.51
MSL3-213ENST00000476743 CYP19A1P11511 503 aaPredicted RBP18.23■□□□□ 0.51
MSL3-213ENST00000476743 TRAPPC3LQ5T215 181 aa18.23■□□□□ 0.51
MSL3-213ENST00000476743 INTS5Q6P9B9 1019 aaKnown RBP18.23■□□□□ 0.51
MSL3-213ENST00000476743 TTC5Q8N0Z6 440 aa18.23■□□□□ 0.51
MSL3-213ENST00000476743 ARHGEF1Q92888 912 aaKnown RBP18.23■□□□□ 0.51
MSL3-213ENST00000476743 NEFMP07197 916 aa18.22■□□□□ 0.51
MSL3-213ENST00000476743 MCM10Q7L590 875 aa18.22■□□□□ 0.51
MSL3-213ENST00000476743 RTF1Q92541 710 aaKnown RBP18.22■□□□□ 0.51
MSL3-213ENST00000476743 HEG1Q9ULI3 1381 aa18.21■□□□□ 0.51
MSL3-213ENST00000476743 ZNF316A6NFI3 1004 aaPredicted RBP18.21■□□□□ 0.51
MSL3-213ENST00000476743 NFE2L2Q16236 605 aa18.21■□□□□ 0.51
MSL3-213ENST00000476743 ZNF496Q96IT1 587 aaPredicted RBP18.21■□□□□ 0.51
MSL3-213ENST00000476743 CCDC87Q9NVE4 849 aa18.21■□□□□ 0.51
MSL3-213ENST00000476743 SOS1Q07889 1333 aaPredicted RBP18.2■□□□□ 0.5
MSL3-213ENST00000476743 BTBD11A6QL63 1104 aa18.19■□□□□ 0.5
MSL3-213ENST00000476743 DCTN1Q14203 1278 aa18.19■□□□□ 0.5
MSL3-213ENST00000476743 KDM3BQ7LBC6 1761 aa18.19■□□□□ 0.5
MSL3-213ENST00000476743 MAPK8IP3Q9UPT6 1336 aa18.19■□□□□ 0.5
MSL3-213ENST00000476743 GYS1P13807 737 aa18.18■□□□□ 0.5
MSL3-213ENST00000476743 RFC4P35249 363 aa18.18■□□□□ 0.5
MSL3-213ENST00000476743 FMNL2Q96PY5 1086 aa18.18■□□□□ 0.5
MSL3-213ENST00000476743 TEX13AQ9BXU3 409 aaPredicted RBP18.18■□□□□ 0.5
MSL3-213ENST00000476743 KIF13BQ9NQT8 1826 aa18.17■□□□□ 0.5
MSL3-213ENST00000476743 KCNQ3O43525 872 aa18.17■□□□□ 0.5
MSL3-213ENST00000476743 NLGN1Q8N2Q7 840 aa18.17■□□□□ 0.5
MSL3-213ENST00000476743 ZBTB1Q9Y2K1 713 aa18.17■□□□□ 0.5
MSL3-213ENST00000476743 CD2APQ9Y5K6 639 aa18.17■□□□□ 0.5
MSL3-213ENST00000476743 USP42Q9H9J4 1324 aaKnown RBP18.17■□□□□ 0.5
MSL3-213ENST00000476743 STARD3NLO95772 234 aa18.16■□□□□ 0.5
MSL3-213ENST00000476743 TAF7Q15545 349 aaPredicted RBP18.16■□□□□ 0.5
MSL3-213ENST00000476743 MMP10P09238 476 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms