RNA–Protein interactions for RNA: ENST00000476641.2

CHD6-207, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-207ENST00000476641 KIFC2Q96AC6 838 aa11.92□□□□□ -0.5
CHD6-207ENST00000476641 RIMS2Q9UQ26 1411 aa11.92□□□□□ -0.5
CHD6-207ENST00000476641 GCC2Q8IWJ2 1684 aa11.91□□□□□ -0.5
CHD6-207ENST00000476641 ALKQ9UM73 1620 aa11.91□□□□□ -0.5
CHD6-207ENST00000476641 IRF6O14896 467 aa11.91□□□□□ -0.5
CHD6-207ENST00000476641 ALDH1A1P00352 501 aa11.91□□□□□ -0.5
CHD6-207ENST00000476641 GUCA2AQ02747 115 aa11.91□□□□□ -0.5
CHD6-207ENST00000476641 HFM1A2PYH4 1435 aa11.91□□□□□ -0.5
CHD6-207ENST00000476641 TMEM131LA2VDJ0 1609 aa11.9□□□□□ -0.5
CHD6-207ENST00000476641 TRIM52Q96A61 297 aa11.9□□□□□ -0.5
CHD6-207ENST00000476641 BCANQ96GW7 911 aa11.9□□□□□ -0.5
CHD6-207ENST00000476641 PPP1R15AO75807 674 aaPredicted RBP11.89□□□□□ -0.51
CHD6-207ENST00000476641 JUNDP17535 347 aa11.89□□□□□ -0.51
CHD6-207ENST00000476641 MYO5BQ9ULV0 1848 aa11.88□□□□□ -0.51
CHD6-207ENST00000476641 HSPA1LP34931 641 aa11.88□□□□□ -0.51
CHD6-207ENST00000476641 SYMPKQ92797 1274 aaKnown RBP11.88□□□□□ -0.51
CHD6-207ENST00000476641 KDM5AP29375 1690 aaKnown RBP11.87□□□□□ -0.51
CHD6-207ENST00000476641 PLEKHG1Q9ULL1 1385 aa11.87□□□□□ -0.51
CHD6-207ENST00000476641 TOM1O60784 492 aa11.86□□□□□ -0.51
CHD6-207ENST00000476641 KCNA6P17658 529 aa11.86□□□□□ -0.51
CHD6-207ENST00000476641 TMEM94Q12767 1356 aa11.86□□□□□ -0.51
CHD6-207ENST00000476641 ADAMTS13Q76LX8 1427 aa11.86□□□□□ -0.51
CHD6-207ENST00000476641 MINK1Q8N4C8 1332 aaPredicted RBP11.86□□□□□ -0.51
CHD6-207ENST00000476641 ILDR2Q71H61 639 aa11.85□□□□□ -0.51
CHD6-207ENST00000476641 EHBP1Q8NDI1 1231 aa11.84□□□□□ -0.51
CHD6-207ENST00000476641 CCDC102AQ96A19 550 aa11.84□□□□□ -0.51
CHD6-207ENST00000476641 NUDT12Q9BQG2 462 aa11.84□□□□□ -0.51
CHD6-207ENST00000476641 CLTCL1P53675 1640 aa11.84□□□□□ -0.51
CHD6-207ENST00000476641 ZNF326Q5BKZ1 582 aaKnown RBP11.83□□□□□ -0.52
CHD6-207ENST00000476641 PTCRAQ6ISU1 281 aaPredicted RBP11.83□□□□□ -0.52
CHD6-207ENST00000476641 RETREG3Q86VR2 466 aa11.83□□□□□ -0.52
CHD6-207ENST00000476641 PROSER2Q86WR7 435 aaPredicted RBP11.83□□□□□ -0.52
CHD6-207ENST00000476641 GPCPD1Q9NPB8 672 aa11.83□□□□□ -0.52
CHD6-207ENST00000476641 SPHKAPQ2M3C7 1700 aa11.83□□□□□ -0.52
CHD6-207ENST00000476641 DISP3Q9P2K9 1392 aa11.82□□□□□ -0.52
CHD6-207ENST00000476641 TRPM2O94759 1503 aa11.82□□□□□ -0.52
CHD6-207ENST00000476641 TULP1O00294 542 aaPredicted RBP11.82□□□□□ -0.52
CHD6-207ENST00000476641 SIAH2O43255 324 aa11.82□□□□□ -0.52
CHD6-207ENST00000476641 NUTM1Q86Y26 1132 aa11.82□□□□□ -0.52
CHD6-207ENST00000476641 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.82□□□□□ -0.52
CHD6-207ENST00000476641 FAM217BQ9NTX9 383 aaPredicted RBP11.82□□□□□ -0.52
CHD6-207ENST00000476641 PTPRUQ92729 1446 aa11.81□□□□□ -0.52
CHD6-207ENST00000476641 BMP1P13497 986 aa11.81□□□□□ -0.52
CHD6-207ENST00000476641 CLCN1P35523 988 aa11.81□□□□□ -0.52
CHD6-207ENST00000476641 SLC16A10Q8TF71 515 aa11.81□□□□□ -0.52
CHD6-207ENST00000476641 XIRP1Q702N8 1843 aaKnown RBP11.81□□□□□ -0.52
CHD6-207ENST00000476641 NWD1Q149M9 1564 aa11.8□□□□□ -0.52
CHD6-207ENST00000476641 HAP1P54257 671 aaPredicted RBP11.8□□□□□ -0.52
CHD6-207ENST00000476641 TBX22Q9Y458 520 aa11.8□□□□□ -0.52
CHD6-207ENST00000476641 WASF2Q9Y6W5 498 aa11.8□□□□□ -0.52
CHD6-207ENST00000476641 TRIM46Q7Z4K8 759 aa11.79□□□□□ -0.52
CHD6-207ENST00000476641 MPHOSPH9Q99550 1183 aa11.79□□□□□ -0.52
CHD6-207ENST00000476641 NXF1Q9UBU9 619 aaKnown RBP11.79□□□□□ -0.52
CHD6-207ENST00000476641 METP08581 1390 aa11.79□□□□□ -0.52
CHD6-207ENST00000476641 NKTRP30414 1462 aaKnown RBP11.78□□□□□ -0.52
CHD6-207ENST00000476641 CAPN5O15484 640 aaPredicted RBP11.78□□□□□ -0.52
CHD6-207ENST00000476641 KDM2AQ9Y2K7 1162 aa11.78□□□□□ -0.52
CHD6-207ENST00000476641 NEXMIFQ5QGS0 1516 aa11.77□□□□□ -0.52
CHD6-207ENST00000476641 FDX1P10109 184 aa11.77□□□□□ -0.53
CHD6-207ENST00000476641 KRI1Q8N9T8 703 aaKnown RBP11.77□□□□□ -0.53
CHD6-207ENST00000476641 AMOTL2Q9Y2J4 779 aa11.77□□□□□ -0.53
CHD6-207ENST00000476641 NRXN3Q9Y4C0 1643 aa11.77□□□□□ -0.53
CHD6-207ENST00000476641 SETD5Q9C0A6 1442 aa11.77□□□□□ -0.53
CHD6-207ENST00000476641 C6orf229H3BNL8 230 aa11.76□□□□□ -0.53
CHD6-207ENST00000476641 SOCS7O14512 581 aa11.76□□□□□ -0.53
CHD6-207ENST00000476641 MS4A1P11836 297 aa11.76□□□□□ -0.53
CHD6-207ENST00000476641 SH3BP2P78314 561 aa11.76□□□□□ -0.53
CHD6-207ENST00000476641 PCDHGC3Q9UN70 934 aa11.76□□□□□ -0.53
CHD6-207ENST00000476641 RAB3GAP2Q9H2M9 1393 aa11.76□□□□□ -0.53
CHD6-207ENST00000476641 CCNYL3P0C7X3 344 aa11.75□□□□□ -0.53
CHD6-207ENST00000476641 GMPRP36959 345 aa11.74□□□□□ -0.53
CHD6-207ENST00000476641 RGL3Q3MIN7 710 aa11.74□□□□□ -0.53
CHD6-207ENST00000476641 C14orf37Q86TY3 774 aa11.74□□□□□ -0.53
CHD6-207ENST00000476641 MSH6P52701 1360 aa11.74□□□□□ -0.53
CHD6-207ENST00000476641 SETBP1Q9Y6X0 1596 aa11.74□□□□□ -0.53
CHD6-207ENST00000476641 CHD2O14647 1828 aaKnown RBP11.74□□□□□ -0.53
CHD6-207ENST00000476641 DIP2AQ14689 1571 aa11.73□□□□□ -0.53
CHD6-207ENST00000476641 FAM135BQ49AJ0 1406 aa11.72□□□□□ -0.53
CHD6-207ENST00000476641 PIK3R4Q99570 1358 aa11.72□□□□□ -0.53
CHD6-207ENST00000476641 ADGRF5Q8IZF2 1346 aa11.72□□□□□ -0.53
CHD6-207ENST00000476641 FAM181BA6NEQ2 426 aa11.72□□□□□ -0.53
CHD6-207ENST00000476641 LINC01559Q495D7 138 aa11.72□□□□□ -0.53
CHD6-207ENST00000476641 IRF7Q92985 503 aa11.72□□□□□ -0.53
CHD6-207ENST00000476641 SLAIN2Q9P270 581 aa11.72□□□□□ -0.53
CHD6-207ENST00000476641 CCDC144AA2RUR9 1427 aa11.71□□□□□ -0.53
CHD6-207ENST00000476641 SPATA31E1Q6ZUB1 1445 aa11.71□□□□□ -0.53
CHD6-207ENST00000476641 VEGFBP49765 207 aa11.71□□□□□ -0.53
CHD6-207ENST00000476641 PTPRNQ16849 979 aa11.71□□□□□ -0.53
CHD6-207ENST00000476641 NPAS3Q8IXF0 933 aa11.71□□□□□ -0.53
CHD6-207ENST00000476641 UNC93B1Q9H1C4 597 aa11.71□□□□□ -0.53
CHD6-207ENST00000476641 MED1Q15648 1581 aaPredicted RBP11.71□□□□□ -0.54
CHD6-207ENST00000476641 TLL2Q9Y6L7 1015 aa11.7□□□□□ -0.54
CHD6-207ENST00000476641 XRN1Q8IZH2 1706 aaKnown RBP11.69□□□□□ -0.54
CHD6-207ENST00000476641 ROBO1Q9Y6N7 1651 aa11.69□□□□□ -0.54
CHD6-207ENST00000476641 KIF1BO60333 1816 aa11.69□□□□□ -0.54
CHD6-207ENST00000476641 ROBO2Q9HCK4 1378 aa11.68□□□□□ -0.54
CHD6-207ENST00000476641 ZSCAN1Q8NBB4 408 aa11.68□□□□□ -0.54
CHD6-207ENST00000476641 BAP1Q92560 729 aa11.68□□□□□ -0.54
CHD6-207ENST00000476641 C19orf44Q9H6X5 657 aa11.68□□□□□ -0.54
CHD6-207ENST00000476641 EVA1BQ9NVM1 165 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms