RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 ZKSCAN5Q9Y2L8 839 aa5.06□□□□□ -1.6
CD55-208ENST00000476590 CUX2O14529 1486 aa5.06□□□□□ -1.6
CD55-208ENST00000476590 CCDC189A1A4V9 331 aa5.05□□□□□ -1.6
CD55-208ENST00000476590 ANKRD62A6NC57 917 aa5.05□□□□□ -1.6
CD55-208ENST00000476590 NRDCO43847 1150 aa5.05□□□□□ -1.6
CD55-208ENST00000476590 LRCH2Q5VUJ6 765 aa5.05□□□□□ -1.6
CD55-208ENST00000476590 ANKRD23Q86SG2 305 aa5.05□□□□□ -1.6
CD55-208ENST00000476590 PAIP2Q9BPZ3 127 aaKnown RBP5.05□□□□□ -1.6
CD55-208ENST00000476590 KNSTRNQ9Y448 316 aa5.05□□□□□ -1.6
CD55-208ENST00000476590 ZC3H4Q9UPT8 1303 aaKnown RBP5.05□□□□□ -1.6
CD55-208ENST00000476590 KLHL33A6NCF5 533 aa5.05□□□□□ -1.6
CD55-208ENST00000476590 NASPP49321 788 aaPredicted RBP5.05□□□□□ -1.6
CD55-208ENST00000476590 TERF2Q15554 542 aa5.05□□□□□ -1.6
CD55-208ENST00000476590 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.05□□□□□ -1.61e-6■■■■■ 126.8
CD55-208ENST00000476590 PPP1R1BQ9UD71 204 aaPredicted RBP5.05□□□□□ -1.6
CD55-208ENST00000476590 SUFUQ9UMX1 484 aa5.05□□□□□ -1.6
CD55-208ENST00000476590 PPME1Q9Y570 386 aa5.05□□□□□ -1.6
CD55-208ENST00000476590 IVNS1ABPQ9Y6Y0 642 aa5.05□□□□□ -1.6
CD55-208ENST00000476590 LIG1P18858 919 aa5.04□□□□□ -1.6
CD55-208ENST00000476590 HDAC1Q13547 482 aaPredicted RBP5.04□□□□□ -1.6
CD55-208ENST00000476590 SETDB1Q15047 1291 aa5.04□□□□□ -1.6
CD55-208ENST00000476590 C8orf34Q49A92 452 aa5.04□□□□□ -1.6
CD55-208ENST00000476590 SWT1Q5T5J6 900 aaKnown RBP5.04□□□□□ -1.6
CD55-208ENST00000476590 GIMAP6Q6P9H5 292 aa5.04□□□□□ -1.6
CD55-208ENST00000476590 CCDC91Q7Z6B0 441 aa5.04□□□□□ -1.6
CD55-208ENST00000476590 JMYQ8N9B5 988 aa5.04□□□□□ -1.6
CD55-208ENST00000476590 MRRFQ96E11 262 aaKnown RBP5.04□□□□□ -1.6
CD55-208ENST00000476590 SLKQ9H2G2 1235 aaPredicted RBP5.04□□□□□ -1.6
CD55-208ENST00000476590 CXorf56Q9H5V9 222 aa5.04□□□□□ -1.6
CD55-208ENST00000476590 KTN1Q86UP2 1357 aaKnown RBP5.04□□□□□ -1.6
CD55-208ENST00000476590 GOLGA6L6A8MZA4 724 aa5.04□□□□□ -1.6
CD55-208ENST00000476590 HSP90AB1P08238 724 aaKnown RBP5.04□□□□□ -1.6
CD55-208ENST00000476590 U2AF2P26368 475 aaKnown RBP eCLIP5.04□□□□□ -1.62e-15■■■■■ 31.7
CD55-208ENST00000476590 COPS2P61201 443 aa5.04□□□□□ -1.6
CD55-208ENST00000476590 FOXK1P85037 733 aa5.04□□□□□ -1.6
CD55-208ENST00000476590 TRDNQ13061 729 aa5.04□□□□□ -1.6
CD55-208ENST00000476590 SKOR2Q2VWA4 1001 aaPredicted RBP5.04□□□□□ -1.6
CD55-208ENST00000476590 FOXD4L6Q3SYB3 417 aaPredicted RBP5.04□□□□□ -1.6
CD55-208ENST00000476590 FOXD4L3Q6VB84 417 aaPredicted RBP5.04□□□□□ -1.6
CD55-208ENST00000476590 ARMCX6Q7L4S7 300 aa5.04□□□□□ -1.6
CD55-208ENST00000476590 EXOC6Q8TAG9 804 aa5.04□□□□□ -1.6
CD55-208ENST00000476590 SUGT1Q9Y2Z0 365 aa5.04□□□□□ -1.6
CD55-208ENST00000476590 SCAPERQ9BY12 1400 aa5.04□□□□□ -1.6
CD55-208ENST00000476590 IBTKQ9P2D0 1353 aaPredicted RBP5.03□□□□□ -1.6
CD55-208ENST00000476590 IPO8O15397 1037 aaKnown RBP5.03□□□□□ -1.6
CD55-208ENST00000476590 COL9A1P20849 921 aa5.03□□□□□ -1.6
CD55-208ENST00000476590 CASQ1P31415 396 aa5.03□□□□□ -1.6
CD55-208ENST00000476590 RRP1P56182 461 aaKnown RBP5.03□□□□□ -1.6
CD55-208ENST00000476590 RAD51AP2Q09MP3 1159 aa5.03□□□□□ -1.6
CD55-208ENST00000476590 BIRC2Q13490 618 aa5.03□□□□□ -1.6
CD55-208ENST00000476590 SKIV2LQ15477 1246 aaKnown RBP5.03□□□□□ -1.6
CD55-208ENST00000476590 C11orf91Q3C1V1 193 aa5.03□□□□□ -1.6
CD55-208ENST00000476590 ZC3H12AQ5D1E8 599 aaKnown RBP5.03□□□□□ -1.6
CD55-208ENST00000476590 DNAJC21Q5F1R6 531 aaKnown RBP5.03□□□□□ -1.6
CD55-208ENST00000476590 GAS2L3Q86XJ1 694 aa5.03□□□□□ -1.6
CD55-208ENST00000476590 PNISRQ8TF01 805 aaKnown RBP5.03□□□□□ -1.6
CD55-208ENST00000476590 ANKRD7Q92527 254 aa5.03□□□□□ -1.6
CD55-208ENST00000476590 NOL10Q9BSC4 688 aaKnown RBP5.03□□□□□ -1.6
CD55-208ENST00000476590 HIRIP3Q9BW71 556 aaPredicted RBP5.03□□□□□ -1.6
CD55-208ENST00000476590 MAPKBP1O60336 1514 aa5.03□□□□□ -1.6
CD55-208ENST00000476590 RIOK3O14730 519 aaKnown RBP5.02□□□□□ -1.61
CD55-208ENST00000476590 CTAGE5O15320 804 aa5.02□□□□□ -1.61
CD55-208ENST00000476590 GOLGA6L1Q8N7Z2 621 aa5.02□□□□□ -1.61
CD55-208ENST00000476590 FBXO22Q8NEZ5 403 aa5.02□□□□□ -1.61
CD55-208ENST00000476590 MICAL1Q8TDZ2 1067 aa5.02□□□□□ -1.61
CD55-208ENST00000476590 MKL1Q969V6 931 aa5.02□□□□□ -1.61
CD55-208ENST00000476590 DRC1Q96MC2 740 aa5.02□□□□□ -1.61
CD55-208ENST00000476590 RBM27Q9P2N5 1060 aaKnown RBP5.02□□□□□ -1.61
CD55-208ENST00000476590 CCDC39Q9UFE4 941 aa5.02□□□□□ -1.61
CD55-208ENST00000476590 TPD52L2O43399 206 aaKnown RBP5.02□□□□□ -1.61
CD55-208ENST00000476590 TNNT1P13805 278 aa5.02□□□□□ -1.61
CD55-208ENST00000476590 GSCP56915 257 aaPredicted RBP5.02□□□□□ -1.61
CD55-208ENST00000476590 ZMYM1Q5SVZ6 1142 aa5.02□□□□□ -1.61
CD55-208ENST00000476590 SND1Q7KZF4 910 aaKnown RBP eCLIP5.02□□□□□ -1.612e-7■■□□□ 12.1
CD55-208ENST00000476590 PDLIM2Q96JY6 352 aa5.02□□□□□ -1.61
CD55-208ENST00000476590 TSPAN18Q96SJ8 248 aa5.02□□□□□ -1.61
CD55-208ENST00000476590 CHMP5Q9NZZ3 219 aa5.02□□□□□ -1.61
CD55-208ENST00000476590 RSF1Q96T23 1441 aaPredicted RBP5.01□□□□□ -1.61
CD55-208ENST00000476590 H0YHG0 523 aa5.01□□□□□ -1.61
CD55-208ENST00000476590 GOLGA6L22H0YM25 854 aa5.01□□□□□ -1.61
CD55-208ENST00000476590 RAB11FIP3O75154 756 aa5.01□□□□□ -1.61
CD55-208ENST00000476590 COQ9O75208 318 aa5.01□□□□□ -1.61
CD55-208ENST00000476590 IPO7O95373 1038 aaKnown RBP5.01□□□□□ -1.61
CD55-208ENST00000476590 SARNPP82979 210 aaKnown RBP5.01□□□□□ -1.61
CD55-208ENST00000476590 KCNA1Q09470 495 aa5.01□□□□□ -1.61
CD55-208ENST00000476590 DCAF5Q96JK2 942 aa5.01□□□□□ -1.61
CD55-208ENST00000476590 TRERF1Q96PN7 1200 aa5.01□□□□□ -1.61
CD55-208ENST00000476590 TMX1Q9H3N1 280 aa5.01□□□□□ -1.61
CD55-208ENST00000476590 DEF6Q9H4E7 631 aa5.01□□□□□ -1.61
CD55-208ENST00000476590 TOMM22Q9NS69 142 aa5.01□□□□□ -1.61
CD55-208ENST00000476590 JRKLQ9Y4A0 524 aa5.01□□□□□ -1.61
CD55-208ENST00000476590 PAXBP1Q9Y5B6 917 aa5.01□□□□□ -1.61
CD55-208ENST00000476590 MORC2Q9Y6X9 1032 aaPredicted RBP5.01□□□□□ -1.61
CD55-208ENST00000476590 RBM47A0AV96 593 aaKnown RBP5.01□□□□□ -1.61
CD55-208ENST00000476590 ERICH4A6NGS2 130 aa5.01□□□□□ -1.61
CD55-208ENST00000476590 ATP6V1AP38606 617 aa5.01□□□□□ -1.61
CD55-208ENST00000476590 KIAA2012Q0VF49 1180 aa5.01□□□□□ -1.61
CD55-208ENST00000476590 RPAINQ86UA6 219 aa5.01□□□□□ -1.61
CD55-208ENST00000476590 TNPO1Q92973 898 aaKnown RBP5.01□□□□□ -1.61
CD55-208ENST00000476590 MRS2Q9HD23 443 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms